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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000029_pilon:4335..8553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038513 ID=XLOC_038513|Name=XLOC_038513|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4219bp|location=Sequence derived from alignment at sc0000029_pilon:4335..8553+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAATTGAAATTAAACAAATACAAAGtagtgaaaataaaagtataAACAA
TATGTATAGTTTTGATGGCAAACATAAATCAAGAACAAAAGTCTCTCTTG
GTGGCGCATCTAAACAGGTATAAGGGTTTTGCTTCATTCTATTTAATTTC
GAATCAAAATGAATGAAACAACATagtgatttgaaaaaatatcagaatat
tttctttgaaataccAGATACCCAATAATTTTACCATCATATCAGAAGCC
TCCTCAAACGCTTAGTCTGGTGgtaaaaatgaactttttttgCAATAACC
TTTAACATCTTATCAATAAGGGAAATTGGAAATTTCCCCAGCTGTCTCGC
AGTAAGAAAAAGTCAATCAAGATTAGAAACTTAAtcgtcttttttctttt
ttctatgtTATTTTTAGGTTGGaaaaaaaGCTCTTATCGAATCTGCAAGA
GAAGAAAGATTGAAAAGAGAGGTATGAGAGACAccactttatattttttt
ggaaagtatACATTTTATAATTTTGGACTGTTTTTGATACAACCACATGA
CTTTGTATTTACTCTATATCTATAATATCTAATCTATCCTTGCAATGTCA
TCAGTAACATGAGTACACAGGGGTACACACTTTTGTTTAAATTGTTCGCT
GGGTCACATTGTTCAAGACCCTTCAACTCTCATTCCCATCCTATTCCTCC
TAAGCTTGCTCATGTCACCCAAAACTCCTTAAAGTATTTGAGGCATTAAA
AGGTTTGATAATTATTGTATGTTAAAATTTACGATTCCACCAAGTTTGTC
AATTAGGGATTTCTTGAAGCCTTATTTTAAAAATGTGCCTCTGTTTATCC
CCCTAAAGCTATCCAGGAAGCAAAATGAAGCAGCGATCAAGATTCAAGGG
TGGACTAGAAGCTGTTTCGTTCAAAAGAGTTTGGTATGTGGAATATTTTT
CttctcttataaataaatattatatcataagtttattttatattgtaTTT
TGTCAATATCTCTTGTCAATAGCACTCTTTAAGTTCGTATTAGATGTTTA
GGCTATTTTATAGGGAATGaaaaaaaTGGCAGTGAATTAGGATgttggag
caagattttttgatttctaaGAGTGACAAGTTATGTTAAAACCTTTTTGT
CCTCAACTTTAAAATTTCTATGGATTATTTAGATGGTATTTGAATTGATT
ATTTagaattgtttaaaatttttgtttacttcagagTAACAATTTTCGTG
ACAGTTTCGATAAAGCGTTAGAAAATAATGCTGATCTCACTGGTATCACC
ATTGCATCAAAGCTGATTTATTTCTTCTATAACACTGAATTGGATTATCA
AAGACTGGTATAATGACTTTAATTattgttttcactttcatttttttctc
cagttgTGGACCTTATcattaagctctagtttagacggctgaCTTTCTGc
actgcctattctaattgttagagtaggcaaaaagAGGGAACAAAGTtggt
ttttaaaatctttgcttggaaaggtttgaaagaagacattgcattgacgt
caaacaAGGGCTATGCATCGACTTTAGACAGCGAACTAACTGccctcttt
aattcacaattagaataggcagggcaaaaagtgggccgtctaaactagag
ctaaggcATCCAACATTCAGGAATGACATTTTGATGGAATCGTTCTCAAG
TGTCGTTTGTCAGCTGTatgcactgacctttatataccctggacacaGTT
TCTTGATCCCGGTCAAGCAAAATTCtttgattgcaattttttttagaCCT
AAGTAGTATCATAATTAGTACcttaatggtagcactactaaGTGTCCAAA
CTCAATGAAATGCAAATTAACCTACTTTGAGTACCACTACAACTTTATAA
