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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:1522218..1527522- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038461 ID=XLOC_038461|Name=XLOC_038461|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5305bp|location=Sequence derived from alignment at sc0000066_pilon:1522218..1527522- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCGGATTAAAAAGAGGAAACAATATTTCATCATCTGATTACGTGAA
ATTACGTAGAATAAGCGATACCAATGACATCCTATTGAGCAATTCAGACG
CCACTATATCTATGGATACAGGTATTGATCTGCTTTAGGGGGCCATTTAA
AAATTACTACCCTGTTGGAACTAGTTGTCGCGGGAACTAATTTTCGCGGT
CGAAAAAAAAATCTTAAAATTAATTTTCCTAGGTATTTTTCAAACTTTTG
GATATAAAATTGGAAAAAATTGTATTTTGCAGGTTCAAATTTCTGCAGTT
TTGCCAAAAAAATGCAAAAAACGCTGAAATTAATTCCCGTGAAAATTAGT
TCTAATAAGGCACTCTCCAAGTCAACAAATTTCCTCCTTCTTTACACTCT
TTGATATGATTTAGTTGTTAATGATGCTACTTTGTGTAAATTCATTCCTA
AATGGTAAATGTCCCCTTTTCTTGGGTTTTATTTAAGAAAGTTTTGAGAA
AGGTTATTTTAAAGTATTTCATCAGTTCGGAAACATCATTAAGTTAAATT
CCCTTTTTTCTCTGAACAGCAGCCTTTGGCAGCAGTAGTTTATATCCAAC
TGGTGGTAACTGTCAGATCTGTGAGGACAAAGCTACAGGAAAACACTATG
GTGCAATAAGCTGTGATGGGTGTAAAGGATTCTTTCGTAGAAGCATCCGA
AAGAATCAGAACTATAGCTGCAGGTTCAGTAAAGATTGTAAGATCAGCAA
AGACAATCGAAATCAATGTCGTTATTGTCGATTGAGGAAATGCATCCGTG
TGGGAATGAAGAAAGAAGGTAAGAGATTGTGATTGCAGTTCTTTTGGTGT
TTTCCAACCTTGTCCCAGTGTATCCTAGGCTTTATTTTGTTTTCGATGGA
CGCCAGAGAATACCCTGATGTAAGCCTTGGTGTAGGCTGATGCAATTTCC
TTCTCTCAGAGGGAAACAATACGTCATAAAAACATTTGACGTTACAAAAC
TACACTGCGGTGCAGTTAAGTGGTTGGGTTACTTAAGTGGCCTTTAAGTA
AATTTTTGGTTTTGTAGAAGTCAAATAGAAATGTCTAAATTTAGACTTTG
TCTTTGTATTTTAAATTTCGATGTTATATGTCCATCATTTGAAGTTCTAT
CATCACATTCTTTTGTGTTTCAGCTGTACAAAATGAAAGAGATAAGATCA
CCAGGAAACCTGCTGAAGAAGCTGAGCGTGTTTTATCTCCACAAACTCTA
GTGTCTGCTGAAATGTTGTCAAGGCCTTCTCACTCAACCAATGGTAAGAA
GTTCGATTTAAAAAAAAAGAGTAACTTAAATGTTGAGATGGTTGGGATAT
AGAAAACAAAACCTTGAAAAAAGCTATTTTTTAGAAATTTCATATCTCAA
CTTAGGAAAAGAGCTAGACAAAAATACTTGGAGATTTTGAGCCGATCAAT
