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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000312_pilon:278929..282573- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038545 ID=XLOC_038545|Name=XLOC_038545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3645bp|location=Sequence derived from alignment at sc0000312_pilon:278929..282573- (Clytia hemisphaerica_ch_hm2_pilon)
CGAAAAATTAGAGAGACGATCAGCAAGACATTTCCAGAGATTCCCAAAGA
AACATTAACATCCTTGATACCAAACAAAGAAGAAATGAGTGTCATGAAGA
TTTTGACGTATAGTGAGCGCAATGTCACTTGTTATTGTCTGAAAAAGAAT
CCTATCTTTTTTGAAGTAGAGGGGTGCATTCTACCGACAGGTTAGTCCCC
TGGTTTGGATTGTGTATTGAAAGGACTTTTTTAACACCTTTAACAGTCTT
TCCTCTGTTTCTTCTTCGTTTTTAGAACAATTTTGTAACAATTTCTTAGA
AATTCCTTAAAAGTGAATAAAATACTTTGAGTTTACACTTAAAGGCACAA
GGCTTACAGTTTTTCAAACGTGTTCCGTAAGTTGATTTTTCTACTTGACA
ATCGAATGTCTTCAGTACCGTGGTGCCCCCCCCCCCAGCGACCGATTTTC
TTTTTTTTTTGGAGGGGGTAGAGGCGCCAAAATAAAAAGGGCGCAAAAAA
CGCCTCTGATTACTAATTTCGGCGCCCGTTTGCTCTTATACACCTTAGAT
AAGGCAGTTTTCGGCCGAAAAGAGAAATATCCCCCAATTTTCGTGCTCGC
ATTGCTCGCGTTATTTCTAAAAAGAGATTTACTTTTCATAGGGCGGGGTT
TTGCCAAAATAAAAAAATTTTCTAAAATTGCCTCCCCAGTTTGTCCGAAC
TTTAGTCGACCCACCACAGTACTGAATGTCTTCATTCTAAAAATTACATT
TAATTATACATTATACAGACCATTGATTTAAAACGCGTTGATGTAAGGAA
GAATTGAGTTAGGAATGTATATGAATGGTCTAAATTTCTAATGGGAAAAA
GAAAAATTTAGCTTATTGCTTTTACAAGTTTCAGTTCACGTGTTTTGGCT
TGCGATCATTTTTACCGAGTTTGTCATAAAAAAAGTTTTCTCTATGTTTT
AGTTTACACTTTATGGCAGCATCCGAACTTAATCTTGTCATTCAGAACAT
TTCCAAATGTACTCAATAATTTACAAGGAGGTGCAGGTAGGTGGATGATA
TATATTTTCAAACACGAATTCTTTAATGCGCCAAAATAAGTAGGTAGAAT
TTAACGGTATTGAAATTAACACGACAAATTATTAAATATCATTTAACGTT
TCTCCTACCATTTGTTCACGCAGCATTTTTAAACAAAAGAAAGAAATTTC
TCCCCCTCTCAAGCCGCGCGAGCGAGCTGAAATTTTGAGAAAGTCTCTTG
TTAATTCTACTTAAAAGACAGGCGCGCCTGAATAGAATAGCTGGGTGTAA
ACTTTTAGCGTGAGTGGTAATTAATGAATTCCGCTTACAATGATTTTCCG
TGGAGGTAATAAAAATATAGATGGAGGTACCACTCCTACTATTCTAGTGT
ATTGTATCGTTGATAGCAAACTGTTGCTTTGTTGCTTTGGGGAAAAGCCA
TTAATTTTGCTTTCGCTCATGGGAATACTTGAGTCGAAGAGAATTTGAAT
AAAACCACGCTACATTTTTAATTTGTTCATTGTGTGATGACAGTTTTGTT
GATAAAAGATAAGAAAACCATGCAAGAATAAGCACAGAACATCGAATTTG
AAATATTCGCTGCTCTCGACAAATTTTGTCAATTTTTACATATTTACTAA
TGCCAATCTTTCAACTATATTCTATCAAAATTTTGAGGCAGCTGCTATTT
TAGATCTAAAGATATTTATAGCAAAGAACCTTCCGCAAACAACAAAGAAT
TCGCAATATTTGAAGAAGTTTACCTCTCGAAAGTTTCCCGATAAAATAAA
AACTTCTTTTAAAACTATAAAGAAATTATTACTCGAAAAAAATTCGCATT
TTACCTAAAAATACGAGGTTTCTTTGGACAGAATAACTTTACTTTAGTTC
TTATAATCTATATCGTGACTGATTTTTGCTATCAAGGTGATCAAAGGAGG
CCGATTTGAAAGAAATTTCTAAAGAGTTTTATGACTTCTACAGAAAAGTT
ATTACTCCATCTAACTTTTATTACCTCTATGGATTTTCTAATATTACTGA
TTTTACTGCTTTTCTTCGCCTTACGGGACTATTTTTCAAGTTAAAATCAC
GGGCTTCTGAAAAATCTACCACTGCAAGTGGTTTTTCTCAGCTAAGGTTG
CACATTTCCAATTCGAAATTTGCTTGCATTGCTTTGACGTTTTTCTCAAA
GAAGGCTAAAACAAAAAGCCGACAAAACGATTCCACGAACACTGATTTGA
GTCTATGGTAGTTAAAAGGATTTTTTGTCCGTCTGAATGAGCCGTCTACC
ATACTAGACTAGTAAACCAGGTAACATTTCTCTTTTTTTTCTCGACAGAT
TTGATGTTTCCTGGTATTATTCCACCTGCAACTGGATTTGGTGATTTCCA
