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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:1510994..1517338+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038452 ID=XLOC_038452|Name=XLOC_038452|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6345bp|location=Sequence derived from alignment at sc0000066_pilon:1510994..1517338+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACATGAATTTTTCGACATTGAGAAATAACAGTTGTATAAACAT
GATTTTCAcgtgttttatatttttacaaatattgAGTCTAGCCTCGTTTC
GGAGTCTCCCACCATCGCAAACTCCTGAAATGATTTTAAATGGTAAGTAA
TTATTAAgggtttcaatatttttcttttttgacattttagttttATCCAT
CTTGATATAGCTGCTAGCACCTCACTGATTCGTTGTGTTAATTGAGTTTA
AagcacagatttataaagcccaaagggctagaaatCGTGTTTTAAGCCAt
cgcaagcaaaaaaagtgaatagtGTGAGAAATATAGTTgcaattgttttt
aaaaatctgcGAGACTTCTGATTGATCAAGCGctaaaattatattgtaat
gtcacgtgacctagataggatttcctacctagaTACCGCacatttttcag
ccaaagcacgatatctagcccttcgggctttataaatatgTGGTTTAAAG
CTCCGAAGGGACTAGAGATGAATCTTTAACTTGACAATGACGGGATAAAT
CTAGTTCGCGGGTCATGCGTTTTGGACGGGAAAAAGTGGCTTTATTTGTC
ATCCAGGATTTTGGGGGCTTTGAAGTCAATGGTTGTGTTATAAGTAGCCC
AGGGTCCACTTCatgctttttgatagactggatggcgcgaccAAGTGGCC
TGGTAGTAAATGGTAATTCTctaatttttagttttacatGATAATTGGTT
TGGACGagataatgtttttatttgaaaatagggTAGTGCAAATCTAGTTT
TTGCCCTACTTCGAAGTTACTTTTAAATAGATTTTGTTTGTTAGTCCGTT
CGACCGTTTTCTTTTCTTGGGATCGGCCAGCATTactttatttctgattt
tttttgcattttttgtctGCATTTTCTTACTATTCTCGTCATTTCCTATT
TTCTTACACATAagtcttcaggtaggtccattcagcatgtagcttgtttg
cttggtttctcattttttcagcTCTACAAGATACCAGGCatttgagttta
aaaaaaacGCCCTCCAACGCCCTTAACGCCTATAtagtatcttttttatt
tttcagaaaaagatcTTTTCGAAGGGGACATTATACTGACACCAGAACAA
AAAGAAGGATTACGTAAAGCGCGTCTGTTGAAGCTCCATGGCAACAAGGG
ATTTAACAATGATCAAACCGCAAAACTGGGCCTACAAGCGTGGCCTTCAG
CTTATGTCCCTTATCGGCTGTCTCCAGCAATAGGTATAGTTTTATTTCCC
ATTATATTTACTGAGTCATGGAGGAAAAATTCATATTACGAGCAtaaatt
tgactgaaatttctttttcaagattcTACTGCACCACCAATGAGACCTAT
AAGTTTAGAAATGTTAATTTGCACTGAAAATTATTCTCCCTCGATTAGAC
ATTAGCGGACAAATTTCTTAACCAGAGGATCATCTTTAGCCAAGATGTTT
AGATctggtttagacggcccacctattctaattgtgGATCGAAATTGGCA
GAAATTTGACTGTCAGATCCATGCATTGCTTTCTTTTGATGTCAATGCAA
TGAATTTCAATACAATTTTCAAGCTAAGATTTCAACTGCCAACTTACTGC
CCATTCTAAATCATTAGAAAAGGTAGGGCATAAAGTAGGCCGTTTAAACT
AGAGCTTACTTATTTCCGATTTTTTATTGTGGCTTGGATCATCATAAGAT
TTGCGTTTTAGGTACGTTGCGAGAGATTCTTCAGGACTATTAAGTCCTCC
GtcgtcaaaaaaaacaaacacgtAAACTCGCTGTTGGCTCGGTTCCCGGT
TACCACATAATGGAGTCCTTGGAAACAAAactgtattttttctttttcta
caatAGGGAATTCAACTGAGGCAGTGAAAGCCATCGAAGAGGCAGCAAAA
TATTTGAGTAAATGGACATGCGTTAATTTGTATCAATTATCTCCTCGAAA
AAATAAAGACTATATTTACTTCGAAACATCAAGGTATGTCtacacccagc
