|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000029_pilon:10584..17280+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038514 ID=XLOC_038514|Name=XLOC_038514|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6697bp|location=Sequence derived from alignment at sc0000029_pilon:10584..17280+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTTATTCATCATTCATCGAAAGTATATTAGCACACCCGATGACAGA
GCAAGTTTGTTTTTTCCTTGTTCCTGCAATCTCACCGAAGCTTTCTTTGC
AGACGTTGTCGAAAGTCTTGGTGACAATGGATGAAGAGAAGATTCAAAGT
GTTTGGATGTTATATTCTCTGTTATCCATTATTGAACAGAATCAAGGTAT
GTCCACTAACCTTAAACAGTTGACTCCGGTCAAAGTTTCCAAGCCGccta
agcaaaatctttgatctgatttttttgaaagtggtatccGAACGGTAGTA
ATGATACCATTATTTCAAGGCTAGAGATAAACCTATATTAGGCTACGcta
tatcttccttcgtttctcgtaaaactcctactcttcgggatatgagcact
gctcttgttttgaatattgaatttctccAGATACATCGCATGCACACTGA
GGTTTTGATGAAACAaaagagagtttcgaaacctaagccaatcagctgtg
tttgaaacattcttttattttaaatctctattgataaacttcttttgttt
aaaacttCTGTAGTTATGTTTAATCCTATTAATAGGTGAATTCTCTGTGg
aggtcactagtggccgcccatagcagtgcctatagacaagagtaaggcct
aaaaaaCTGTaactgtctattgtgtagactaaacCTTTAACTATACCTGT
ACTGGCCTGTACTactgtattttttttctatccaaattctattttttctc
tctttacTGTGACAGATAATGCTATGGATTTTGAAACGACACTGAACTGC
ACTAAAGCTCTTCGGATCATGATTGACCAATTAAGACCCAGAAAAGGTAT
TTTCTTAGATTCGCGCACGCATCCTTGTTTACGATGAGTAAAAAAGGCCA
TTCCAAGAAATTGTCAACCATCGATTGAATCGCCTCTATGTGTGCTATCA
AATATTACATGGGTCGCGGTGATCCTAGGTCCTTGCAGGTGGTATGTGGA
TGACACTGTTAAGtgaatttgatgaaaaacgCCATCTTGTCTATTTTCTT
TTGCTTTCGATCATAAAAAATCCACTTTAAGGATGCagatattttttgtc
aaaatagaATAATTATTAAATCTGTGTTTCCATTCTAAatttattattca
aatcttaggtttttgttgttttttaaatgttgatcttttcaagttgtcct
tgtttttCCCCTCAGACAAAGAACGTACCGGACAAGTAGAGACATCGGAC
TCTTCGGACGAAAGTAGCGACGAAGATGAATCTGAACTAATGGAGCTCGG
TGAAACCGAACCTATCGTATGTTTTCGTATAACTTATCGGTATAAAATCA
TCGGAAAAAAGTGACGACATTTTttaccgacgaattttcttcgtcgACAA
TTATTTTTGACCGACAATTTAAATTGGCCGGCAGACCATAATTATTGCAG
TACACGCCTCGACCCGAAGAATATATTTTCAGCATTACATCATCTAATGT
CTaaattgtaaaagttattttcgTTTTGTTTGATGCCTTTCTAAAATCAT
AGCGTTATTCCGGAAAAACGTAAACCACGATTGGAGATTGTACCGACTCT
TTGACTGCTATTAAATGATAGGCGTTATTGATAGTATCCAGTCAAAAATA
TAGCAAATATACCTCGAATAACTGCATATTTATCCTCACAATATTTTGAT
CTTTTAGCCTGAAAGTCATTGTCAAAGATATGTTTCTCACAAATGTGTGG
AGCTGATGAGTGAGAAGTTTTTGATATCACCCTGTCTCACTCTACTGTCA
