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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000312_pilon:285003..286956- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038546 ID=XLOC_038546|Name=XLOC_038546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1954bp|location=Sequence derived from alignment at sc0000312_pilon:285003..286956- (Clytia hemisphaerica_ch_hm2_pilon)
AGAATTATTGGTATGTCCTTTTTGGCTGCCATTGGTATTCTGCTGGTCGT
CCTCGGATGTGTTTTAGATGAATTCAAAACAGAAAAAGGGTAAAACATTA
TCAACCTTGAGATCCTTTTTTATTGTTTTTTTTTTTGCTAGAAGCACTTG
TCTTCCTGTCTCAAAGGCATAAATTTAACTTTTTGAAATACATAATTAAT
AGTTCTTTATAGAACTATTTTACTTCTAATTGATTTTAACTTTTAGCAGT
TGCTTCATTTTTCTGTCTTACATTTAGTCCTATAGGTTCATTTTTCAACA
GTTTCTTTATTAACTCTATAAATCCTAAATTTTTTTCAGACCATGGTGGA
TAATGTTTAACTGTAAGATAGCTTTTTTAATTTGAAATTTTATGCTCCAA
GAGTTTCTTCTTAAGAAAATATTGAGAACTGTCCCTGTTAATCCACTTCC
TGAACAAACTTAGAGACAGTTTTTTTAAATGATTTTTACTACTCTATTAA
TAACATAAAATTTGATAGTTTTATGAATAATTGTGTGTTCTCAATCAGAA
AGGGTTCATTATCATAGAAAATAAGTGAAAACGAACCCCTTTATTCAGTC
AAGAAAACATATTTATATTTTCATCTCACTATTCAATTCTTGGCTTGTTT
TAGTATTTTTCTACATACTTGCACCAATCCCTACATTGATTTGCAAAAGA
CTTGGGAATGATTTTTCCTCGTTCAGCGGAACATCAAAGTAAGAAAAAAC
ACTTTGTATATATATCATCACATGATAACGAATGCAATTCGAGAGAAAAA
ATCACGAGTTTCTCTTCTCTTTATGTTTTTCTTTTATTTATAGTTATTAC
ACGGTACCGAGTACAATTATATGGAATATATTTTTTGAGTTCAGATTTTT
CGTCATATTTATTTATGATAATGTTGTTTATCTTCAACATGCAAAAAGAT
GAGTAATCTGATTGACTAAAAATGCGTACATAAATGAAATGCTGTATTTC
ATATTGTACTGTGCAAATGCGAGACCACCTTCAAAAATAGGGGTCATTTT
ATGACTAGAAATGTTTTCTTTTCGCTTACAATACACAACACAACAATTTA
TTTATAATTTTTAGTTTGGTTATTGAAATTGCTTTGTTTTTAACCACCGG
AATCGTCATATCAGCATTTGGTAAGTTTTCGAATCTAACTAATGATGATT
TCTAATACGCAAATTATTTGTATTTTCATAATTGCGTATGCTATAAGTTT
TTTACCAAAATCTTTGTCTCAGAATTCAACAGATCTTCTTGGGAGAAACT
GTCAAAAATTTGATCATTAATTTTATTATTCAAATAATTTTTTTGTTTTT
TCAGGATTACCTGTTGTTTTGGCCAGAGCAAGTGTTGTAAGTTATGATCT
GCAAATATGGTTAATTTTTTTTTCTCTATTTGAAACGATACTGGGTTGTG
GTTCATAGTGTTTTGACCCTTAAAAGTAAGAAGCCGTACACATGAGTTTT
AAGTTTGGAAAATTCCTGACCTTCCTTTTGAATTATCTTAAAAATTACTT
TTGATAATAGATACTTTTAAAGACTATGCAGTTACCTAACTTATAAACTT
TCTAAATGTAGCTCTTTCCCTCCTGCACAAAAACCATTATAACCATATGC
TTTACGACATAACATATTATTTAAAAACGACAAAATCGTTTATTGAAAAA
TGTAGATTTTGCTTTCAGGGGCACTCACATATTAAAGTTTTCCACGCCTT
TTATAGTGTCAACCACCAAGAATTGATGAAATTCTTTGCTTCTTCTATTT
AATCGTTATTTTTTATTAATCCTTTTCTTAAAATACAATTTTGTAGATCA
AATATGGTGCTATGGCTTGTGTAATGATTGGCAATCTGTTCATCTTTGGT
ACAATTCTTTTATTTTTCACAGTGTTTGACCAAGAAGATGATTTTGGATT
TTAA Coding sequence (CDS) from alignment at sc0000312_pilon:285003..286956- >XLOC_038546 ID=XLOC_038546|Name=XLOC_038546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=786bp|location=Sequence derived from alignment at sc0000312_pilon:285003..286956- (Clytia hemisphaerica_ch_hm2_pilon)
AGAATTATTGGTATGTCCTTTTTGGCTGCCATTGGTATTCTGCTGGTCGT
CCTCGGATGTGTTTTAGATGAATTCAAAACAGAAAAAGGAGAATTATTGG
TATGTCCTTTTTGGCTGCCATTGGTATTCTGCTGGTCGTCCTCGGATGTG
TTTTAGATGAATTCAAAACAGAAAAAGGACCATGGTGGATAATGTTTAAC
TACCATGGTGGATAATGTTTAACTTATTTTTCTACATACTTGCACCAATC
CCTACATTGATTTGCAAAAGACTTGGGAATGATTTTTCCTCGTTCAGCGG
AACATCAAATATTTTTCTACATACTTGCACCAATCCCTACATTGATTTGC
AAAAGACTTGGGAATGATTTTTCCTCGTTCAGCGGAACATCAAATTTGGT
TATTGAAATTGCTTTGTTTTTAACCACCGGAATCGTCATATCAGCATTTG
TTTGGTTATTGAAATTGCTTTGTTTTTAACCACCGGAATCGTCATATCAG
CATTTGGATTACCTGTTGTTTTGGCCAGAGCAAGTGTTGATTACCTGTTG
TTTTGGCCAGAGCAAGTGTTATCAAATATGGTGCTATGGCTTGTGTAATG
ATTGGCAATCTGTTCATCTTTGGTACAATTCTTTTATTTTTCACAGTGTT
TGACCAAGAAGATGATTTTGGATTTTAAATCAAATATGGTGCTATGGCTT
GTGTAATGATTGGCAATCTGTTCATCTTTGGTACAATTCTTTTATTTTTC
ACAGTGTTTGACCAAGAAGATGATTTTGGATTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000312_pilon | genome | sc0000312_pilon:285003..286956 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 301-408:109 |
| Aaloc | 271-300:599 |
| Aaloc | 214-267:840 |
| Aaloc | 130-210:1300 |
| Aaloc | 106-126:1615 |
| Aaloc | 16-102:1955 |
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