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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:2588501..2592970+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038621 ID=XLOC_038621|Name=XLOC_038621|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4470bp|location=Sequence derived from alignment at sc0000010_pilon:2588501..2592970+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGTCCTGGATAACGAGGGTGGGGCGCACCACCCTCAAGCTAATGG
CGtcgaaaatttcccacccaTAGAGAAACTGTCTACAAAACGTATGAGAA
GGAAGCAAAGTAAATGGACGTTGATCATcacatttttatcttttattttt
atcattattttaatCACGGTTGCTTATTTGGTTTCCAAAGGATTGTTTGT
GCATGAAGATGCTGAAAAGGTaaatacgtttttttattagaaactgAAAG
CCTTTATTTGGACTGAGCCTCGATGTGTTTATTGTTGACAGtattaagct
taaaaaaatgttcttatcgggcgtttttgaaatttattcgCTTAAATTAC
TTTGAGTTAAAGAATGGTTTGGAgccttttaaatgtttttaaaatttttt
tcacctttcttagtttgttcttaatattttggccatcgaagtctcgTGTT
TTTATATACATATCATTTTAGTGGgcatttaatttggcggatgaaagata
tttttagtccaaaacacTATTAAATgagaaaaacctgtttttaggCCTAA
AATAGCACGCATTTGGGGAACGAATACAATAATCTAAATTTGGCGGTGTC
AAATTAAatgttcccgccaaaatttcgtTCTTTATAAGGTAATTTCTATT
TTCGATTGATTTCGTAGGTACCCATCGTTAAGAGCTGTCAAGATGACATG
ACTTGTCGTATAGAAATCGTCGAAACATTACCTAAAGTCTTATCCTATCC
TTCCGGTTCACCTATGCACGCGAGCACACCAGACGTGTGGAAGAAACTAA
CGAAAGTCGCGCGTGAAAGGATTGATATCTTATCGTTTTATTGGACGCTG
AAAAACTTCACTTACGATGAGGCAGTTGTAGGAGCGGAGATATTGGAAGG
ATTAAAAGGAGCTGCAAGGAGAGGTTTGTTGTGTCTTACTGTATTAAATG
taatacacgtctttttataagaacatgcaaaaattttggaagcttttgga
tgttcttaactttttgagttttaagcctaaaagtgttcttattctcgcca
ttttttgagcatttttgtcctttttcttaagaaattcagtgttttagact
ccgcaaagccttaaaatgttcttaacatattggCCATCGAatctttatgt
tcttatatagtttgttcttatgaaataacGTGTATGCTTTGAGTTTGCAC
AtttttttACTACTATGTGTAATCAtttttttGCGTCTCTAATTTTGAAA
GTTGCTTTTTATCCGCAtacacaacaacaaaaattgtttgagtgcaacga
ctgcctcgttctGAAActattaccaaggtgattaaatctCTTGAGTCCtt
aaaaatgttacttttataaatagagtTAACTTCTTAGAAATCCCTCTTAA
AATCAATTCCTCTTGGAATTAATTATTATAAcaattgtttgaaaacgagg
taaaacgtagctcgtgacgtaatttatgaaaaggtctattgaaataCTAT
AATCATTTCTCTAGGCATCAAAGTCAACATTGTGCAAAACGCGCCAACCA
AACAATTCCCAAACCTGGACACATTTGAATTAGCCAAAGAGGAGAATGTA
GAAGTTCGTTCAATGAAACCAGAAACCTTAGGTGGAGGAGTTCTTCACAC
CAAAGTTTGGGTTGTGGACAAGAGACATATGTATGTTGGAAGTGCAAACT
