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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:491926..495501+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038597 ID=XLOC_038597|Name=XLOC_038597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3576bp|location=Sequence derived from alignment at sc0000135_pilon:491926..495501+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAGGAAAGATTTGGAAATTGTTCGAACGATATCAGCGAAACAAATTG
TGAATGTCCTTGCATACAACCCGTTACTTGTCTCAGTGATCTTCGAATTA
CGTAAGTAAACGAGTGTTCTGGTGATATGCCGGACACAAGCTCTCCCGCG
CAGTTCGAGTGGCGTTACCATCGTAACTGTTTGTCGCGTGCAAAAAACTA
GCAGTATCTGGACAGCGCTGAATGTATTTGAAAAAGGAAGAGTTGCTGCT
TTGTAAAGAATATatgcgtttttttataagaatggtgttttttttccGTT
TCACAattgatattcttaactttttacgaaaaatcatcctgaaatatttt
ttacggTATTCTAACGAAAATCCAACCATAAATTTACCTTGTATTACACG
CCTGAAGCAAAAAATGGCCTTTTTTAAAAGTATTGAGCCTTACTTCGGGA
TATTTGgctatttacagttaaaaagCTCTGAAAATGACGATCATGTTGCC
GAATTACATGATGGTACTCTAAAGGTCCCAAATAgtagggggaggggggg
ggtctgaataaaagggggtccgaaattttttcaaaatcttatgaACGGGG
GAAGTTCGAATAAAAGCGGCTAAAACCAGGCTATTTgctatttagagcaa
ttctTTTTAAGATAATCTAACCATGGAAGACGATAGCCTTTAAACCAAAG
AGCATAAATACGTTATAATATCAGGGGttgtcaaagcaaatttttcagaa
aacgAGCTCAAATGCAACCCTTTGAGTTGCTACCATAGTATCAGagattg
agttttcaaagaatatactGTAATGATtttggcctgtgcttttcacggta
tggagttgcttaaaaaattgtgtattcacattaaatttccttttttaaca
GATCCAATACGCTTGAATGCAATCCAgaagataaaagaaaaacagattTC
TCAGGGATATGGTACACAGGTGATGAAACTCAGTTAGATCTTTGTATGGA
TCCCGAATGCAAAACACGGTAAGTACAAAGTGCATAGTTTTCTCTTTCCT
ACagaaattttcaccaatatcTAATggtgattgaaaaatgaaattctgaA
AGCTGTTAACGTCGGCCATTTTCCGATCACAAGCTATTTTCTATGCCTTT
AGAAGTAATCTTCTGATATTTTAACTGGTTATATGGAGCGGAAAAGGGGG
TAATAGAAAGATAGTGAtagtagcatgaaggtagagcattcaGCCAGGTc
atcccaaaatggtacttgatgcatctctgcttgatgctcatcaactaaag
agacggatcaagggtaagtggaaaaATCCATGGAAAGGAGGGGCGTCCTC
CCATATCTTAGGGTGGACAGCTAGACTGTGGTCGCACATTTACTTAAAAT
ATTGACCATTGATAATGGGGaaaaaaaGAAGTAGCTATTCTAATATTAAC
AAGAAGCCGAagcggcatgaaggcccagctgacgtggcaataaccagATG
TCGTTCGTAtcggagcccccccccccccagcggaccctcaattcacgcaa
tcacgcaatttttttttgaaattcacacATTCATGCAAATTtacctcgag
tttcacgcaataacccgatttttcaggaaGTCGGGAagaatcggggaaac
attgaaaaatcgggaaaactgcacatgatcggtggaaaaaagggaaaatt
cacgtattcacgcacaaaatggCCCAGAAtcacgcattcatgcaatcaaa
aagtgaattttcacgttcacgcaaattttttcaattcaagcattcacgca
ttttttttccaattttcacgcattcacgcaaccgaaaatgcccattcaca
cattcacacaaaccactggggggggggcgtaTCGGGTACCTTAAGAGAAC
CAATATTTGCGGAATCTTATTGTTGCAATTTTAGGGTTTGAAAGAAAACA
TCGAGTCTTAGAATCCTAATTAACATTTTCGGCAGAGATTGAAATAcgga
acattcaaaaatttaaaaaagttcgaaaattggctgaatgaaaaaaaaag
aaaagataccagctgcgctggaaggtcagaaatgataaatgatacgcaat
atatgtatataatagatttactttatgtttttgttactagtataaaagaa
aaaatcggtTTAGATTGATTCACAAACTTCAAATATTAAATGTTGACCGT
CAACGTTCAGAAGTATAGATTTAACGcatagcatcatgaaaaaacattcc
aattcaaatttacacgtgagctgcattttagtattcTTTAATGAGTTTAC
TTgggaaaattctctgtcaggtttgaaaaatccaaccaccgaCCGTTTTT
AGTTCAgagcgataaatccaaaattgaccattttcacgggtagcatcatg
aaaaagattccaaacttattcaaaattacacatgagctgcattttagtat
cctttaataaGTTACAGCATAACTTTACTTGAAGAAATTCTCTgcaaggt
ttgaaaaatccagccaccgaccgtttagagcgatcgatccaaaattgacc
attttcacgggtagcatgatgaaaaactttccaaacttattcaaatttac
acatgaactgcattttagtatcctttaatgacttacaacataagtttacg