TTTACTGGTGCATATCACATTTGAGAATCATTCTGAATTATGTTGTTTTT
ATTTATGGCCAGAAATGATGATGGAAGGTAGAGAGGCGACCAGTAACGAC
ATCGTGGAGTCAATGAAACAACAACTACTCGTTCTCGTTGAATGGGCCAA
GTACATCCCCGTCTTTTGTGAGCTTCCACTCGATGATCAAGTCTCATTGC
TACGTGCGCACGCTAGTGAACATCTTGTACTTGGCGTCGCTCGTCGCTCA
ATCATGTATAAAGACGCACTGTTGTTAGGTAATGATGATGTTCTTTAAAT
ATGACTTTTCGGGAACCAAATCTTAGAGTTCGTGACATCAGGACGCAACC
TCATGGATTTCTCCTTTTGAATGTTGAATGTATTATTTGAATATTTTATC
ATTAGTTTATTCAGATTTTTTGCAGAAAGATGCGTATTCGCAATGCTCAA
AACATGGCCGAGTTCGATTTTTGAGAAAAAAATTTTCCGGTTGAAAATGC
CGTTTTTGCAGATTTTCATTGGATTTTTCCCTTTATTTCTATGTTTTTCA
CACAAAAACATTATTGATAACAATGCTCACTATCAAGCATGATTCAATTG
TCAATAAAACTGATTTTTGGGACCACAACTTTCTATTTATTTTTTCCCTA
CAACCCTTCCCTCCCCCCCCCCCCCCCCATCAACAATCAATGATGAATTT
ATTGCGTTATGCATTTTCGCTAAACGCTATATTTCCTGACTGATTTTGTT
CATTGTTCTCCTCGCATTTATCTAACTTTCATCATCAGGTAGGTCCATTC
AGCATCTAGCTTGTTTAAGTTCAAAATCGCTGAGTGGCCCGAAAAATCGT
ATTTAGTCAAAGTCTTTTTCAGAGATATAATGATTTAATCATAGTCATTA
TAAAAAACTCTGGTCTGGCAATGTATTGTTTTAGCTTTTTTGTCAAATTT
TTCTTTGTTATAAATAAAAGGCAAGTTGCAATTTGCATACTTTTTATCAC
GTTACCAAATTTTCCCCTTGGGATTGGTCTATTTTCTAATCACATGATCA
AAAAGTATACAAAACAAGTCGATTTGCGAATGCAAGCTTTAACTGTTAAC
GAAAGAAAGAAACAAAAGCTTTTCAGACCGGGGTTTTTTATATTGACTAT
GATTTAACCCTTTCTGTGCCGATGTCGGCATATGCCGACATGCGAAATTT
CGACCTTTTGCCAAAAATTGATCATTTTTTAAAAGATTTTTCCATTTGAT
GGTTTGAAATGAAAAAAATGAATAGTTAAAAAATGAAGTGAAAATCGCTA
CTTTTTTCCAATGTCGGCATATGCCGACATTGGCAAATAGGTCGAGGGTG
TAAAAAAAAGGCCGGCATATAGGTCGAACCTTAAAAAATACGCACGGCAG
TTAAAGGGTTAATGAAGTCGTACGATGTCATTACATTTCGCTTTTCTTCA
TTTTGCACCATCAGGAAATGATTTGGTGATTTCGAGAGCACATCCAGAAC
CAGAGATTCGTCGCATTGCTGTCAAAGTGGTGGATGAGATCGTGAAACCT
ATGGTTGAGTTAGATGTTGATGAGACAGAGTACGCTTGTCTGAAAGCTAT
CGTATTCTTTAATCCAGGTATGTTATGATGCCATCCAGGAAAACGGTGAA
ATCTCATCAAAACATTTTGTCTAAGAAAACTAGAAGTTTTCTAATACCAA
GGTAACATTGAAATTCGAACTCATGGTCATTTTTCGCAGCTAACAGAGAC
AAAACTACATTAACAAAAAATCGCCAATCTCAAAATTTAAGGTTAGTTTC
CAGATAAAATTCTTGACTTTTGAGGACCTTTTGTCTCAATGGTTTCTTTT
TTTATTTGTCTTACTTACTCCTTTTATGATAAAGAACAGTTACGATTTTG