CAAAGATCAAATTGCCGCCGTAACACTGCTTGGGAACGGGTAAATTAAAC
TTGATTCAATTCTTTATTTACTATCTTTGTACCAAAACATTTCTTAGCAG
TTTACAGTAGCTTTATTCAGGAAATGCACCACTGCATCATTTTTGCCTTT
TCATCCTTTTATGTCCCTTATTACTTCTGAAAAGATGGGGAATGCGTGGA
ACTTGCCTTCCCCGCAATGACTGGCTCCCTAGCTTCCTAGCTAAATTCTT
ACTGTCCGTCTATTCAAATAATATTAAAATAGGCTAGAAGAATAGTCAAA
TTTGACCGACATTTTTATTCTTATTCTGTGGATGATTTGCATGTGTTTTT
TTTCGTTTGTTCGGCTTCTCAATATTAGAATCTGCCCAAACTGTTTGACC
TAACTCGGAGGTCCTTTAAATTAACCCGGATGTCCGTTCCATCGTTCTTC
TGTTCGTCCGTCTGTTACCAGCTTTTCTCGGGATTGGCTCATTAGTTCTT
TCTGATTTTTTTGCACAATGATGTAAAGCGACAAAGCTCAAAATGTGATT
TTTAAAGAAATCTTTTTTGGGCAAATTTGGTCCAAAAACCACCCAAAAAT
AGGGTTTTTCGAACAAAATTTGTTACGTAGAATTTCCTGATTTTTTCCAG
AAAGATACATAATAATGTGTGCTAAAAAATGGCCGAAACAACTTTTTCCG
GAAAATTCTTATTCGCCGTAAAAAATTTTACGTGATTTTTTTTATGTCAA
AATCTTGAGCTTCTAAAAAATCTAAAAGTTTTTCTTCGATAAGATTGCAC
ATTTCTAATTCGAAATTGCTTGCGGACAACAGTATTGTTTTTCCTATCAC
CTTTTAACCATTCAGCGAAGAGTGATGTGCTTTTTATTTAATTTTTCCTT
CTCATTATTGTATTTTGCTTCTGTGCTGGACATTATTATCTTTCTTTTCT
GGTTTTATTTTTATGTGACTCTCATCATCAAGTAGGTCCATTTTAGCATG
TGGTTTGTACATATCATAGAAAATCATGTAACAGACTATACAAATCTCCA
TCTCACCTAATTCGAACAAATCCCTCTTAAGATTTCAAGTTAAAGAAACT
CGACTTTGAATTCCATAACTGTCCATCTTTTTTCAGAGCAGCAGTAGCAG
TGGGAATCACAACCTGCAGTAAACGTGATATTGAAACCGGTGGTCCACAA
GGAAAGAAATTGACCATATACCATTGTGTCAAAGATCATCTGTGG Coding sequence (CDS) from alignment at sc0000312_pilon:278929..282573- >XLOC_038545 ID=XLOC_038545|Name=XLOC_038545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=948bp|location=Sequence derived from alignment at sc0000312_pilon:278929..282573- (Clytia hemisphaerica_ch_hm2_pilon)
CGAAAAATTAGAGAGACGATCAGCAAGACATTTCCAGAGATTCCCAAAGA
AACATTAACATCCTTGATACCAAACAAAGAAGAAATGAGTGTCATGAAGA
TTTTGACGTATAGTGAGCGCAATGTCACTTGTTATTGTCTGAAAAAGAAT
CCTATCTTTTTTGAAGTAGAGGGGTGCATTCTACCGACAGCGAAAAATTA
GAGAGACGATCAGCAAGACATTTCCAGAGATTCCCAAAGAAACATTAACA
TCCTTGATACCAAACAAAGAAGAAATGAGTGTCATGAAGATTTTGACGTA
TAGTGAGCGCAATGTCACTTGTTATTGTCTGAAAAAGAATCCTATCTTTT
TTGAAGTAGAGGGGTGCATTCTACCGACAGTTTACACTTTATGGCAGCAT
CCGAACTTAATCTTGTCATTCAGAACATTTCCAAATGTACTCAATAATTT
ACAAGGAGGTGCAGTTTACACTTTATGGCAGCATCCGAACTTAATCTTGT
CATTCAGAACATTTCCAAATGTACTCAATAATTTACAAGGAGGTGCAGAT
TTGATGTTTCCTGGTATTATTCCACCTGCAACTGGATTTGGTGATTTCCA
CAAAGATCAAATTGCCGCCGTAACACTGCTTGGGAACGGATTTGATGTTT
CCTGGTATTATTCCACCTGCAACTGGATTTGGTGATTTCCACAAAGATCA
AATTGCCGCCGTAACACTGCTTGGGAACGGAGCAGCAGTAGCAGTGGGAA
TCACAACCTGCAGTAAACGTGATATTGAAACCGGTGGTCCACAAGGAAAG
AAATTGACCATATACCATTGTGTCAAAGATCATCTGTGGAGCAGCAGTAG
CAGTGGGAATCACAACCTGCAGTAAACGTGATATTGAAACCGGTGGTCCA
CAAGGAAAGAAATTGACCATATACCATTGTGTCAAAGATCATCTGTGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000312_pilon | genome | sc0000312_pilon:278929..282573 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 367-474:109 |
| Aaloc | 277-363:1296 |
| Aaloc | 193-273:2692 |
| Aaloc | 1-189:3646 |
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