tggaaaaattctctgtcaAGCTTGAAATATAAAACTCCAACATCCAAATG
CTCCCTGACCTGACTCCATCTGTCCATCCATCtcgaaaaccttgaaaaat
actttgccataaagagaatgaaatttgactttactGCCAATTCAATCCAA
TATAAGAGTAGGTCAAACATCGTGCGGGTAGGCGaggcaaaaattctaaa
tcggccgctggtttagcctggactactggacttgttaatttattgcgcgc
acaggccccgacaaagccaaaatcttttcggtcagttgctttttaaaggc
ccactGGGCCAAAAAGGattttatttcactaaaatcctttttaatcatat
caaatttttattttttacagttATACTTTGAGCGAATGTAATCGTTTCAA
AGCTGGTTGCAATTGGTGTCATAAATATCCGAACGGAGCGTCTGCGACTG
ACGATAAAAAATATTGTGAATACTCCGACAAACCATGCTTCCCAGATTTA
ATTCCTAAAACAAGCCCTTCACCCCCAAAGAAACCTGGAGATAAAGATGG
ACTTTCCAAAGAAGAACTAGCTGGAATAATAGTTGGCTGTTTGATATTCA
TTTTCATTATCTTGGCAATTGTTTACTTTAAACGGAAGAGCATCAATTGT
GAACCATCAGCAAAATCTGAATCAACAATCGAAACGAATAACAACGCTGT
CAGTAACGCACCAACACTACCTCGACAACAAAAAGCTTTTACCAACTTTG
CTTATGTTGATCAGAATGACCCTGATTCGTTTTCACCGACTGGTGCACCA
AAAACACCGCTCCCACCAGAGGAAGATCCAGTTGCACAAGTTGACGAGGA
CCAATCTAATATTAAAGATGGCAAACTTCCCGATGTTGTTATGAAAAATT
CTAATGACAGTGAATTTGGAGCTTGA Coding sequence (CDS) from alignment at sc0000135_pilon:491926..495501+ >XLOC_038597 ID=XLOC_038597|Name=XLOC_038597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1548bp|location=Sequence derived from alignment at sc0000135_pilon:491926..495501+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAGGAAAGATTTGGAAATTGTTCGAACGATATCAGCGAAACAAATTG
TGAATGTCCTTGCATACAACCCGTTACTTGTCTCAGTGATCTTCGAATTA
CTTTCAGGAAAGATTTGGAAATTGTTCGAACGATATCAGCGAAACAAATT
GTGAATGTCCTTGCATACAACCCGTTACTTGTCTCAGTGATCTTCGAATT
ACATCCAATACGCTTGAATGCAATCCAgaagataaaagaaaaacagattT
CTCAGGGATATGGTACACAGGTGATGAAACTCAGTTAGATCTTTGTATGG
ATCCCGAATGCAAAACACGATCCAATACGCTTGAATGCAATCCAgaagat
aaaagaaaaacagattTCTCAGGGATATGGTACACAGGTGATGAAACTCA
GTTAGATCTTTGTATGGATCCCGAATGCAAAACACGttATACTTTGAGCG
AATGTAATCGTTTCAAAGCTGGTTGCAATTGGTGTCATAAATATCCGAAC
GGAGCGTCTGCGACTGACGATAAAAAATATTGTGAATACTCCGACAAACC
ATGCTTCCCAGATTTAATTCCTAAAACAAGCCCTTCACCCCCAAAGAAAC
CTGGAGATAAAGATGGACTTTCCAAAGAAGAACTAGCTGGAATAATAGTT
GGCTGTTTGATATTCATTTTCATTATCTTGGCAATTGTTTACTTTAAACG
GAAGAGCATCAATTGTGAACCATCAGCAAAATCTGAATCAACAATCGAAA
CGAATAACAACGCTGTCAGTAACGCACCAACACTACCTCGACAACAAAAA
GCTTTTACCAACTTTGCTTATGTTGATCAGAATGACCCTGATTCGTTTTC
ACCGACTGGTGCACCAAAAACACCGCTCCCACCAGAGGAAGATCCAGTTG
CACAAGTTGACGAGGACCAATCTAATATTAAAGATGGCAAACTTCCCGAT
GTTGTTATGAAAAATTCTAATGACAGTGAATTTGGAGCTTGAttATACTT
TGAGCGAATGTAATCGTTTCAAAGCTGGTTGCAATTGGTGTCATAAATAT
CCGAACGGAGCGTCTGCGACTGACGATAAAAAATATTGTGAATACTCCGA
CAAACCATGCTTCCCAGATTTAATTCCTAAAACAAGCCCTTCACCCCCAA
AGAAACCTGGAGATAAAGATGGACTTTCCAAAGAAGAACTAGCTGGAATA
ATAGTTGGCTGTTTGATATTCATTTTCATTATCTTGGCAATTGTTTACTT
TAAACGGAAGAGCATCAATTGTGAACCATCAGCAAAATCTGAATCAACAA
TCGAAACGAATAACAACGCTGTCAGTAACGCACCAACACTACCTCGACAA
CAAAAAGCTTTTACCAACTTTGCTTATGTTGATCAGAATGACCCTGATTC
GTTTTCACCGACTGGTGCACCAAAAACACCGCTCCCACCAGAGGAAGATC
CAGTTGCACAAGTTGACGAGGACCAATCTAATATTAAAGATGGCAAACTT
CCCGATGTTGTTATGAAAAATTCTAATGACAGTGAATTTGGAGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:491926..495501 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 220-774:3022 |
| Aaloc | 103-216:903 |
| Aaloc | 1-99:1 |
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