TTCTCAACTAATTCTGCTTTGATTTTCAAAAAAAATTAAAAACTCGAAAA
GTTACACCATTGTTTGAAATATAAAATCTTTTTTCGAGTTACGTAACTCG
CAAACTAAAACTTGTAAAAAATTCGAGTAGATAGATAAAAAAAATTAACT
TTTTCGAGTTGACGAAAGTTGACTGACGTCATAATTTGCGACTTTTGACG
TCACATTTTTCGTAACTCGGGTTTTGGTAGCTCGAGATTTTGTAACTACT
AAACTGATGACTGAAATGAGATTCGAACTCACGACTTTTAGCATTTCTAG
TGCAACTGTTCTATCGACTGAGCTATCCAGTCCACACTGGAAACAGATTC
GGTAACAGGGATATTTTTTATGGGACACTGTGTAGATTCTGTGTATTACT
CGTGATATGCACCATTGCATTACGGTTGTAAGTGAAGTAAAATCAGTCAA
TTCATGATATGCACCTCTGCAATGTCTTCTGACATTACATCACGGACCCA
ACAGCTAATTGGTTGTAAGTGACGTAAAATCAGTCATAGCGTCACTTTCA
ACCAATCAGCTGTTGAGTTCTTGGAAGACATTGCAATGGTGCATATCATG
AATACGTCACTTGCAACCAATCAGCTGTTGGGTCCGTGGGACACAATGCA
ATGGCGCATATCATGAACTCTTTGTTCTTCTTCAGATGCTCGTGGTCTGA
GCAACACAAAGAAAGTCAAACAACTCCGCTTCGAAGTTCAAACCTCGCTA
GAAGAATACATCAATGAGCGTTCTTTCGATTGTCGTGGAAAATTCGGTGA
AATGTTATTGCTGTTACCAACGTTACAATCATCCGCAGCCAACATGGTAG
AACAGCTGCAATTTGCACGACTTTTCGGTGTTGCACGCGTCGATAATCTG
CTACAGGAGATGCTGTTAGGAGGTACATACATTGATATCATGTTTCTCTC
AATAACTTAACTAAGTTGTTTTGGCAGCTAATATTAAGCAGTTATTGGAC
AAGGTCGTATCCAATCTGAAAAAATATTGGACGTACGAAAAAAAAGGAGG
TTATTATTTTACTAGAGGTTTAAAAAAATCCAATAACGATGAACATGAAA
GTATAAATGTTAAGTTACAAAAAATCATTCGTCGGTCAAAAATAACCGTC
GGTCAAAAATCATTCATCGGTCAAAAATCATTCGTCGGTCAAAAATTAAT
CGTCGGGCAAAAATTAATCGTCGGTCAAAAATTAATCGTCGAGCAAAAAT
TAATCGTCGGTCAAAAATGATCGTCGGTCAAAAATAATCATCGGTCAAAA
ATAATCATCGGTCAAAAATAATCATCGTTCAAAAATTGATTGTCGGTCAA
AAATGATTGTCGGTCAAAGATTATTTGTCGGTCAAAAATAATCGTTGGTC
AAAAATAATCGTTGGTCAAAAATTATTCGTCGGTCAAAAAGTATCATCGT
TCAAAAATAATCGTCGGTCAAAAATTATTCTTCCCGCAGGGTTTTATTGC
ACCTTGGCATATGGATTCGGTACAAAGTTTTTTTTCACATATCAATTTAT
AAATTTCTTTTCATTTCTATCGTAGGTTCTGGTGTTCAAGACCAATTAGA
CGCCCTTGCTATGCCACAATCACCCACTGAGATGGAACAACAAGCCGCCC
AAGCAGCCGTTCCCGGTGGTAGTAACGCTAGTGGTGTCGCCACGACAACC
AGCGGAACAACCGGTGCTTCTACCGCCGGCGGTGGAGGACCCGGGTGTCA
ACAATGTATGGGTCTATCGCAACTCTCATTCGCTGCCAGCCAACTCACGC
CAGCAACCGTTCAGAATTCCTTAAACTTACTGGAAAATCGTAACCTCTCA
