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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000029_pilon:197585..199961- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038539 ID=XLOC_038539|Name=XLOC_038539|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2377bp|location=Sequence derived from alignment at sc0000029_pilon:197585..199961- (Clytia hemisphaerica_ch_hm2_pilon)
TCATATAGCCCAAATACAAAAGAAAATTCATTCACAAATAAATCAGACAC
CGCAATGGCAAGTTGGGGGACGAAAACAGACGAAAAATCATCGGAACAAA
AAGTTGGTGCAGTTTACCAGGAAAACATAGCTTTGAGAAAGAAGATTGCT
GGCGAATCAACCGATATCGAGGATGGCTCTGTACACCAGAAGAAATCAAA
ATGGTATACTCAATGCAAATGGCAATGGTTGTTATGGTTACTCACTGTTG
GTACAGCTCTCATTTACATTTTTTATCAAAAGATTCAATACCCATCTTCG
AATGTGTTCTCCTTAAAATCTGATCCACTCACTTTAGGGAAAATTGAAAA
TCGAGAGATCGAGATTTGTAATTCTAACCAGATGAAAAGATCGTTCCCGG
ATTTAGATTATGCTCTTTATGGATACAACATCTTGTTTGGATATCCATTG
GCAATTGGACATGATCCTGGATTGACACATCCTGTTTTCCAGGCTGATTA
CGGTGGCTCAAGGGTGACAGCTGATTGTCGATATCAAGTACCTGAAGGCT
ACGATTTAGTTCCTGATGTTTCTTGTGTTACTTCATTCTCAAGTCAAACC
GTCAAAAATTCTCGACAATTTTCGAAAGAACTCTCTGTTTCAGCTGAAGT
TAGCGGTGGAGGATGGGGAGTCAGCTTCTCAGCTAGCGCCGATTATAAGA
AGAAAGAATCGTCAATGTCAGCCAGTGAATCGGTTTATGTTTTTTCAACC
GCGTCCTGTAATTATTATTTCTCTCTGTTAAACGAGAATAATCCTCCAAA
ATTGACTAAAGACTTTGTAAACCTTGCTAAACAGTTGAAAACTGAAAGCG
ATGTCTTCAAATTTTTCAATTACTACGGAACACATTTTATGACGTATACT
TTATTTGGCGCCCGATTCGTTTACGAGAATAAAATGTCTCAAAAATCGTT
CAAATCAGAAAGCGAAGAAGGCGTCAGTGTATCAGTCAAAGCTAGTTATT
CAGGATTATTCAGTCTTGGTGGTGGTTTTGGTATGAGCAGCTCACAAAGA
CAAGCTGCCGAGGATTTCCAATCTAAAGTCGAAACCAAAACTATCTCGAT
TGGAGCGCCACCACCAGCCGACGGAAACACAATGACCTGGGCGTCCACCG
TCAAAGATACTCCAGTCCCTGTTCGATACAAGCTGGAAAGCATTGAAAAT
CTCTTTTCTTCATTATACATGAGGGGAGAGAATTTTGATTACGATTCGAC
AAAGAAACTGGTCCAATCGAGCAAACTCAAGTATTGTAAAGAGCTGAATG
AAAAAGGTATTATTCAAATACTGAATTATAGATATTAGGGATGGGGGAGC
TCAATTTTAAAACGACTGCGTATGCGCGGTAGACTTCTGTTCATCCACCA
GCGAAAAGGGACTCTTATAAAGGTAGTACATCTATTAGATCAGCCTATAG
GTCTCCCGTTCAGACTATATGCGCGGCTATAATTTAGAAGCACGTGTAGC
GTACCTTGAAAATCGCATGCCGAAATCATATTCCAACCTGTGACTACTAA
TCGCGATTCTATTCAGCGCACCAACGGAGAGAAAAGTAACCACGACGACA
ATTCAAGATCTTGGATTAAGATCAAAGTTGATATTTTTTTTCTCGCAGTC
TTAGAAACACAATGATGCGGAATGAAAAAGTACGTACTTACCAGGGGGTA
TAGCCATTCGCGTACAGGGGGGAGGTACTCGATTTTCGACATTTTAGTGC
GTACGTACTATGTGGACGGCCTCTACTGGTACAAATAGGCTGTTATGAAA
TAGTATTCTTTCTTCAATTTTCATTCCAGGAATTGTGGATAGCTGTAAAA
TGGTAACCAATGTCATTAGTTTAATAGGCCTATCAGTCTGGGGAGGTACA
TTGAATCAACTCAACAGAGATCGATGTGAAGATAAGTGTCTTGAAGATGA