TTGACTGGCGCTCTCTTACTGAGGTGAATACGATATCTTAGTATCTTGCT
AAcacaacaaaaacttttttccttgGTTCTGGTTAATTTCATGGtgaaaa
gctgaaatttttcaacaagtTGTAGCTTTTCACTCAAAGTTTATCCGAAA
TGTCAGGGTGAATTTATTGTTAATTTCCAAACGGCTGACTACAGGCTAAC
ATGATAAACGACCAATTCAGCCAAATGAGATAATAAGCAAAAAACAACGG
AAAGGACTAATTGTAGTTTGTACAAACTGATATTAGTCCGTAACGATTAT
CGTATTATCCTATAACACACATATTACTATATTACACGGACGATGAACGA
CTCTAGTCTAGATTGACGACATCTCTTTACCGATTCTTCTAGGTCAAAGA
GTTGGGTGCTGCACTTTACAATTGTACATGCGCGGGTGAAGActtgttca
aaatttttgacgtcaacTGGTTACTTGCACAAAAAGACTCACAAATCCCG
TCACCGTGGCCTGAACAGTACCAAACTACTATCAATAAAGGTGGGTGAAT
TtgtatttcaagctaaaaatgggctcttccagaaaatgtccgtacacgGG
GGTGAAGGATATATTGTCACCGGGGTAGcgaatcatcaaaatttgccctg
TCAGGGgaggtaaatttgctctgtccgggggttgTCCGGGGtttcaactg
atgcttgtctagggggtaaaacccgttgtaTCTTCcacccccccatattc
aatttttttctggaaaagcccaatgttaCACTTTATATTGTGCTGTTAAT
GTGAAAAagattgtaaattaaaattgatgagtaagcaaacgatatcactc
ttatttagaaacaaaaacctttaaatttctATAACTGGATTGAAATTGCG
CTCACAGTGATTCTTCAAGTTATAATATATTAATGTCTATGATTTTATTC
TTTATAtatttgtcaactttttttgCTGGTATAAATTTCTATAACTGGAT
TGAAATTGCGCTCCCAGTGATTCTTCAAGTTATAATTATATTAATGTCTA
TGATTTTATTCTTTATATATTTGTCAACTTTTTGCTGGTTCTAATACAAA
AAGGAGTCAAAATTGAGGAATCCCCACTGAGTATTTTATGGTAATATCAT
CGTCTTATAGATCACCCACAAAACATTAAACTGGTGGATGCACCGCCCTT
GGATTACTATTGGTCCACGTCACCGCCCTCGTTTTGTGCGCCTAAACGAA
CGTCTGATATTGACGCCATCATCGACTTGATCTCAAGGGCAGAGAAGTTT
GTTTATATCGCAGTTATGGATTATTATGCAGCTTTTGTTTATCAGAATAA
AAGGTGAGATGTGATGCGAAGACCTTTTTCTCTTTGGTACCCTTAGAGTT
GTTTGTTAAAATGTCTACTCTCGGGTAGGCTGTACGCATCCCTTctgata
tattttgatatagaggatgcgtatcgtgtataaaattcccgtctttgtgt
ttttgatttttagaaacttaatgattagcttgattagtaagttttataCG
AGAGATCTTTTCATTTGATTCGAGCTAAAAATTTGAATGCTTAATACAAT
CATGagcttttcaagaaaattgaatcAAGTTACCcaaaatttggggtaac
tctcggacgggaattttatacacgactTTAAAACTCTCGGATGCTAGTCT
GGATTGAACGAGGAACTGGGAATAACATTGTCTTGgttgaaaaaaagaat
tgatttgttttggatatttgaaaacaattaaTTACGTTAAGTGTgcttat
tttggcaaaaactaattttagcgaattttagtgaaatttgGAAATGGTAA
ACAACATTTTCAACATGGTAAACAATTTAACCCACTTTGACTATCTGGTC
TTGGCGGAAACTTATTCTAGCAAGGCAAAATGTTTCGCTAAAGTCACCAA
AATTATTTCCTTCAATTCCTCCTCCTTCACCTGTTATTGTATTTATTTAG
ATTCTGGCCCACCATAGACGATGCTCTTCGAAGTGCATCTTTCGATCGAG
GAATCGAGGTCCGACTATTGACCAGTAAATGGCCTCACACCAATGCACAG