AAGTAAGTGCAcgtaacattttcaaatttgaattctAGAGGAGGTTCTAG
CTGTAGGTTTCTCGTAAACTACATACAGGGAGATGGAGCCGAACCTTAGT
GCCAGTAGCGTAGATAAGAATGGCGTAAAACTTTATTAGGAGAACAGCtc
tttatgacacagtaattgtgtgccataaaaatctgctctcctacacaaat
ttcgCGCCCTCTTCTCTACACTATTAGTAACCTGAACCTACCCTAAACTT
AATGAACCGGATACTGATATACCTGACCGCGACTCCTAGTGGCAGTTTAG
TTTGTCTCGCCTGCAGTCGGGCAAGGATAATGAGGTTTTTAACCAAATCA
AAGTAAGCCAAAAAGGAATTTATGGAATCAACTCCCAGAAATAAAATACT
CCAAGGCTTTCGAATTAAAGGAGAAATTTacttaaaaaatcttcttttat
cTTCTAGGGGATTGCaaaaaaaCAAGTCACTTCGCTCACAACTACTTATC
GATATATGCCATATCTCTCATCACATGCTATACACACTGAATACGCCAGT
ACAGAAGTCTGAGTTCCTTTACTCGCTGGCTTTCTCTAAATACTTTCTGC
GATTGACGTGGTATGAATTGCTTGCATTGGAAACCTATACGAATACTGGG
TAAGTGAGGTGTATTTTGTAAAGGTCTTATATTGAACAATACTACCTGTC
CCTATCCCACTGTCCCTATCCCACTAAAGCGCTTTTTAGGTTTGTCGGTC
TCTCACGTTTTACCACTGATTTTTATATACCTTGGACAAAGATATTTTCG
CCATCTATGatcgaatttttttataaaagtagTACCCTAATGATAGCACT
ACTCGGTGTGGGTCAATTtataattcaatgaaattgttCGTTTAAAAGTC
TTTTATCCTCACTGAGTAGTGCTACCGTTCGGGCACCAGTTTCAAAAAGT
GGTTCTTTTCTTGGCCGGAATCGGGAAACTGTGTCCATCGAGTCCAAACT
TttagtaaattttttatttttttattttacgacAACAGGAAAACGGTCCA
ACTCTTGCACCAATTAGCTCACGGGAATGCGATGACGTCACAAGATGAGC
AACGCGTCATACCGATGTTGAGTGTCTACACAACGCTCCTTCGTTACGCA
ATGTTTTCCATCTATGATACCGATTTCTACAGTGGTAGGATAATTGTGTT
TACgctttctttattaaaagattATCTTTAAAATCGAATTAATGATCTTC
AGCGGTATTATTTTACTTTGAGTTATTTCCTTGTCTGTCACTCTCCAAAT
TTTGGACTGACTTTCGAGCTGATTGTTGTTTTTACCTGGATTGACATCTT
CTTACCACCAAACACAAAATACTAGTTCAATCTTCATAAAAGTTTCTTTA
TCGATTGTAATTTTATTGACAGCTTATTTAAAAATGACTCTTTACCgcat
tttaattcaaaattgaaatatatttatCCATTTTTCCAATTTAATTGTTA
GACAATACGAAATCAACACTGATGCCGTTCCGCATTACGGAAGTCATTGA
AATGTCCCGTATCTTACGTGACGTGGTGCTAGGCTTGATTGTCTTCATGT
ATCCGGACATCAAAATGATCACCACATCGGCTCAACAAAAACAATGGCAT
ACGCTGTGCAGGGTAAGAAATTAATACTTGTTTTTTCCTAATTATTCATC
GCAGTTGGCACTCTCTAATTCGCCGTTCTAAAtcctatttcaaattagct
ggcagtgtttttttcgaacctcaataacttttgatagaatttgaattaag
tagcggtttgtgcttgttgaaaagataatctggagtggaatattatcaaa
aaagaaaaaaattcaaaaaatggaaaaacgaagatgaaaaatgaaaaaga
agaaaatcaacttcttgtagaataatgctacgatctttatttttgtatca
gaaattcttcaatcttagaacatcatgaatgcgaaaaaatattgaaaaaa
tattcattcaatcaaaaaatacatCCTCAAACGTTGCCCTGGTTGACTTA
AAAAGgactcttttttgttgttttttgatgatttttgatatcaatcattg
ataaactttggactatatctttcgatggaataaatttttttgagaatttt
