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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000048_pilon:650701..653397- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038629 ID=XLOC_038629|Name=XLOC_038629|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2697bp|location=Sequence derived from alignment at sc0000048_pilon:650701..653397- (Clytia hemisphaerica_ch_hm2_pilon)
CACACTGGTGTTATACGTGCCATGACAGCAAGATGGCCATACGTATTTAG
TGGAGCAGCTGATCACTCAATCAAAGTTTGGGACATCAGAGACAAAGACA
TGAAAAATTCCAAAGGCTGCATTGCCACGTTTGCTGGACACTCTGGTGAT
GTAAGTTTAAGATTATCATACCGGCAACAAAACGTCTTAGATTAAAGAAA
AACAAACACCTTTTAATATCTAAAGAATTTCAAACAATATGCTGAGGTGT
CAAATAATCAATGAACATTAACAAACAAGCAAGCTTCTCTTTCTTAAAGC
TGAAAGCTCTCTAATAGACCAATAATCATTTAATTACTTTTTGTCATTCT
AGATTCATGCACTGTGTTTTGCCAATGGTTATGTGTTCAGTGCCAGTACG
GATAAATCGTTAAAAGTATGGAGTGTGGAAACGTTTCAACTACATAATTC
TGTTGAAGTGAGTAGTAATAAATACTTAAATCTCTTTTTTCCACTTCCAC
TTCACCATTCTTGTTGTCATAGAGACTCTTGGAATCATTTCTGAACTTTT
CTTGTCTAATTTTGATTGTTTGCTTTTCTCTTAGGATGCACATTCAGATA
TCATTGGAGCCCTTGCTTCAACTGGGCGTTACATTTTTAGTGGATCATAC
TCTTCAATAAAGGTGTGATGAATTGATATTCTCTAGTATTTACAAAATTG
GTTTAGTAAGAGTCTGCTAAATTGCGTGGGTTGCGTGGGTGCGTGGGTGC
GTGGGTCAATATTTTTGCGTGGGTCATTATTTTTGCGTGGGTCATATTTT
TTTGCGTGGGTCATATTTTAAATAACAAAAAAAAACAAAATAAAATATGG
TAAATAAACATGATTGGCTAGAAAATATATTACTTATTTCTTCTACATGA
CAGATATTACATAATATTTATTTACTATTTTTATTTCCTAAAGGTTTGAC
ACATAACGTATGCTTTTCACTTGTAGATATGGCGCGCCTCAGACTTAAAG
TTGATGCATACAATATCAGACACTGGGCATTGGATCAGAGCGTTTGCAGT
TGGACCAAACAGGGTATGGTATTGGAATTTCCTCCATGGTTCGGAAATTG
ATAGAATTAAATTTATATGTTTTATATGGTTACAATTAAGGTGCTCTTTT
TTCAAAGTCCATATAAAATCTGGGGGTGGTGTGGTCCTTTTCAAAATTAT
CAAAAATCTGTTAGTATTCATAGTATTCCAGAGTAGCTGCTTGACCCCAA
CTCCTGTTCTAGTAAACATCCCAAGTTGAATATAAAAGCTCAAGATATTG
AATTAAATAAATAAATAAAGAAACCAGTTAAGCTCTGAATATATTTAGTT
TTAACATACTTATCTCTGTTATTAAAATGTTGTGCATTCCAACACAACAT
TATTTGATTCGAAGCTCTATCAGCTCTAATAAATTATCATTAAAAACAGG
ACAAGGTGTACAGTGGATCACACAATGCAGTTAATGTTTGGGAGACAGAA
GAACCATTCCGTTCCGCTGGAACACTCACTCATTCGCATGGTTCAGTGTA
CTCGCTTGCTGCGACCAAAGAATATCTGATATTAGGTAATCACCAATGCC
CCTGCTAACTGCTCCTTTGAACGAAAATGAGAAAGTTTATAGGTTTTACA
TTTTAGTTTTGGAAAATTATGTATACAGATAAAGCTTGAGAGAAATTTGA
ATTTGTTTAGTTAACAGCAATTGCGAATGGGGCAATTTTTGTATTTTATC
ATAATTTGTTTTACTTTGTAGGAACCTACAATCAGAATTCACATTTGTAC
GACATTAACACACTGGAGTATGTTAAAGTACTGACAGGTCATCTTGGTAT
CATCAACTCCTTATTACCATCGCCAAGCGGAAGATTCTTGTTTACAGGAT
CTCATGACCACACCGTACAGGTACTTTTTTCCTAAGATTTTTTTGCAAGC
AAAAGTTTTAGTGATATAGTATGGAACTATGATAAAATCGAATTCCTTTC
ATTTTCCTCATTACCCCATCATAACTCAGATCCTTCTTATTTGGCAATGT
GCAAAAATTAATTCCTGACACTATTTCCTGATTCCATGTGATACAATTAA
TTCTCCATTTAGGCGGGCATAAACTGTATCCTTCCTTCATTTTGACAGAT
TCAGCTTTTGGAAGGTTCGACTTTTGGGCCTCCTTATAAGAGTGAATTTT
TAGAACAATATTTTCATTTAAAAGTCACCTTGATATTTTAGCTTTGGGAT
ATGATGAAGCTTTTGCCAATTCAAGTGTTAAGCCGTCATGAAGGAAGTGT
GAATTGTATGGCATTGTCTGGTGATATGATTTTCACTGGGTCAGAAGATA