CCGATGTATTGTACTCGAATATCCTGCTGCAAATCAGTGTTGGTTGTTTT
ATCATGATAAACAATCGAATGTTACGCTCTTAGGTAAAGCTTCTATGCCC
GTTCCAAAAGGTGAAGAATATGGTACTTTCATATTTTATGATGCTTTAAA
ACTCCTTGGACATACTTTAAAAATTGAACGAATCGCTATTAAACCAGGTC
AATTAGCTCGAAAAAATATACGTACTAATGAAACAGATTGCTCTATGGAG
TGTCGGCAAGACCAGGCGTGTGCTATGGTGACTTTCAACAGACAAGCACA
ACCAGAAGAAAATAACTGCAAGCTATATAGCGAGGATAAGTTCGAATGTC
CAGATGATATCAAGGAGTGTCATATTATTGCATATGATATTAAATATGCA
AATTACGTAACGATTTTCAATCCCTGA Coding sequence (CDS) from alignment at sc0000029_pilon:197585..199961- >XLOC_038539 ID=XLOC_038539|Name=XLOC_038539|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3708bp|location=Sequence derived from alignment at sc0000029_pilon:197585..199961- (Clytia hemisphaerica_ch_hm2_pilon)
TCATATAGCCCAAATACAAAAGAAAATTCATTCACAAATAAATCAGACAC
CGCAATGGCAAGTTGGGGGACGAAAACAGACGAAAAATCATCGGAACAAA
AAGTTGGTGCAGTTTACCAGGAAAACATAGCTTTGAGAAAGAAGATTGCT
GGCGAATCAACCGATATCGAGGATGGCTCTGTACACCAGAAGAAATCAAA
ATGGTATACTCAATGCAAATGGCAATGGTTGTTATGGTTACTCACTGTTG
GTACAGCTCTCATTTACATTTTTTATCAAAAGATTCAATACCCATCTTCG
AATGTGTTCTCCTTAAAATCTGATCCACTCACTTTAGGGAAAATTGAAAA
TCGAGAGATCGAGATTTGTAATTCTAACCAGATGAAAAGATCGTTCCCGG
ATTTAGATTATGCTCTTTATGGATACAACATCTTGTTTGGATATCCATTG
GCAATTGGACATGATCCTGGATTGACACATCCTGTTTTCCAGGCTGATTA
CGGTGGCTCAAGGGTGACAGCTGATTGTCGATATCAAGTACCTGAAGGCT
ACGATTTAGTTCCTGATGTTTCTTGTGTTACTTCATTCTCAAGTCAAACC
GTCAAAAATTCTCGACAATTTTCGAAAGAACTCTCTGTTTCAGCTGAAGT
TAGCGGTGGAGGATGGGGAGTCAGCTTCTCAGCTAGCGCCGATTATAAGA
AGAAAGAATCGTCAATGTCAGCCAGTGAATCGGTTTATGTTTTTTCAACC
GCGTCCTGTAATTATTATTTCTCTCTGTTAAACGAGAATAATCCTCCAAA
ATTGACTAAAGACTTTGTAAACCTTGCTAAACAGTTGAAAACTGAAAGCG
ATGTCTTCAAATTTTTCAATTACTACGGAACACATTTTATGACGTATACT
TTATTTGGCGCCCGATTCGTTTACGAGAATAAAATGTCTCAAAAATCGTT
CAAATCAGAAAGCGAAGAAGGCGTCAGTGTATCAGTCAAAGCTAGTTATT
CAGGATTATTCAGTCTTGGTGGTGGTTTTGGTATGAGCAGCTCACAAAGA
CAAGCTGCCGAGGATTTCCAATCTAAAGTCGAAACCAAAACTATCTCGAT
TGGAGCGCCACCACCAGCCGACGGAAACACAATGACCTGGGCGTCCACCG
TCAAAGATACTCCAGTCCCTGTTCGATACAAGCTGGAAAGCATTGAAAAT
CTCTTTTCTTCATTATACATGAGGGGAGAGAATTTTGATTACGATTCGAC
AAAGAAACTGGTCCAATCGAGCAAACTCAAGTATTGTAAAGAGCTGAATG
AAAAAGTCATATAGCCCAAATACAAAAGAAAATTCATTCACAAATAAATC
AGACACCGCAATGGCAAGTTGGGGGACGAAAACAGACGAAAAATCATCGG
AACAAAAAGTTGGTGCAGTTTACCAGGAAAACATAGCTTTGAGAAAGAAG
ATTGCTGGCGAATCAACCGATATCGAGGATGGCTCTGTACACCAGAAGAA
ATCAAAATGGTATACTCAATGCAAATGGCAATGGTTGTTATGGTTACTCA
CTGTTGGTACAGCTCTCATTTACATTTTTTATCAAAAGATTCAATACCCA