tttcacattaatgatgttctaagatcaaagaatcactcgtgtgaaaataa
taattatagcacaattattaaagaagttgatttttttcttcttcattttc
aatcttcatatcattttccaatttttttgagtttattctttATGGCAATA
tcccactcctgtttgtctttttaatagactttaatattcgataagctcca
ttattcgataatattgaaagtcgccgtcaacaagaaactctctcAAGCGA
CGCGCTCTTCCATTCGActcatttttgataaaaatccaaTGCCCGCTGAA
AACCGAATTTGAGAGCGTATTTTCGTGAATAAGCGCTCTTTGAACTTTCA
AGGCTGCGAAGAACGAGAACGAAGTCtcttttggtttattttttttacga
GAAAAGCCAGACAAGATGGCTAAGTTTTCTCCTTTaatgtatttcaaatt
tttgagtaAGCATATTTTATCGTGTTATTTTCGCGGTCCTTGTTACGGGA
CAAGCCAATCTGGACCGATACAATACTTGAGTTACGGCCAATCCATGACT
GTCAAtctcgaaaaaaatttattaactCTCTTTTTTAGAGTGTTACTTTA
CTCGTGAAACAACTGTACGCGCGTGATTCTCGGCGTCGCTTTTGTCCCGA
ACACCATTGGCTATCTAACCGAGCGGCAATTAGTCacgaaacaatgaaaa
tcaatttctttgtGGACAATGATGACGATGAAATGGATGTTGAAAGTGAT
TTCTCGAAAGACCATCTTTTCAAACCTGGCCTTTCAACGTTAAATGCACG
TAACGTCGCTATTTTGGAATACGTCCCATTTGCAGTACCGTTTCTACAAC
GCGTTCTTGTAAGTAGTGTTATTATTTTAATTCGCTCCCCCCTTCTTCTC
TTATTCGATATTCTAGTGATTAAGAAATTTTCTTCGAGTGTTACACGAAG
TAGGCTGAAAATAAAGTTCAAATTACTAAAGATTTGAGTTGTAGATGTTC
AGAGAGAGTTGGTTGTTTGCTCTACAACGGCTCCACAATTGTCTTGAGAA
ATTTCTATACGCCTTTCAACCTTTAACGGCGTGATCAGCTTTTGAGGGGA
CTGGTAAtaaatttacaaagaaaatattttctcagAAATCTCTTAAAACC
TGTATTTCTataattgggctattccaaaaatagtctgtaccccctatatt
gaggaggtgtgacgtccagtgtggatttgaaaataaaaaatccagggcgA
TCTGGTTTctcgagtgtaaaaatccaggttgTATAGTTAAAATGAAGTGG
AAACGGGTCAGTAAAACGGGGTCAAAATCCAGGTTGGTccaaaaaatacg
aaaaaaatactagggaaggaggtcttgaaaaattgataaaaaaacccagg
ggtcacctttcccaaaaaagacctcctcaacataagggtaaaatcatttt
ctggaatagcccatttgaACTGATTCTCGGTTCTCTTCAAGAGAAAACCG
TTGAAGAATTTTATATTATCGTCTTAAAGTATATCTATTCATGAGTCTGT
TTACTTATTCTGCAAAAACATTCCACAACTCCATTAAAAACGACAACTCA
TTTCAATTCTTATTCGACACTGTCCAGTCAAAACATTGTAAACtctctgg
tcattaaaatgttatattaaagTGAAGAAACTACTGAGGTTAAGGAttcc
aggataatcacgacgacggacgaaaaaggtaataggctagtgaaaatacg
aaatttgattggttgaaactcactagcctgttaaattttcgttcgccGTC
GTGcgctatcttttgttttgatgattggttgaataaCTGCAATCTTTATG
CAAGCTCCGCGTTTTTGaagcagcgattcagacctcGGAAAACATAATGT
CTCTAATGTTTTCCTGTTTTAACAACAGATATTCCAACGTATCATACAAG
AGGATAAGAAAAACAACCAAACACCTGAACAAGCATTTATTTCGGGTGGT
GGAGTCGAAAGTCTTACAATTAACCGAAAATACCTGTACCAAGACGCTTT
TGATCAATTATCAAAGGAACGCCGTGCGGACATCAAGCAAGTAGTTCGCG
TGCAAATGATCAACGCGCAAGGCTTAGATGAAGCTGGGATAGATGGAGGT