CAGACAGCTTTCATCAAATCGCTGAACGAATTTGGTAAAATGCCTATGCC
ACACACTAGCGGAAGTATTACTGTGGTAAGTGGTATTCAAATCAAGGACA
AAACTAAGTACATTATGGACAACCAAGGTGTACTTGATTATCCCTAGATT
TTTAAgagtaatgaaaaaaattaactatGGACTATTTAGCTAAACTGGTC
CGCAtttttttGTGACACACTTTAGTCACGTAAACACGAAGCCAAGAGGT
GCCTACTCTGGTACTAAAACTGCAAAGTCCAATGGAAAACGAAAGATACC
ATTGCTTTGCGGTGGATCAAGTAACATCATATAGTACATACTTTAATGGG
AGAATTCTATGTCTTGCTAGTTGTACTCCAGGCTcttattttaatttaat
ttaatttccttTTAGAAACAATTCGAGATGCCACCCAACGAAATTCCATT
TGCACGTGTCAATCACAACAAATACATGGTGACTGATAAAGGAGGCTTCA
TTTCTACTTCCAACTGGTCTGGAGATTACTTCGCGACAACTGCTGGTGTC
AGCCTCATAGTAAATCAAACAGAATCaccacaaaacaaaaaccaGGACCA
GAAAATGCAAGATCAATTAAAAGACCTCTTTATGAGAGATTGGAAATCAC
AATACACGAAGGGCTTATAA Coding sequence (CDS) from alignment at sc0000010_pilon:2588501..2592970+ >XLOC_038621 ID=XLOC_038621|Name=XLOC_038621|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2910bp|location=Sequence derived from alignment at sc0000010_pilon:2588501..2592970+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGTCCTGGATAACGAGGGTGGGGCGCACCACCCTCAAGCTAATGG
CGtcgaaaatttcccacccaTAGAGAAACTGTCTACAAAACGTATGAGAA
GGAAGCAAAGTAAATGGACGTTGATCATcacatttttatcttttattttt
atcattattttaatCACGGTTGCTTATTTGGTTTCCAAAGGATTGTTTGT
GCATGAAGATGCTGAAAAGATGACAGTCCTGGATAACGAGGGTGGGGCGC
ACCACCCTCAAGCTAATGGCGtcgaaaatttcccacccaTAGAGAAACTG
TCTACAAAACGTATGAGAAGGAAGCAAAGTAAATGGACGTTGATCATcac
atttttatcttttatttttatcattattttaatCACGGTTGCTTATTTGG
TTTCCAAAGGATTGTTTGTGCATGAAGATGCTGAAAAGGTACCCATCGTT
AAGAGCTGTCAAGATGACATGACTTGTCGTATAGAAATCGTCGAAACATT
ACCTAAAGTCTTATCCTATCCTTCCGGTTCACCTATGCACGCGAGCACAC
CAGACGTGTGGAAGAAACTAACGAAAGTCGCGCGTGAAAGGATTGATATC
TTATCGTTTTATTGGACGCTGAAAAACTTCACTTACGATGAGGCAGTTGT
AGGAGCGGAGATATTGGAAGGATTAAAAGGAGCTGCAAGGAGAGGTACCC
ATCGTTAAGAGCTGTCAAGATGACATGACTTGTCGTATAGAAATCGTCGA
AACATTACCTAAAGTCTTATCCTATCCTTCCGGTTCACCTATGCACGCGA
GCACACCAGACGTGTGGAAGAAACTAACGAAAGTCGCGCGTGAAAGGATT
GATATCTTATCGTTTTATTGGACGCTGAAAAACTTCACTTACGATGAGGC
AGTTGTAGGAGCGGAGATATTGGAAGGATTAAAAGGAGCTGCAAGGAGAG
GCATCAAAGTCAACATTGTGCAAAACGCGCCAACCAAACAATTCCCAAAC
CTGGACACATTTGAATTAGCCAAAGAGGAGAATGTAGAAGTTCGTTCAAT
GAAACCAGAAACCTTAGGTGGAGGAGTTCTTCACACCAAAGTTTGGGTTG
TGGACAAGAGACATATGTATGTTGGAAGTGCAAACTTTGACTGGCGCTCT
