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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:1444314..1450286+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038450 ID=XLOC_038450|Name=XLOC_038450|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5973bp|location=Sequence derived from alignment at sc0000066_pilon:1444314..1450286+ (Clytia hemisphaerica_ch_hm2_pilon)
atGTCATCCTTCTCAACTTCACATTTGGAGAAGCGAGTGAAAGCTTTAAC
CATGTCTCAACAGAGCATCCAAACACTCTCCTTGTGGTGTATCCATCACa
gaaaaagtgcaaaaattaTCGTCAAACATTGGTTGAAAGATCTCCTTAAA
GGTATGGATATTATATATGCTTTATAGCACAAAGagtaattttattgaaa
aaaaacacattacGTTAGGGCTACATAATAAACTGTACAATGTATTGCCA
GGCTTTTTCAATTTATTATCAGCTTGAGTAGCGacagggggggtcagtac
taaaatgtaagacatacatgagtactaaaaggattttcgctaatttttga
cataccaccacctatttttcgaaaatgttattttagtacacatgtactaa
aattattttgaccaatttaacatagataacACCCATATTTTGCCCTTTGG
CGGCTTTAAATTTActaaaatggggtcattgttacaaacctagttgaatt
tagtgcatcaatctgcaaaataatataattttattactaaactgtgctga
actgtacataaaaatatttttaaaaaatatttaaaaaagtggaaaaattc
tgaaagatttctgaagatttttttgaaaattcctgaaaaaaaaaatcaaa
ttttttccaaaattgttaaaaaaatgctccattttggctgattttagaac
aaaatactaagatttttcaaaaatttctttaagggaccactctttttggt
attttagtacacatggtactaaaattatttttgagcttttttgcagtacc
accacgtcactaaatgtcatgatgtctgagattttagtactgaccccccc
cccctggtagcgatatttacagaaagaaaattatttactgGTTTGCAAAC
CATATCGTCAAATATTTTGTATTGTATAGTCtaatgacaaagaaaatgaa
agaacaaaAATCAATAGAATAATTCATACTTTAATTTTTGGCAGCCAAAG
TCAAGAAGAAGTTAGCGTTGATGTATCTGGCTAATGATGTTTTACAGAAC
AGTCGAAAGAAAGGAACAGAGTTCAACCAAGAGTTTCGTATTGTCATGCT
TGGTGCTGTCAACCATTGTATACAGTAAGTAGGCTCCTCTATTCTAAAAT
AGATATACCTTTTTTGTAAAGatgatttcattttaaaaatgattaaagTT
TAGGTGAACCAATAATAATCGAAACTAGAATTTAGTGCTTTGGGACCACT
GCCTCCAACACCAAAACAACGATATATTCTGTATAGTTGATATAATAATC
ATATTGTAAATAGTAAGTAAGCTCCTCTATTCTAAAATAGATAGAccttt
ttgtaaagaaaatgtCATGATGAAAGTCTAGTTGAACCAATCATAATCGA
AAATAGACTTTAGGATAGTGCTTTGGGACCACTGCCTCCAACACCAAAAC
AACCATATACTCTGTATAGTTGATATAATAATCATATTGTATATAGTAAG
TAAGCTCCTCTATTCTAAAATAGATAGAcctttttgtaaagaaaatgtCA
TGATGAAAGTCTAGGTGAACCAATCATAATCGAAAATAGACTTTAGGATA
GTGCTTTGGGACCACTGACTCCAACACCAAAACAAACTCTGTATAATAAT
CATATTGTAAATAGTAAGTAAGCTCCTCTATTCTAAAATAGATAGAcctt
tttgtaaagaaaatgtCATGATGAAAGTCTAGGTGAACCAATCATAATCG
AAAATAGACTTAAGGTCATGAGTGGAATACCACAAGAAAGTTTTTTGGGA
TTACTGACACCAACATCAAAACAATCGCTCATTCTGTATAATTAATATAA