GGTGTATTCAGGTTAGTTGCTTTCATTTCATCATcgatttacaaaaataa
ttaaattctATGCTTGGTTCCAATCCGAAATAGCATTTTGTTCTTTATTG
TTCTTTATTGCTATGACTCATCAATAAAGCATATCCCTTAGAACCATTCC
CCTTTTAAAGATTACCTTAaaatggaacaaatttttgcccgaaaagaaaa
cttgaaaaagtAGGAATAAggattttttcatgatttttgtggGCGAAATT
GAGCGGAGAGTTGATTTTGGCGAGAATTGATTAAAATGGTCTCTTATCCC
TTTCCCTCTTTTACCTAGGTGCAGCTAATTATTGAGTTGACGCAAGAACT
AAGACTTTTTTCTAATAATCTTGTCCtaaccccggctcgaaccaccaaag
tAGTCTTATCAGTGATTCGAAACCCGACTTGCAAACCACTAGGCTACCGA
GCTGCTGAAAATAACGGTGCGCCACCCGTGCGTGCCCGCTCGCTCTATAT
GAGCGCTGCACGCAATACTTGCGTTAACTCAGAATTTGGGGTTCTCTTTT
ACCTCAACAGGGAGTTTATGTCGCAATTCATCAAAGAAGCTTACGAT Coding sequence (CDS) from alignment at sc0000029_pilon:10584..17280+ >XLOC_038514 ID=XLOC_038514|Name=XLOC_038514|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3024bp|location=Sequence derived from alignment at sc0000029_pilon:10584..17280+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTTATTCATCATTCATCGAAAGTATATTAGCACACCCGATGACAGA
GCAAGTTTGTTTTTTCCTTGTTCCTGCAATCTCACCGAAGCTTTCTTTGC
AGACGTTGTCGAAAGTCTTGGTGACAATGGATGAAGAGAAGATTCAAAGT
GTTTGGATGTTATATTCTCTGTTATCCATTATTGAACAGAATCAAGATGA
TTTATTCATCATTCATCGAAAGTATATTAGCACACCCGATGACAGAGCAA
GTTTGTTTTTTCCTTGTTCCTGCAATCTCACCGAAGCTTTCTTTGCAGAC
GTTGTCGAAAGTCTTGGTGACAATGGATGAAGAGAAGATTCAAAGTGTTT
GGATGTTATATTCTCTGTTATCCATTATTGAACAGAATCAAGATAATGCT
ATGGATTTTGAAACGACACTGAACTGCACTAAAGCTCTTCGGATCATGAT
TGACCAATTAAGACCCAGAAAAGATAATGCTATGGATTTTGAAACGACAC
TGAACTGCACTAAAGCTCTTCGGATCATGATTGACCAATTAAGACCCAGA
AAAGACAAAGAACGTACCGGACAAGTAGAGACATCGGACTCTTCGGACGA
AAGTAGCGACGAAGATGAATCTGAACTAATGGAGCTCGGTGAAACCGAAC
CTATCACAAAGAACGTACCGGACAAGTAGAGACATCGGACTCTTCGGACG
AAAGTAGCGACGAAGATGAATCTGAACTAATGGAGCTCGGTGAAACCGAA
CCTATCCCTGAAAGTCATTGTCAAAGATATGTTTCTCACAAATGTGTGGA
GCTGATGAGTGAGAAGTTTTTGATATCACCCTGTCTCACTCTACTGTCAA
ACCTGAAAGTCATTGTCAAAGATATGTTTCTCACAAATGTGTGGAGCTGA
TGAGTGAGAAGTTTTTGATATCACCCTGTCTCACTCTACTGTCAAAGGGA
TTGCaaaaaaaCAAGTCACTTCGCTCACAACTACTTATCGATATATGCCA
TATCTCTCATCACATGCTATACACACTGAATACGCCAGTACAGAAGTCTG
AGTTCCTTTACTCGCTGGCTTTCTCTAAATACTTTCTGCGATTGACGTGG
TATGAATTGCTTGCATTGGAAACCTATACGAATACTGGGGGATTGCaaaa
aaaCAAGTCACTTCGCTCACAACTACTTATCGATATATGCCATATCTCTC
ATCACATGCTATACACACTGAATACGCCAGTACAGAAGTCTGAGTTCCTT