CAGACATTAAGTAGTTTCAATGCAGCTGGGAACGTCTCTTCGGCGACGGG
AGGCCAACCTGTTACAATCCAGGATGGCGCGTTGACTGGCGCCAGTAGTC
TCGGA Coding sequence (CDS) from alignment at sc0000066_pilon:1522218..1527522- >XLOC_038461 ID=XLOC_038461|Name=XLOC_038461|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2952bp|location=Sequence derived from alignment at sc0000066_pilon:1522218..1527522- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCGGATTAAAAAGAGGAAACAATATTTCATCATCTGATTACGTGAA
ATTACGTAGAATAAGCGATACCAATGACATCCTATTGAGCAATTCAGACG
CCACTATATCTATGGATACAGATGTCCGGATTAAAAAGAGGAAACAATAT
TTCATCATCTGATTACGTGAAATTACGTAGAATAAGCGATACCAATGACA
TCCTATTGAGCAATTCAGACGCCACTATATCTATGGATACAGCAGCCTTT
GGCAGCAGTAGTTTATATCCAACTGGTGGTAACTGTCAGATCTGTGAGGA
CAAAGCTACAGGAAAACACTATGGTGCAATAAGCTGTGATGGGTGTAAAG
GATTCTTTCGTAGAAGCATCCGAAAGAATCAGAACTATAGCTGCAGGTTC
AGTAAAGATTGTAAGATCAGCAAAGACAATCGAAATCAATGTCGTTATTG
TCGATTGAGGAAATGCATCCGTGTGGGAATGAAGAAAGAAGCAGCCTTTG
GCAGCAGTAGTTTATATCCAACTGGTGGTAACTGTCAGATCTGTGAGGAC
AAAGCTACAGGAAAACACTATGGTGCAATAAGCTGTGATGGGTGTAAAGG
ATTCTTTCGTAGAAGCATCCGAAAGAATCAGAACTATAGCTGCAGGTTCA
GTAAAGATTGTAAGATCAGCAAAGACAATCGAAATCAATGTCGTTATTGT
CGATTGAGGAAATGCATCCGTGTGGGAATGAAGAAAGAAGCTGTACAAAA
TGAAAGAGATAAGATCACCAGGAAACCTGCTGAAGAAGCTGAGCGTGTTT
TATCTCCACAAACTCTAGTGTCTGCTGAAATGTTGTCAAGGCCTTCTCAC
TCAACCAATGCTGTACAAAATGAAAGAGATAAGATCACCAGGAAACCTGC
TGAAGAAGCTGAGCGTGTTTTATCTCCACAAACTCTAGTGTCTGCTGAAA
TGTTGTCAAGGCCTTCTCACTCAACCAATGAAATGATGATGGAAGGTAGA
GAGGCGACCAGTAACGACATCGTGGAGTCAATGAAACAACAACTACTCGT
TCTCGTTGAATGGGCCAAGTACATCCCCGTCTTTTGTGAGCTTCCACTCG
ATGATCAAGTCTCATTGCTACGTGCGCACGCTAGTGAACATCTTGTACTT
GGCGTCGCTCGTCGCTCAATCATGTATAAAGACGCACTGTTGTTAGAAAT
GATGATGGAAGGTAGAGAGGCGACCAGTAACGACATCGTGGAGTCAATGA
AACAACAACTACTCGTTCTCGTTGAATGGGCCAAGTACATCCCCGTCTTT
TGTGAGCTTCCACTCGATGATCAAGTCTCATTGCTACGTGCGCACGCTAG
TGAACATCTTGTACTTGGCGTCGCTCGTCGCTCAATCATGTATAAAGACG
CACTGTTGTTAGGAAATGATTTGGTGATTTCGAGAGCACATCCAGAACCA