TAATCATATTGTAAATATCTTCTTGGCATTGTACTGGTAATGGAGTTTTT
CAACATGACATGGTCTTTGGAAAAACAGTGTCTCCCGAAAAAAGCAGACA
CATTTTTATGTataagtaaaatcctcataatttatgccaaattttGTGAC
TTTATACttatttttttgggacacactgtagtGCTTAATAATTTTCAACT
CCATAACCAAAAACCTCTGGATTTTTATTTAGTTATAGAACATTAGATTT
TGGGAAGCTtgtgaaattcttttgtttgcagttctaaaataacttttaac
tttttttccggTTCCTTTCTCTTACCAGTATGATATAGGGGTCCGTAGGG
AGAGCCTGGGGAATTTTTTCGTATCACCTAATTATAGGTAAATGAATATT
TTCGAGGAGTGCTCATCAGTACAAGTAGATCTGCAGAGCCAAATatctaa
atttattttcttttaaaaaataaaacgcaCTGACAGTGTAGTATAGTATC
TTCtgattttttaagaattaaattttgataaaaaatttgaagttaaTGAT
AGTAACAGATAGTAAAAGCACTGAAAACAATGTCACTAATAATTTTTGAc
tcattcttttttttcagtaCTGCAGACGATAAATTGGCTAATGCTTTGAA
ACGAATGCATGGGATCTGGACCGAGCGGAATGTTTTCGAAGAAGACTTCC
TTTCCACTATACAACAAGCTATCGGTTAGAAGACAATCAATTTATACGTA
TGAAAAAGATACAATGAAgactctttaattcgaaccgcTATAACtggaat
gtctccttaactcttTAACGACTGCGTCTTTTTATTTGTCCGTGCCTAAA
ATACCGCCGGCTTTTTCTACTGACTGTTCTTAAAATACCGCGGCTTTTTT
ACGTGCCATGCCAAAAATACTGATGACGAGATCTCTCATCATAACCTTGT
TTGAGGGTTCGTGACTGAATGACGAAATATATCGTCAAAAAGTTTATTGG
GGGCTCACTTCTATAACTTAAGAACGAAACGACTTTTTCGAAACccgcac
cccccccccaccaaatAATTGCGAGTTATCTCGTCATCAGTATTTTTGGC
ACGGAACGCGATGACGATGTATCTCGGCATCAGTATTTTTGGCACGGAAC
GCGATGACGAGATATCTCGTCATCGGTTGTTAAAGGGTTAACTCAACAAT
TTCtcttgtcccttcagttaactaTACCTTATAAagtttactccataact
cgaaacttccataattcaaacaaatttgtgtcccCCGTACGTATTCGAGT
CATGGAGACACCAGCAAGGTCTTACCAAtgactttatttttatttactgG
GTTTTATACTTCTTGTAGCAACCTTTGAAAGTACATGCTTTTATGAGCGT
AATGTTTAAGCATACTGAGACCTGtatgaaaaattaagcatatcaTATTA
AGCCTATAATTGAGTTTTGGCCATGGGTCATTCTTCTGGGTTGGTTGTgt
acttcattttcatttttattttcagttaaTTCTAAAAGATAGGTCAGCAT
AACTGAACCTGTTTTTCAATGTGGGtacatttctttcttttctatCCTCT
ACAGGTGGTGGTGAAAAGCAAGATGCGAGCACCACACCTCCTTTGGATCA
AATGCCAATAGATGAATCCGAATTCATGATGACCACTACTGATGAGCTCG
CCACCGCCACAACTGTCGCCCCAATACACCCTCCTGACCACCCTCCGGAC
GTATGTTCATTTCATTTACACCTTTACTAAAAAGTATTTTAATGTTCCAG
TTTTAAGACGACAACACTGAAGGTGAACGCAAGGTTGTGTGTTCAACCCC
caaccgggtcataccaaagattctcaaaatggtacttgatgcctctctgc
ttgattctcagcaattaagagaaggatcaaggctaagtggagcaatccag
ggaaaaAGAGTTGCGCCCtaccctaccttcgggtagatagctatctaAAG
AGAAGCCTTCCGGTCGCTTCCGACtgcagtcgcagacttacttacagGTC
AAAGATTTCCAGATTAATAATTACTGCGATTCCTTTTTGATTTGACAATA
AAACCTCTAAAATGCTTCATTGGTTTTCGACATTTTACTCCTGACACGAT
TGGAACCTACCCGACTAGAAgcacagttgatgctctcttattcgacgttc
tactattcgatatgctccccttattcgatgaaaatcataTTGctcttaaa