tggcacacaacattgttacaacgttcatctaatgttatatgaatattaga
tgaacgttgaaacgacgttgtgtgccagctgggcagtCTTTTTCTATTTA
AGGATAATGTCCGATGGTTTGAAATCTCTCGCCTGAAATCTCTCGCCTTT
CACACACCTGCACAAAATGACTTAGTCTTTTCCAGGGACGATATAAGACC
CGGGGGATACTAGGCTTTGCGAGATGTCTGAGCCAACGTTCAAAAATCTT
cctttagagagactatttccacaaaatttcagccaaaattttcaaattta
ctcCATATTTCAAGAGTTTAGGATCCTTTGAGAgagtcgatttttgattt
tcgtaattttggaaccctttaAGAGACTCAATTACTTTTTAATGATcctt
gtacccctttgagggactcTCGAGGGTGTGAAAAGGCGGGACTTATGGTT
CGTTCATAcctggcacccattttgcctaagtaccccctcccccacaTACA
CACCCGGTTGATATGGtatatatttgaaatctctTAAAAGTTACTTATGC
GTCAAAGTTCTAtttttttCCTGTTAATTTATACTtgaatatctcgactt
tggaaaatagttgaACAATAACATGTGAGATTTTGCTTTGAATGCACGTC
TTGAATGTAGTGAAAGCACCCTAAATCTCTAGATTTATATATTTGAAAAC
GGCAATATGTTGTACcctaagttggtctaatatcgacatccctcgtctaa
ttccaacagccttctttagagaaagaaataatatgaaagcttgaatcact
gattgaaaaaggttctgaccactaagcaaagaaaaacagtttcaaccttt
ctatcaatttcaacTCTAAAAAGGGTGTTTGAATTGGATGAGtatgttga
tattagaccaagttacggtagctttttcattttgtaagcAGATAacgttt
agattttttttttgctcttttcaGCGTATGTGCGGCACCATTGGGTTATA
CGAAAGGCAAGAAGCGACAATCCATTGGTCTTTCACCTAAATGTTATTTT
TATACTTATGTGATGCATTTGGTCATTCACGCTTTGGGTGAGTACCCAGC
CGGCACTTGACGTCGCatcaacgtccatttgacattcataacgtccaaat
aacgttatttgaacgttaaaacaacgttgtgtgtcagctgttATTGGGTG
GTCCTTTGTCACATTTGTAACGACTGATCGCGCGGTTTTAATGGCGTCCT
CTCCTTATTTTTACGGTGGcccattgttatttttattatgGTCTCGTTAT
ATCTATGGTGGCCCTCATTTACTATTATGATGGCTCCCTTGCGTTATTTC
TACGTTGGCTCCTTGTCATTATCATAGCGGTCCTTCATTTCTTTTATGGT
GGCTTCTTACTTTTATGGTGGCTTTTTCTTATCCTTGTTGTTTTCATCGT
ACCTACCTTCTCACTTTACGAATGGTCTTTCTTAGTTGTAATATTATATA
CTGAACTTAAGTATAAAAGGTGATGCTTGAATAGGGCATAGGGCATTATT
CTTCTTTtcgtagggggggggggggggaagtTGATTAAAAAACGACCGTT
CGTGCAGCCGCACGGTAAGGTCTTTTACCTTGAATTCTTTAATGGTATTA
TGTGTATGAAtttctctaaaataaaaaaaacttcgcATTTTAGGGTATTT
TCACGAGCACACAAGACCCGACCGCGACAATTACGTCATAACAGACTACA
CAAGAACTCTTTGGCGTAAGTATGAAGATTTAGTTCCTTAACCTGACCAA
CTTGTTTCAAAGGAATGCAAATTGTTAAACTGATTGGTCATTGGAACTAA
TTCTAAAGAATCCGTAAAGAACTTTGAGAAAACAGAGTCaatttctgcaa
aaaattatGTCTGAGAAAATGAAGGTAACGTTACAatcttaaaatctaaa
aattgaaGATGGCTAATTTTTGCTAAGTTACAAACTCAAACTCGTCAATA
GAATCATTGAAAtacgttttgtttttaaaataattatcagaattaaaaaa
aagtgaattaaggGTCTGGGTTCAAGTTCGACATAAGACATAGGTGActt
tagaccatgtcgaacttattagagaaaaataagatttgtcgtTGTCATTT
TATTgccttttaacgagcgttgcactccttcgcatgttacCAGGGTATAC
TCTATTGTTTTAAATTCACCAGTGTAAAACCTTTCTACTCATCCCTCCAT
TCCACAGCTGATGTTTATAAAGTGTATTTCGAGAAATTTGAGCCTTGGAT
GACTGATGACACTTACAATAAAACGAATGCTGATTATGATTTCCTCAGTA
TTATGCATCCGCCCGTTGACTGGTTCACCATTGGTCCAGACACCATACAA
ACGCCCGTTTACTCCGCCCTTACGAATACaaaaaaaGGTAAAGACAATAT