TCTTCGAATGTGTTCTCCTTAAAATCTGATCCACTCACTTTAGGGAAAAT
TGAAAATCGAGAGATCGAGATTTGTAATTCTAACCAGATGAAAAGATCGT
TCCCGGATTTAGATTATGCTCTTTATGGATACAACATCTTGTTTGGATAT
CCATTGGCAATTGGACATGATCCTGGATTGACACATCCTGTTTTCCAGGC
TGATTACGGTGGCTCAAGGGTGACAGCTGATTGTCGATATCAAGTACCTG
AAGGCTACGATTTAGTTCCTGATGTTTCTTGTGTTACTTCATTCTCAAGT
CAAACCGTCAAAAATTCTCGACAATTTTCGAAAGAACTCTCTGTTTCAGC
TGAAGTTAGCGGTGGAGGATGGGGAGTCAGCTTCTCAGCTAGCGCCGATT
ATAAGAAGAAAGAATCGTCAATGTCAGCCAGTGAATCGGTTTATGTTTTT
TCAACCGCGTCCTGTAATTATTATTTCTCTCTGTTAAACGAGAATAATCC
TCCAAAATTGACTAAAGACTTTGTAAACCTTGCTAAACAGTTGAAAACTG
AAAGCGATGTCTTCAAATTTTTCAATTACTACGGAACACATTTTATGACG
TATACTTTATTTGGCGCCCGATTCGTTTACGAGAATAAAATGTCTCAAAA
ATCGTTCAAATCAGAAAGCGAAGAAGGCGTCAGTGTATCAGTCAAAGCTA
GTTATTCAGGATTATTCAGTCTTGGTGGTGGTTTTGGTATGAGCAGCTCA
CAAAGACAAGCTGCCGAGGATTTCCAATCTAAAGTCGAAACCAAAACTAT
CTCGATTGGAGCGCCACCACCAGCCGACGGAAACACAATGACCTGGGCGT
CCACCGTCAAAGATACTCCAGTCCCTGTTCGATACAAGCTGGAAAGCATT
GAAAATCTCTTTTCTTCATTATACATGAGGGGAGAGAATTTTGATTACGA
TTCGACAAAGAAACTGGTCCAATCGAGCAAACTCAAGTATTGTAAAGAGC
TGAATGAAAAAGGAATTGTGGATAGCTGTAAAATGGTAACCAATGTCATT
AGTTTAATAGGCCTATCAGTCTGGGGAGGTACATTGAATCAACTCAACAG
AGATCGATGTGAAGATAAGTGTCTTGAAGATGACCGATGTATTGTACTCG
AATATCCTGCTGCAAATCAGTGTTGGTTGTTTTATCATGATAAACAATCG
AATGTTACGCTCTTAGGTAAAGCTTCTATGCCCGTTCCAAAAGGTGAAGA
ATATGGTACTTTCATATTTTATGATGCTTTAAAACTCCTTGGACATACTT
TAAAAATTGAACGAATCGCTATTAAACCAGGTCAATTAGCTCGAAAAAAT
ATACGTACTAATGAAACAGATTGCTCTATGGAGTGTCGGCAAGACCAGGC
GTGTGCTATGGTGACTTTCAACAGACAAGCACAACCAGAAGAAAATAACT
GCAAGCTATATAGCGAGGATAAGTTCGAATGTCCAGATGATATCAAGGAG
TGTCATATTATTGCATATGATATTAAATATGCAAATTACGTAACGATTTT
CAATCCCTGAGAATTGTGGATAGCTGTAAAATGGTAACCAATGTCATTAG
TTTAATAGGCCTATCAGTCTGGGGAGGTACATTGAATCAACTCAACAGAG
ATCGATGTGAAGATAAGTGTCTTGAAGATGACCGATGTATTGTACTCGAA
TATCCTGCTGCAAATCAGTGTTGGTTGTTTTATCATGATAAACAATCGAA
TGTTACGCTCTTAGGTAAAGCTTCTATGCCCGTTCCAAAAGGTGAAGAAT
ATGGTACTTTCATATTTTATGATGCTTTAAAACTCCTTGGACATACTTTA
AAAATTGAACGAATCGCTATTAAACCAGGTCAATTAGCTCGAAAAAATAT
ACGTACTAATGAAACAGATTGCTCTATGGAGTGTCGGCAAGACCAGGCGT
GTGCTATGGTGACTTTCAACAGACAAGCACAACCAGAAGAAAATAACTGC
AAGCTATATAGCGAGGATAAGTTCGAATGTCCAGATGATATCAAGGAGTG
TCATATTATTGCATATGATATTAAATATGCAAATTACGTAACGATTTTCA
ATCCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000029_pilon | genome | sc0000029_pilon:197585..199961 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1309-1854:547 |
| Aaloc | 1-1305:2378 |
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