GAGATTCGTCGCATTGCTGTCAAAGTGGTGGATGAGATCGTGAAACCTAT
GGTTGAGTTAGATGTTGATGAGACAGAGTACGCTTGTCTGAAAGCTATCG
TATTCTTTAATCCAGGAAATGATTTGGTGATTTCGAGAGCACATCCAGAA
CCAGAGATTCGTCGCATTGCTGTCAAAGTGGTGGATGAGATCGTGAAACC
TATGGTTGAGTTAGATGTTGATGAGACAGAGTACGCTTGTCTGAAAGCTA
TCGTATTCTTTAATCCAGATGCTCGTGGTCTGAGCAACACAAAGAAAGTC
AAACAACTCCGCTTCGAAGTTCAAACCTCGCTAGAAGAATACATCAATGA
GCGTTCTTTCGATTGTCGTGGAAAATTCGGTGAAATGTTATTGCTGTTAC
CAACGTTACAATCATCCGCAGCCAACATGGTAGAACAGCTGCAATTTGCA
CGACTTTTCGGTGTTGCACGCGTCGATAATCTGCTACAGGAGATGCTGTT
AGGAGATGCTCGTGGTCTGAGCAACACAAAGAAAGTCAAACAACTCCGCT
TCGAAGTTCAAACCTCGCTAGAAGAATACATCAATGAGCGTTCTTTCGAT
TGTCGTGGAAAATTCGGTGAAATGTTATTGCTGTTACCAACGTTACAATC
ATCCGCAGCCAACATGGTAGAACAGCTGCAATTTGCACGACTTTTCGGTG
TTGCACGCGTCGATAATCTGCTACAGGAGATGCTGTTAGGAGGTTCTGGT
GTTCAAGACCAATTAGACGCCCTTGCTATGCCACAATCACCCACTGAGAT
GGAACAACAAGCCGCCCAAGCAGCCGTTCCCGGTGGTAGTAACGCTAGTG
GTGTCGCCACGACAACCAGCGGAACAACCGGTGCTTCTACCGCCGGCGGT
GGAGGACCCGGGTGTCAACAATGTATGGGTCTATCGCAACTCTCATTCGC
TGCCAGCCAACTCACGCCAGCAACCGTTCAGAATTCCTTAAACTTACTGG
AAAATCGTAACCTCTCACAGACATTAAGTAGTTTCAATGCAGCTGGGAAC
GTCTCTTCGGCGACGGGAGGCCAACCTGTTACAATCCAGGATGGCGCGTT
GACTGGCGCCAGTAGTCTCGGAGTTCTGGTGTTCAAGACCAATTAGACGC
CCTTGCTATGCCACAATCACCCACTGAGATGGAACAACAAGCCGCCCAAG
CAGCCGTTCCCGGTGGTAGTAACGCTAGTGGTGTCGCCACGACAACCAGC
GGAACAACCGGTGCTTCTACCGCCGGCGGTGGAGGACCCGGGTGTCAACA
ATGTATGGGTCTATCGCAACTCTCATTCGCTGCCAGCCAACTCACGCCAG
CAACCGTTCAGAATTCCTTAAACTTACTGGAAAATCGTAACCTCTCACAG
ACATTAAGTAGTTTCAATGCAGCTGGGAACGTCTCTTCGGCGACGGGAGG
CCAACCTGTTACAATCCAGGATGGCGCGTTGACTGGCGCCAGTAGTCTCG
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066_pilon | genome | sc0000066_pilon:1522218..1527522 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1099-1476:379 |
| Aaloc | 862-1095:1269 |
| Aaloc | 709-858:2390 |
| Aaloc | 493-705:3792 |
| Aaloc | 373-489:4131 |
| Aaloc | 124-369:4735 |
| Aaloc | 1-120:5306 |
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