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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000468_pilon:81148..85352- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038448 ID=XLOC_038448|Name=XLOC_038448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4205bp|location=Sequence derived from alignment at sc0000468_pilon:81148..85352- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCAGATTTGTTTCACTGGCGAATCAACTTGCCATTCGTTCACCGG
CCATATGTTGAAAGCCAACATGTGTTGTAATTGTATGAAAGACATTGCAA
AACACCGTAAAGAAGTCGTCGATAGTGAATCTTTGGTCAAGGTATGTTGG
TTTTGTTTACTTCAATATATTATTTTTGAAGTTTTCGGCTCAACGAGCGT
ATTGGATATATTATATACCAAAAGGTTTTCAAATATTATGTAGAATGGAA
ATATCTTTGTTAGCAAGGTCCAATCGAATGGAATTGGCTTATTTTGGTTC
CACATGACTCGAATTACTTCCTTTGAAAGTTGAATTTTGAAAGTCTGAAA
ATCGGGAATTTGAGATTTACGCATCAGTTTCAGCTCGTCGAACCAATAAA
CAAATTGGGTTGTTTGTAAGGTTTCACCCATCAGGACTCACATTATTGCT
GTTTTAATGTCATTGTAAGCACTTTTATTGTGTCAGAAAAAATTTAAATA
GTACTATTGTATAGCCTTTAAAGAGTACTATCAGAAAATGGTATGTTTCT
TTAGATTTCTAGTTTGTTCAATATGAAATTTAAATTCTAATCTTAAGTAT
CTTTTCAACGAGCACAGACTCCTAATCTGATTTATATTCTATCAAAAGTT
TGAGCGTTCCTTGATGTTTAGTATATTGAATTTTCAATTTATTTTTTTTT
TCAAAAGGCTTTAGAGTGCACACAAAAAGGTGAACGTATTCCGAGCTTGA
TTTTGGAGAAGGACGAAGTTTTCGGTCACGGCAAATTGTACCTTGGTGGT
TTCAAAGCGTGCACCAGTAGAGAATTCATTACTCATGAACAAGTAAGAGG
AGTTGTCAATACTGTTGGGAATGGTCTCTTTGGTTTGTTCGGTCGAAAAT
TTCAGGTGAGTTTTTTGACTTCAGTTTACTGTAGATGCTTTTCATATTGG
GACTTGGAAAATCAACCATGTGGTGGTGGGACCTGAAATTTTAGGTGGAC
CTTGAACCCCCCATGCACAATATGACTTTTTATCAGGCAACTTCATTTAC
TATAAGGCAAAGGGTTTGAATTTGGGTCTATATCTTGTGCGAGCAAAATA
TTTCTTAAATGATAACCTTTTTATCCAGGGCACATTTTATGTTTTTTGAG
AGTTACTGGATGACGCAATTATGTTGGCCGGTAGTATATGGTAGTTTTCA
ATTCTTTACTTAGATTCTAGTTCTTTTCGAGGGGTAAAAACTTTATTTGA
AAATAGGTTTGCAACTCCTTGTTTTATTCATGTCGGTTTTACTTTCAAAA
ATTAAATTTTCAAACTCTTTCACTGCTTTTAAATCACATATCAACTCCCT
GTACGATCTCACTCACTATGTTACACGTTTTCTTTATAAGAACATCCAAA
ATTTTTAAAAGCCTTGGGATATTCTTAGCTTTTCGAGTTTTAAAGGCTAA
AAATCTTCTGAACTTTTTTCTTAGTTTCAACATTTTGTGAGTATTTTTGT
TCATTTTCCTAGGAAAATACTCTTAGGGGCCAAATAAAGGGGGGGGGGAG
ATGTTAATAAACGGGGGCGACCTAATTGCCGGGAGGTTGGAAATTGTAAT
TCTGAAAACCCAAAAAATAAGGTAAATATAGGCCAAAATCAGGCGGTTTA
GAGCAAAATAAGGGACCTTCTCTTTGACAGCTGAAAAAATTCTTAAAAAT