aatcgaattagagagaattgaCTGTACATTAAAAATCTAAGATTACggaa
aatgttttaatatttttttgttccaGCCGGATGAATTGGTGTTACGTCTA
CAAGAACTCGAACATTCGGCTACCCAGGATGCAGTTGTTCGTGAAAAGAT
TGCCAACTTACCGACTGAAGTCACTGATCCTACTTATATTGACAAAGTTG
AAGGTATTTcagggatcgaattagcgtatcgcatttcgcaattcgcgatg
cgtttttggattacttactaaaaattgaaaattgatccagtttaggatgc
aaaatcatgcttacaaaaaaattacGATTCCTGTATTTGAAGTAAAGAAG
ACCTTTTCGAATTCGAAAATTCAGTCAAGTCTCTAGAACCGAAACCTCTG
TTAGTAGAATTTCTACTTAATTCGAACAGTTTTTCTTGTCCCCTTCTAaa
taatgccttataaaccagtctcaataactcgaaaattccaTAACTCGAGC
AAATGTAAGTCCCCCGTacgtgttcgagttaaagagccTCTACTGTGATA
CCAAACTTGATTCGGTCATTCACAGTTCGAATCCTCCAAGCTAAGATTTA
GCGGAAAAATgtgaaataactttttaaagatattcttttttttatgcTAT
ACAATAGAAAGGAGGCGCCTTCTTATGCTGATGAAGTAGAAATTCTAAGA
TAGAATTCCTCAAAAAAGCTATTCTTCCTTTTGGTTAAGctttgtaagca
aatggtaggagataccTTAAATGATTATCCTATAAACTTTTACCATAGAT
TTGGAATCAGCTCGACATTTACAGGAGAAGATCAACAGCGCATGCGCACT
ACTCCAAGAATACAATACACGTTTATCAGTGGAACAAGTTGATCGCGAAC
AAACGCGCAAAATGTTGCTCGATTATACAACAATGCAACGATATCAAATC
TCACAAAccgaaaataaaattgatgtaaGTCGTCAGTCAGTTGaatcttt
taaatcaaattgttcttaaaggttttgttttttaaaataagagtgatatc
gtttccGGTCACTCATCAGTttaaatttacaagctttttcacattgaatt
gacacggatgtggagcaagattggtcagaaagaggaataaaatgagatat
gtgtctgatatgaaacgagaacGCTTATGTAAAAATTAAACCTTTAATAT
TCTCCATTGCAAACCAACCAACACGTCCAATAAGTTCACATAAAGTGCAA
TGGGTTCGCTCTGATGCatgcaattttaaaattacACTCTGAAATATCAA
AAACATCGATATtcattttaaactttgaagGGGAATATTAGTAATATGAA
Acttttcacctttcaatctttttcttctttctttctaaatttggacgaac
catagtccgtataaaaaagcATTGGTCTGGAAAcatattgttttaacttt
ttgttagctttttcctttgctaatatcaaaagataaaaatcgatttgctc
agtttttgattgCTTTACCAAGTATTCCTCTTGAGATTGGTTTATGATTT
AATCACAtgttcaaaaagtgagcaaaacaaactaatttctcaaatgcaag
ttcaagtaagaaacaatggaaagaaacaaagcTTCCAGACGAGGGTTTTT
TCTACGGACTATGAACGAACCTAAAGGACGAAAATCTgtctatttttttt
atctcataTAATTTTGTGGTCTTTTGTTTCAGGAATATTTGGGCAAGCTG
GAGAAAGTGAAAGCTGTGAGAAAAGAACTCAAATTACATTTACAGAACTT
ACCAGATCTAACGAAGTTACCGAGTCCAGTACCTCTACCATCAGCAGGTG
ATCTTTTCGCAACCAGGCGCTGA Coding sequence (CDS) from alignment at sc0000066_pilon:1444314..1450286+ >XLOC_038450 ID=XLOC_038450|Name=XLOC_038450|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1956bp|location=Sequence derived from alignment at sc0000066_pilon:1444314..1450286+ (Clytia hemisphaerica_ch_hm2_pilon)
atGTCATCCTTCTCAACTTCACATTTGGAGAAGCGAGTGAAAGCTTTAAC
CATGTCTCAACAGAGCATCCAAACACTCTCCTTGTGGTGTATCCATCACa