AAACTCTGATAGCCGATATAGCTTGGGCCAGGGTATATGAAAGTCAGTGG
CTGTATGTTTTGCTGCACGACCAAGGTCTTTTTTGAAGGCTTCTCCAAGG
TGTTCTTTTACGTTTGCCTTTACTACCTTTGTAGATGCCAAAAAAGCTTT
ATTCTGGTATGAAGCAGTCCTTTCTTAACTCATAAAGTGTGGTCTGTTTG
TATTCTCAACGCTCTCCTTTGTTTATTTAGTGTGGTTATGCAAGGGGAAA
TCCCCTGAAATCCTCTCTAGATCTTGAACAGACCCGTATTTGCTTGTTAT
AATCAAAGGCAACTGTTATCCATCGTTGTTTTAGTGactcatttttttct
ctttcaggtACTTTTATCACAAAAGCTGTTGAAATTGGCTTCAAGTAAAC
AGATTCAAACGTTGTTATCAAGCAATTCTGACGAATGGTTTCACCGTTTG
AAACGTGTTCTAGTTGTCTGCTCAAGGTAGATATGGTTGTCATCACCAGT
GATCTTTCTTATAGTGTACTATGCTTTTATATATCTTGGACCAAGCTTTA
TGCATCATCTCAtgctaatggtagcactactcgatATGGGTCAACTTATA
attccatgaaattttctgtttgatttttttttcatccattGATGAGTAGT
GCTTCCATTAGGGTACAACTTTCAAAAGATTCTGATCAAAGACTTTAATT
TGGTAGGATCGAGAAACCTTGTCCAATGTATAAAAAGATCAGTGGTTATC
CTCCAAGCAACTGaagctgggtgtccactgaAAAATAATAAGTTCGTCGC
AAATACCTGTTgataaaaaggtttttaattCGACGAACAAATTCGCGACG
AACTTATTTTTTCCCAGTGGACACCCAtctttataattttaaaaacaaat
gataaaaacTCTGGTAGCCAAATTCTGTGTCAAAAAGGTgtgcagtgttt
ttatttttggccgaaactttcaaacatttttcaagttataaaaaagttgg
tatcgttggaaagatattttttttttaaaattcgttcaagaaagtgaaga
aaatgaagaagacaaaaatgaacttcttgtagaaaagcgctgtatttact
atttttacaagaatgaaacttcaatcttagatcagcAATagtgtgaaaaa
tattttcaaaaatttcaatccaATCAAATGATATAAAAGAAAGTTTGTCT
CTGCTCGACcacaaaaaacagcaaaaaacactTATTTTAGGGGTCAATCA
GTTGAACACTTTGTTTAATATATTTTGAGggaattaatatttttttaaag
atcttttcatcgttatttcctaaaatcaatttcttcGCCTTGCGACACCA
TATCTTTAATCATTTATGTTTATCTGTTTAGGACTTTATCATCATCAGGT
GATAGGAACGTCTCCATACCTTTGAGAATGTTGGAAGTGTTCACCAGCTT
AAAAACATATGAATGGCTACCTTCAGAAGAAAACCAAATGAAAACTGTCT
TCTCCATCACATCTCATCTTACAACCAAAGGTATAAACCAGCATAACCTG
TCAACCCGGTCAATTTTTTGGGGAactggtaatgaatttataAGGAACAT
TTGTTCCTGGCGAACAGTATTTTTAGGCTGCCTTTTAAACAAACCAAACT
AATTCACGTCAAAACTTTGAAGACACTTTCCCATGCCTCTGTGGTGGAGT
GCAAACCTTTTTAGCTTTTAtagtagttttttttttgtattcgaatattt
ctactCAATAGTGTTACTTTATCACTTCAATTCATAAAggtatcttacat
ttttcacaagagcGATTGTATACTTGTGTTTTCAATACCGTCTTCGAATG
AAATTTTCCATGTAACTTCATTACCAGTCTCCTCAAAAGCTGACCGGGTC
GCTAAGGGTTAAATAGTTGTATTCAACCCAATACACCCagttttgagaac
attttaaatttgtcgttgttgaaaaattacaaaaagttctgaaaagtatt
caaaaaatgatgaaaatcactgattttacTACCATAATATTCCaaaaact
ttctcaaattttcaagttgtactaaaaggattttaaatattttgggtATG
CCACCACCTCACTAAACAATTGATGCAATTGATTATGCAATTAAACAAGa
tgcaatttttactttttcaggtTATTTCAGTCAAATGAGGCAACTTTTGA
TCACACGAGTACCAGATAGCCTGGAGCCGTCATCTCATCCACCAACACCA