TACTCGCTGGCTTTCTCTAAATACTTTCTGCGATTGACGTGGTATGAATT
GCTTGCATTGGAAACCTATACGAATACTGGGAAAACGGTCCAACTCTTGC
ACCAATTAGCTCACGGGAATGCGATGACGTCACAAGATGAGCAACGCGTC
ATACCGATGTTGAGTGTCTACACAACGCTCCTTCGTTACGCAATGTTTTC
CATCTATGATACCGATTTCTACAGTGGAAAACGGTCCAACTCTTGCACCA
ATTAGCTCACGGGAATGCGATGACGTCACAAGATGAGCAACGCGTCATAC
CGATGTTGAGTGTCTACACAACGCTCCTTCGTTACGCAATGTTTTCCATC
TATGATACCGATTTCTACAGTGACAATACGAAATCAACACTGATGCCGTT
CCGCATTACGGAAGTCATTGAAATGTCCCGTATCTTACGTGACGTGGTGC
TAGGCTTGATTGTCTTCATGTATCCGGACATCAAAATGATCACCACATCG
GCTCAACAAAAACAATGGCATACGCTGTGCAGGACAATACGAAATCAACA
CTGATGCCGTTCCGCATTACGGAAGTCATTGAAATGTCCCGTATCTTACG
TGACGTGGTGCTAGGCTTGATTGTCTTCATGTATCCGGACATCAAAATGA
TCACCACATCGGCTCAACAAAAACAATGGCATACGCTGTGCAGGAGTGTT
ACTTTACTCGTGAAACAACTGTACGCGCGTGATTCTCGGCGTCGCTTTTG
TCCCGAACACCATTGGCTATCTAACCGAGCGGCAATTAGTCacgaaacaa
tgaaaatcaatttctttgtGGACAATGATGACGATGAAATGGATGTTGAA
AGTGATTTCTCGAAAGACCATCTTTTCAAACCTGGCCTTTCAACGTTAAA
TGCACGTAACGTCGCTATTTTGGAATACGTCCCATTTGCAGTACCGTTTC
TACAACGCGTTCTTAGTGTTACTTTACTCGTGAAACAACTGTACGCGCGT
GATTCTCGGCGTCGCTTTTGTCCCGAACACCATTGGCTATCTAACCGAGC
GGCAATTAGTCacgaaacaatgaaaatcaatttctttgtGGACAATGATG
ACGATGAAATGGATGTTGAAAGTGATTTCTCGAAAGACCATCTTTTCAAA
CCTGGCCTTTCAACGTTAAATGCACGTAACGTCGCTATTTTGGAATACGT
CCCATTTGCAGTACCGTTTCTACAACGCGTTCTTATATTCCAACGTATCA
TACAAGAGGATAAGAAAAACAACCAAACACCTGAACAAGCATTTATTTCG
GGTGGTGGAGTCGAAAGTCTTACAATTAACCGAAAATACCTGTACCAAGA
CGCTTTTGATCAATTATCAAAGGAACGCCGTGCGGACATCAAGCAAGTAG
TTCGCGTGCAAATGATCAACGCGCAAGGCTTAGATGAAGCTGGGATAGAT
GGAGGTGGTGTATTCAGATATTCCAACGTATCATACAAGAGGATAAGAAA
AACAACCAAACACCTGAACAAGCATTTATTTCGGGTGGTGGAGTCGAAAG
TCTTACAATTAACCGAAAATACCTGTACCAAGACGCTTTTGATCAATTAT
CAAAGGAACGCCGTGCGGACATCAAGCAAGTAGTTCGCGTGCAAATGATC
AACGCGCAAGGCTTAGATGAAGCTGGGATAGATGGAGGTGGTGTATTCAG
GGAGTTTATGTCGCAATTCATCAAAGAAGCTTACGATGGAGTTTATGTCG
CAATTCATCAAAGAAGCTTACGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000029_pilon | genome | sc0000029_pilon:10584..17280 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1477-1512:6662 |
| Aaloc | 1243-1473:5879 |
| Aaloc | 973-1242:4539 |
| Aaloc | 814-972:3304 |
| Aaloc | 667-810:2840 |
| Aaloc | 475-663:2259 |
| Aaloc | 379-471:1708 |
| Aaloc | 280-378:1218 |
| Aaloc | 199-276:768 |
| Aaloc | 1-195:1 |
|