AAGAAATCAAGGTGAGGTTTCTTTTTATGGCCAAGCTCGAAATTCTTATT
TACAGGGTGATATCGGGTTTATTTGCTATGATTGTGTCTTTAGCTGAACT
TGCTCCTCAGAGCAGGTTATGTTGTTCATACTATTTAGTAAATCTTATAA
TCCGAAGTAAAAGAGAAACTGTCAGGAAAGGTTCAAAATTTATCAATAAA
ATTCGTGTCAAATGGTAATCAATAAGATTGTTCCTGTTGTAAACATCAAC
AAGGTCACTTTGATGTTATGCTGATTACATTATGTTTCTTTTACAGGTGT
ACATGTACTACCAAGGGTTGGCATCAAAGAACTTGATGGTTGTATAG Coding sequence (CDS) from alignment at sc0000048_pilon:650701..653397- >XLOC_038629 ID=XLOC_038629|Name=XLOC_038629|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000048_pilon:650701..653397- (Clytia hemisphaerica_ch_hm2_pilon)
CACACTGGTGTTATACGTGCCATGACAGCAAGATGGCCATACGTATTTAG
TGGAGCAGCTGATCACTCAATCAAAGTTTGGGACATCAGAGACAAAGACA
TGAAAAATTCCAAAGGCTGCATTGCCACGTTTGCTGGACACTCTGGTGAT
CACACTGGTGTTATACGTGCCATGACAGCAAGATGGCCATACGTATTTAG
TGGAGCAGCTGATCACTCAATCAAAGTTTGGGACATCAGAGACAAAGACA
TGAAAAATTCCAAAGGCTGCATTGCCACGTTTGCTGGACACTCTGGTGAT
ATTCATGCACTGTGTTTTGCCAATGGTTATGTGTTCAGTGCCAGTACGGA
TAAATCGTTAAAAGTATGGAGTGTGGAAACGTTTCAACTACATAATTCTG
TTGAAATTCATGCACTGTGTTTTGCCAATGGTTATGTGTTCAGTGCCAGT
ACGGATAAATCGTTAAAAGTATGGAGTGTGGAAACGTTTCAACTACATAA
TTCTGTTGAAGATGCACATTCAGATATCATTGGAGCCCTTGCTTCAACTG
GGCGTTACATTTTTAGTGGATCATACTCTTCAATAAAGGATGCACATTCA
GATATCATTGGAGCCCTTGCTTCAACTGGGCGTTACATTTTTAGTGGATC
ATACTCTTCAATAAAGATATGGCGCGCCTCAGACTTAAAGTTGATGCATA
CAATATCAGACACTGGGCATTGGATCAGAGCGTTTGCAGTTGGACCAAAC
AGGATATGGCGCGCCTCAGACTTAAAGTTGATGCATACAATATCAGACAC
TGGGCATTGGATCAGAGCGTTTGCAGTTGGACCAAACAGGGACAAGGTGT
ACAGTGGATCACACAATGCAGTTAATGTTTGGGAGACAGAAGAACCATTC
CGTTCCGCTGGAACACTCACTCATTCGCATGGTTCAGTGTACTCGCTTGC
TGCGACCAAAGAATATCTGATATTAGGACAAGGTGTACAGTGGATCACAC
AATGCAGTTAATGTTTGGGAGACAGAAGAACCATTCCGTTCCGCTGGAAC
ACTCACTCATTCGCATGGTTCAGTGTACTCGCTTGCTGCGACCAAAGAAT
ATCTGATATTAGGAACCTACAATCAGAATTCACATTTGTACGACATTAAC
ACACTGGAGTATGTTAAAGTACTGACAGGTCATCTTGGTATCATCAACTC
CTTATTACCATCGCCAAGCGGAAGATTCTTGTTTACAGGATCTCATGACC
ACACCGTACAGGAACCTACAATCAGAATTCACATTTGTACGACATTAACA
CACTGGAGTATGTTAAAGTACTGACAGGTCATCTTGGTATCATCAACTCC
TTATTACCATCGCCAAGCGGAAGATTCTTGTTTACAGGATCTCATGACCA
CACCGTACAGCTTTGGGATATGATGAAGCTTTTGCCAATTCAAGTGTTAA
GCCGTCATGAAGGAAGTGTGAATTGTATGGCATTGTCTGGTGATATGATT
TTCACTGGGTCAGAAGATAAAGAAATCAAGCTTTGGGATATGATGAAGCT
TTTGCCAATTCAAGTGTTAAGCCGTCATGAAGGAAGTGTGAATTGTATGG
CATTGTCTGGTGATATGATTTTCACTGGGTCAGAAGATAAAGAAATCAAG
GTGTACATGTACTACCAAGGGTTGGCATCAAAGAACTTGATGGTTGTATA
GGTGTACATGTACTACCAAGGGTTGGCATCAAAGAACTTGATGGTTGTAT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000048_pilon | genome | sc0000048_pilon:650701..653397 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 826-876:52 |
| Aaloc | 706-825:457 |
| Aaloc | 559-705:925 |
| Aaloc | 421-555:1249 |
| Aaloc | 334-420:1722 |
| Aaloc | 256-333:2114 |
| Aaloc | 151-255:2346 |
| Aaloc | 1-150:2698 |
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