CTAGCCGGTGCTATCAAAGACCTCATTATGAAACCATTGGAATTAGTAAT
GGGAGACAGCCCATTATCG Coding sequence (CDS) from alignment at sc0000029_pilon:4335..8553+ >XLOC_038513 ID=XLOC_038513|Name=XLOC_038513|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1572bp|location=Sequence derived from alignment at sc0000029_pilon:4335..8553+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAATTGAAATTAAACAAATACAAAGtagtgaaaataaaagtataAACAA
TATGTATAGTTTTGATGGCAAACATAAATCAAGAACAAAAGTCTCTCTTG
GTGGCGCATCTAAACAGAGAATTGAAATTAAACAAATACAAAGtagtgaa
aataaaagtataAACAATATGTATAGTTTTGATGGCAAACATAAATCAAG
AACAAAAGTCTCTCTTGGTGGCGCATCTAAACAGGTTGGaaaaaaaGCTC
TTATCGAATCTGCAAGAGAAGAAAGATTGAAAAGAGAGGTTGGaaaaaaa
GCTCTTATCGAATCTGCAAGAGAAGAAAGATTGAAAAGAGAGCTATCCAG
GAAGCAAAATGAAGCAGCGATCAAGATTCAAGGGTGGACTAGAAGCTGTT
TCGTTCAAAAGAGTTTGCTATCCAGGAAGCAAAATGAAGCAGCGATCAAG
ATTCAAGGGTGGACTAGAAGCTGTTTCGTTCAAAAGAGTTTGagTAACAA
TTTTCGTGACAGTTTCGATAAAGCGTTAGAAAATAATGCTGATCTCACTG
GTATCACCATTGCATCAAAGCTGATTTATTTCTTCTATAACACTGAATTG
GATTATCAAAGACTGagTAACAATTTTCGTGACAGTTTCGATAAAGCGTT
AGAAAATAATGCTGATCTCACTGGTATCACCATTGCATCAAAGCTGATTT
ATTTCTTCTATAACACTGAATTGGATTATCAAAGACTGgtACTTTTATCA
CAAAAGCTGTTGAAATTGGCTTCAAGTAAACAGATTCAAACGTTGTTATC
AAGCAATTCTGACGAATGGTTTCACCGTTTGAAACGTGTTCTAGTTGTCT
GCTCAAGgtACTTTTATCACAAAAGCTGTTGAAATTGGCTTCAAGTAAAC
AGATTCAAACGTTGTTATCAAGCAATTCTGACGAATGGTTTCACCGTTTG
AAACGTGTTCTAGTTGTCTGCTCAAGGACTTTATCATCATCAGGTGATAG
GAACGTCTCCATACCTTTGAGAATGTTGGAAGTGTTCACCAGCTTAAAAA
CATATGAATGGCTACCTTCAGAAGAAAACCAAATGAAAACTGTCTTCTCC
ATCACATCTCATCTTACAACCAAAGGACTTTATCATCATCAGGTGATAGG
AACGTCTCCATACCTTTGAGAATGTTGGAAGTGTTCACCAGCTTAAAAAC
ATATGAATGGCTACCTTCAGAAGAAAACCAAATGAAAACTGTCTTCTCCA
TCACATCTCATCTTACAACCAAAGgtTATTTCAGTCAAATGAGGCAACTT
TTGATCACACGAGTACCAGATAGCCTGGAGCCGTCATCTCATCCACCAAC
ACCACTAGCCGGTGCTATCAAAGACCTCATTATGAAACCATTGGAATTAG
TAATGGGAGACAGCCCATTATCGgtTATTTCAGTCAAATGAGGCAACTTT
TGATCACACGAGTACCAGATAGCCTGGAGCCGTCATCTCATCCACCAACA
CCACTAGCCGGTGCTATCAAAGACCTCATTATGAAACCATTGGAATTAGT
AATGGGAGACAGCCCATTATCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000029_pilon | genome | sc0000029_pilon:4335..8553 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-786:4073 |
| Aaloc | 490-636:3283 |
| Aaloc | 370-486:2258 |
| Aaloc | 247-369:1235 |
| Aaloc | 172-246:859 |
| Aaloc | 118-171:418 |
| Aaloc | 1-117:1 |
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