CTTACTGAGGCATCAAAGTCAACATTGTGCAAAACGCGCCAACCAAACAA
TTCCCAAACCTGGACACATTTGAATTAGCCAAAGAGGAGAATGTAGAAGT
TCGTTCAATGAAACCAGAAACCTTAGGTGGAGGAGTTCTTCACACCAAAG
TTTGGGTTGTGGACAAGAGACATATGTATGTTGGAAGTGCAAACTTTGAC
TGGCGCTCTCTTACTGAGGTCAAAGAGTTGGGTGCTGCACTTTACAATTG
TACATGCGCGGGTGAAGActtgttcaaaatttttgacgtcaacTGGTTAC
TTGCACAAAAAGACTCACAAATCCCGTCACCGTGGCCTGAACAGTACCAA
ACTACTATCAATAAAGGTCAAAGAGTTGGGTGCTGCACTTTACAATTGTA
CATGCGCGGGTGAAGActtgttcaaaatttttgacgtcaacTGGTTACTT
GCACAAAAAGACTCACAAATCCCGTCACCGTGGCCTGAACAGTACCAAAC
TACTATCAATAAAGATCACCCACAAAACATTAAACTGGTGGATGCACCGC
CCTTGGATTACTATTGGTCCACGTCACCGCCCTCGTTTTGTGCGCCTAAA
CGAACGTCTGATATTGACGCCATCATCGACTTGATCTCAAGGGCAGAGAA
GTTTGTTTATATCGCAGTTATGGATTATTATGCAGCTTTTGTTTATCAGA
ATAAAAGATCACCCACAAAACATTAAACTGGTGGATGCACCGCCCTTGGA
TTACTATTGGTCCACGTCACCGCCCTCGTTTTGTGCGCCTAAACGAACGT
CTGATATTGACGCCATCATCGACTTGATCTCAAGGGCAGAGAAGTTTGTT
TATATCGCAGTTATGGATTATTATGCAGCTTTTGTTTATCAGAATAAAAG
ATTCTGGCCCACCATAGACGATGCTCTTCGAAGTGCATCTTTCGATCGAG
GAATCGAGGTCCGACTATTGACCAGTAAATGGCCTCACACCAATGCACAG
CAGACAGCTTTCATCAAATCGCTGAACGAATTTGGTAAAATGCCTATGCC
ACACACTAGCGGAAGTATTACTGTGATTCTGGCCCACCATAGACGATGCT
CTTCGAAGTGCATCTTTCGATCGAGGAATCGAGGTCCGACTATTGACCAG
TAAATGGCCTCACACCAATGCACAGCAGACAGCTTTCATCAAATCGCTGA
ACGAATTTGGTAAAATGCCTATGCCACACACTAGCGGAAGTATTACTGTG
AAACAATTCGAGATGCCACCCAACGAAATTCCATTTGCACGTGTCAATCA
CAACAAATACATGGTGACTGATAAAGGAGGCTTCATTTCTACTTCCAACT
GGTCTGGAGATTACTTCGCGACAACTGCTGGTGTCAGCCTCATAGTAAAT
CAAACAGAATCaccacaaaacaaaaaccaGGACCAGAAAATGCAAGATCA
ATTAAAAGACCTCTTTATGAGAGATTGGAAATCACAATACACGAAGGGCT
TATAAAAACAATTCGAGATGCCACCCAACGAAATTCCATTTGCACGTGTC
AATCACAACAAATACATGGTGACTGATAAAGGAGGCTTCATTTCTACTTC
CAACTGGTCTGGAGATTACTTCGCGACAACTGCTGGTGTCAGCCTCATAG
TAAATCAAACAGAATCaccacaaaacaaaaaccaGGACCAGAAAATGCAA
GATCAATTAAAAGACCTCTTTATGAGAGATTGGAAATCACAATACACGAA
GGGCTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:2588501..2592970 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1201-1455:4216 |
| Aaloc | 1027-1200:3702 |
| Aaloc | 835-1023:2863 |
| Aaloc | 685-831:2093 |
| Aaloc | 478-684:1517 |
| Aaloc | 220-474:668 |
| Aaloc | 1-219:1 |
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