CTAACGCGCCAACTTGATAAGCTGATTCAGTTTTTACGTATTGAATCTaa
cgattttcttttttcttgaggTGTATTTCTATTTCCTGTGCAGTGATCTC
TGAGTTAGTTTAGGGCCTATTTCCAATTGGGAAGGAGTGTGTCTTGTTTT
GTCTTATATCTCAATCTCAGTTTTGTCTTAAATTAATGAATTCGGTAAta
agtttgatttaaaattttcatccaGTAATTGTCAGAGAATCACATTTAGA
TTCAACTCTTTAACTCCTTTCGGGATCAATATTCTGCTTTAAATTGTACA
GaaaaaaaaCGATTTTCCGATGTTTTTGGTCCATAAAACCTAAACGAAAC
tcaaagcaaaatattttaccttgtttcttttaaaggaaaaatgaTCTTTC
CAAAACGCCATATTTTTGGTCCATAATACCCAAACGAAACCCAAAGCAAA
TTATTTTACCTCGTtttttcacaggaaaaaatggATTTACGCCATTCTTC
TGGTCAATAAAACCTCGATCGCAATATTCAGCATACACGTATGAAATGGG
ACAAAGATACACGCTTTCATACTGGGACCAACGTAAAATCGGTTTTGCTT
ATCACTGTCCTTATGACATGCATGGTGAATTTGTCAACTGTAAGTATATG
GAGAAAATTGAGTTTAAATCCTTCTTATAACTTTCTCAAGCCTTAAGATT
CACAACGCATTTataatgacggattgaatcctTGGAATATTAGTCTGAAT
AACAGACATCCAAAATAGGTAGCATGGATGCTATTAGCCTAAGAGGAAAT
CATTCAAATATCTTAACCCAAactttcgccaaaattgaaatatcttccAG
ATAAAGGTTTTTGAATTCCAACGCCTATGCTAAAAAATCAACGCTAATTA
TATTTGAGACTTTCAATAAATTGATCGtcctaatttcttttttctttgtt
taccaGTTCCCGTCGTTTTCCCGAAGAACTACAAGCCAGATACAAGTAAG
TAACTTATTCGTGATACGCCTACAATCTCGGGTCAAAATATACtgggaat
tttggttaattccacgttttcagcaatttaaagttcgggcaaattgataa
atctattcgaatatttcaattcgggaggggtttatagacttccagggcTA
TACTCTGAaccttattggaccattcttggactttagcgttaaaactcaga
gttaaaactctacccgtccaatataatttagagcgcttccaaatcgtttg
cggttgtaagatttcgtgggaacttcccttttttctcaaataatatgact
ttgattgtagtcATTTTCTAacgaaaacacccgaaaaagGTTTGACTTTG
ATCCCGCTCTGTTACAGAAACATGCTggtcaaaatccggcttttttcgGG
CGCTGATGTTATCTTGACTTACGCACAcctttggaaagatatttctaaGG
AGAATAATTAAGGTTGacaaagtaaaagttttttgaaaaattgaacaatg
AAGGTAGAAAAATGGAGAAcgagatttttgattttttaaaaccTTGCTGA
ATTTTCATTCAGCTGTGAATTAATATTTACTCGTAGTCCGCAGCGAACGT
TTTAACGAGGGAGGCCTTGTGAAAATTCCTGATGGACTCCTATGGGTGTT
TTTCATCATTAGGCATGACTTAATAgaattttgattcaattttcaGGTTG
TTACGATTTGACTGGATTATGTTTTGAATGGAAAGTGAGATACAACCGCT
GCAACAAAATGCATGAAGGTACATTAGAAGCACGGCAAACCAGACAATGG
TGTCGGCGAACGTGTGGCTTGTGTACAAGAACCGTTGTAACTTAA Coding sequence (CDS) from alignment at sc0000066_pilon:1510994..1517338+ >XLOC_038452 ID=XLOC_038452|Name=XLOC_038452|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2328bp|location=Sequence derived from alignment at sc0000066_pilon:1510994..1517338+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACATGAATTTTTCGACATTGAGAAATAACAGTTGTATAAACAT
GATTTTCAcgtgttttatatttttacaaatattgAGTCTAGCCTCGTTTC
GGAGTCTCCCACCATCGCAAACTCCTGAAATGATTTTAAATGATGGCAAA
CATGAATTTTTCGACATTGAGAAATAACAGTTGTATAAACATGATTTTCA
cgtgttttatatttttacaaatattgAGTCTAGCCTCGTTTCGGAGTCTC
CCACCATCGCAAACTCCTGAAATGATTTTAAATGaaaaagatcTTTTCGA