gaaaaagtgcaaaaattaTCGTCAAACATTGGTTGAAAGATCTCCTTAAA
GatGTCATCCTTCTCAACTTCACATTTGGAGAAGCGAGTGAAAGCTTTAA
CCATGTCTCAACAGAGCATCCAAACACTCTCCTTGTGGTGTATCCATCAC
agaaaaagtgcaaaaattaTCGTCAAACATTGGTTGAAAGATCTCCTTAA
AGCCAAAGTCAAGAAGAAGTTAGCGTTGATGTATCTGGCTAATGATGTTT
TACAGAACAGTCGAAAGAAAGGAACAGAGTTCAACCAAGAGTTTCGTATT
GTCATGCTTGGTGCTGTCAACCATTGTATACACCAAAGTCAAGAAGAAGT
TAGCGTTGATGTATCTGGCTAATGATGTTTTACAGAACAGTCGAAAGAAA
GGAACAGAGTTCAACCAAGAGTTTCGTATTGTCATGCTTGGTGCTGTCAA
CCATTGTATACAtaCTGCAGACGATAAATTGGCTAATGCTTTGAAACGAA
TGCATGGGATCTGGACCGAGCGGAATGTTTTCGAAGAAGACTTCCTTTCC
ACTATACAACAAGCTATCGtaCTGCAGACGATAAATTGGCTAATGCTTTG
AAACGAATGCATGGGATCTGGACCGAGCGGAATGTTTTCGAAGAAGACTT
CCTTTCCACTATACAACAAGCTATCGGTGGTGGTGAAAAGCAAGATGCGA
GCACCACACCTCCTTTGGATCAAATGCCAATAGATGAATCCGAATTCATG
ATGACCACTACTGATGAGCTCGCCACCGCCACAACTGTCGCCCCAATACA
CCCTCCTGACCACCCTCCGGACGTGGTGGTGAAAAGCAAGATGCGAGCAC
CACACCTCCTTTGGATCAAATGCCAATAGATGAATCCGAATTCATGATGA
CCACTACTGATGAGCTCGCCACCGCCACAACTGTCGCCCCAATACACCCT
CCTGACCACCCTCCGGACCCGGATGAATTGGTGTTACGTCTACAAGAACT
CGAACATTCGGCTACCCAGGATGCAGTTGTTCGTGAAAAGATTGCCAACT
TACCGACTGAAGTCACTGATCCTACTTATATTGACAAAGTTGAAGCCGGA
TGAATTGGTGTTACGTCTACAAGAACTCGAACATTCGGCTACCCAGGATG
CAGTTGTTCGTGAAAAGATTGCCAACTTACCGACTGAAGTCACTGATCCT
ACTTATATTGACAAAGTTGAAGATTTGGAATCAGCTCGACATTTACAGGA
GAAGATCAACAGCGCATGCGCACTACTCCAAGAATACAATACACGTTTAT
CAGTGGAACAAGTTGATCGCGAACAAACGCGCAAAATGTTGCTCGATTAT
ACAACAATGCAACGATATCAAATCTCACAAAccgaaaataaaattgatAT
TTGGAATCAGCTCGACATTTACAGGAGAAGATCAACAGCGCATGCGCACT
ACTCCAAGAATACAATACACGTTTATCAGTGGAACAAGTTGATCGCGAAC
AAACGCGCAAAATGTTGCTCGATTATACAACAATGCAACGATATCAAATC
TCACAAAccgaaaataaaattgatGAATATTTGGGCAAGCTGGAGAAAGT
GAAAGCTGTGAGAAAAGAACTCAAATTACATTTACAGAACTTACCAGATC
TAACGAAGTTACCGAGTCCAGTACCTCTACCATCAGCAGGTGATCTTTTC
GCAACCAGGCGCTGAGAATATTTGGGCAAGCTGGAGAAAGTGAAAGCTGT
GAGAAAAGAACTCAAATTACATTTACAGAACTTACCAGATCTAACGAAGT
TACCGAGTCCAGTACCTCTACCATCAGCAGGTGATCTTTTCGCAACCAGG
CGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066_pilon | genome | sc0000066_pilon:1444314..1450286 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 838-978:5833 |
| Aaloc | 664-837:4901 |
| Aaloc | 535-660:4177 |
| Aaloc | 391-534:3457 |
| Aaloc | 283-387:2469 |
| Aaloc | 154-279:997 |
| Aaloc | 1-150:1 |
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