AGGGGACATTATACTGACACCAGAACAAAAAGAAGGATTACGTAAAGCGC
GTCTGTTGAAGCTCCATGGCAACAAGGGATTTAACAATGATCAAACCGCA
AAACTGGGCCTACAAGCGTGGCCTTCAGCTTATGTCCCTTATCGGCTGTC
TCCAGCAATAGaaaaagatcTTTTCGAAGGGGACATTATACTGACACCAG
AACAAAAAGAAGGATTACGTAAAGCGCGTCTGTTGAAGCTCCATGGCAAC
AAGGGATTTAACAATGATCAAACCGCAAAACTGGGCCTACAAGCGTGGCC
TTCAGCTTATGTCCCTTATCGGCTGTCTCCAGCAATAGGGAATTCAACTG
AGGCAGTGAAAGCCATCGAAGAGGCAGCAAAATATTTGAGTAAATGGACA
TGCGTTAATTTGTATCAATTATCTCCTCGAAAAAATAAAGACTATATTTA
CTTCGAAACATCAAGGGAATTCAACTGAGGCAGTGAAAGCCATCGAAGAG
GCAGCAAAATATTTGAGTAAATGGACATGCGTTAATTTGTATCAATTATC
TCCTCGAAAAAATAAAGACTATATTTACTTCGAAACATCAAGCGTATGTG
CGGCACCATTGGGTTATACGAAAGGCAAGAAGCGACAATCCATTGGTCTT
TCACCTAAATGTTATTTTTATACTTATGTGATGCATTTGGTCATTCACGC
TTTGGCGTATGTGCGGCACCATTGGGTTATACGAAAGGCAAGAAGCGACA
ATCCATTGGTCTTTCACCTAAATGTTATTTTTATACTTATGTGATGCATT
TGGTCATTCACGCTTTGGGGTATTTTCACGAGCACACAAGACCCGACCGC
GACAATTACGTCATAACAGACTACACAAGAACTCTTTGGCGGTATTTTCA
CGAGCACACAAGACCCGACCGCGACAATTACGTCATAACAGACTACACAA
GAACTCTTTGGCCTGATGTTTATAAAGTGTATTTCGAGAAATTTGAGCCT
TGGATGACTGATGACACTTACAATAAAACGAATGCTGATTATGATTTCCT
CAGTATTATGCATCCGCCCGTTGACTGGTTCACCATTGGTCCAGACACCA
TACAAACGCCCGTTTACTCCGCCCTTACGAATACaaaaaaaGCTGATGTT
TATAAAGTGTATTTCGAGAAATTTGAGCCTTGGATGACTGATGACACTTA
CAATAAAACGAATGCTGATTATGATTTCCTCAGTATTATGCATCCGCCCG
TTGACTGGTTCACCATTGGTCCAGACACCATACAAACGCCCGTTTACTCC
GCCCTTACGAATACaaaaaaaGgaaaaaatggATTTACGCCATTCTTCTG
GTCAATAAAACCTCGATCGCAATATTCAGCATACACGTATGAAATGGGAC
AAAGATACACGCTTTCATACTGGGACCAACGTAAAATCGGTTTTGCTTAT
CACTGTCCTTATGACATGCATGGTGAATTTGTCAACTgaaaaaatggATT
TACGCCATTCTTCTGGTCAATAAAACCTCGATCGCAATATTCAGCATACA
CGTATGAAATGGGACAAAGATACACGCTTTCATACTGGGACCAACGTAAA
ATCGGTTTTGCTTATCACTGTCCTTATGACATGCATGGTGAATTTGTCAA
CTTTCCCGTCGTTTTCCCGAAGAACTACAAGCCAGATACAATTCCCGTCG
TTTTCCCGAAGAACTACAAGCCAGATACAAGTTGTTACGATTTGACTGGA
TTATGTTTTGAATGGAAAGTGAGATACAACCGCTGCAACAAAATGCATGA
AGGTACATTAGAAGCACGGCAAACCAGACAATGGTGTCGGCGAACGTGTG
GCTTGTGTACAAGAACCGTTGTAACTTAAGTTGTTACGATTTGACTGGAT
TATGTTTTGAATGGAAAGTGAGATACAACCGCTGCAACAAAATGCATGAA
GGTACATTAGAAGCACGGCAAACCAGACAATGGTGTCGGCGAACGTGTGG
CTTGTGTACAAGAACCGTTGTAACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066_pilon | genome | sc0000066_pilon:1510994..1517338 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1018-1164:6199 |
| Aaloc | 979-1014:5459 |
| Aaloc | 814-975:4977 |
| Aaloc | 634-810:4310 |
| Aaloc | 562-630:3746 |
| Aaloc | 448-558:3026 |
| Aaloc | 322-444:1909 |
| Aaloc | 145-318:1109 |
| Aaloc | 1-141:1 |
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