TAATAAACGGGGGGGGGCCTTATAAGGTCCGGGGGGGTTGTAGAATTTTC
GAAAAATTAATAAGCGGGGGGGGGGGGGCGTTTATTTGGCACCTAAGAGT
AGGTGTTTTAGGGCCCACAAAGCCTTAAAATGTTCTTAACTTGTTCTTAT
ATTTTTGCCATCGAAGCCTTATGTTCTTATAATAATTTGTTCTTAAAAAA
AGTGCATTTTTTCTCACCTGTCAGAGTACATACGAAGAAGTCATGAAAAC
AAACCAAGTGGACTACATCGAAGTGGAATGGGAAGACAGTCTTGCTTTCC
ATATACCGGAACATGAAATGAAGCATGTTCTCCGTCACATTCACAGCGTG
CGGACGAATGGAGGAGCAGTTCTGGTGCATTGTGCTCAGGTAAGGAGAAA
CGACACGATGACGGTTTCTAGGCCAAACGAAACGTGGTTTTTATTCGCCA
GTTAATGACATTATACTTACTACTGGTTGTTTCAATTGACGTTAACTAAA
AATGGGCTTTTCCAAAAAAAAAATTGAATATAGGGGGTGGAGGACATAAC
GTTTCTGGGAAATTTACCCCCTGGACATTGTGACTTTTGACCCCCCCGGA
CAGCAGGTCTAAGCCCCTGGACAAGCATCAGTTGACCCCCTGGATATTCA
AAATTAACCTCAAACAGAACAAAATTACCCCCAAACAGAGCAAATTACCC
CCCGGAAAAGGCAAATTTTATAGATTTTTCACTACCGCTGGACACAATAT
CCTCCACCCCCATGTACGGACATTTTCTGGACGAGCTCAATGCATTGAAT
CCATGGCGTTCTAAATTGAATTTAGAACGCCGTGATTGAATCTAGTCTTT
TCTCCTTTTGAAAGGAGACAAGACAAGACAAGACAAGATGACAAGGGCTT
TACCCCGACCTTTACATATCACCGGACAAAGCCATATCCGCCATATCTTT
GATCGGAGTTCGACTTTTTCGAATGTTTGGAGCCCGGGTTTTCGGGCTCT
AAACATGCGATTTTTTGACGTCTCTTCTACATTTCGAAGCTACTGCAGTA
GCGAAAAAATCGAATTGCTTCTAATTTTCGAGAATGAAAAATCCCGGTTT
TTAGTGAGGTACTCGCTATTGTAATGTTTACAATTACACTGCTTTTTAGT
AGTGTTACCATTAGGGAAACACTCTCAAAAAAACTCTGATCAAAGATTTT
TGCTTGTTTGGAATTAAGAAACTTTGTCCAAGGTAAATAAGGCTGGCTTT
TACACGCTTTTTTACAAGACTGGTGTTTTTTCATTTCATCATGGATATTC
TTAACTTTTTGGCGAAAATCATTCTAAAATATACGGTATTCTTAGGTTAA
GATCGAAATTCAACCTAGATTTAACATGTAATACACGCCTGGAGAATATT
GAGCGTTACTGGGTATTATTGGCAATTTACAGGTGAAAATGCTTTAAAAA
TAGCATTATTAGCTTTAGTTGCTATATTCCATAATGGTGATATTCTTAGC
GTATTCTTAATTTTTTGGCCATTTTCATCATGGACATTCTTATAAAGTGT
ATTCTTAAAAACAAGCGTGTAGTTATTTAAGGGCTACATACACTACACAA
TATATTGTCAGGCAATATATTGATGATATATTGCTGAATGTCGGCAATAT
ATTGAAAAGGTGTCCGCAATATATTGTCAGCTCGATTTGCAATATTCCAA
CAATAAAGGGGGATTGTTTACAGAAAGAAAATTCCTTTTTATAATAGAGT
ACCAGTTGTTTGCTTCGTACATTACGGTCCGCAAACCATATTGTCGAATA
TTGTTCGTCAATATATTGTGTATTCTAAGTAGCCCTTTACACTGTTCTTT
TCTCCTCAACCAATCAGGGTAAATCTCGTTTCTCCTCAACCAATCAGGGT
AAATCTCGTTTCTCCTCAACCAATCAGGGTAAATCTCGTTCCTCCTCAAC
CAATCAGGGTAAATTTCTCCTCCTCAACCAATCAGGGTAAAATCTCGTTC
TCCTCAACCAATCAGGGGTAAATCTCTCGTTCCTCCTCAACCCATCAGGG
TAAATCTCGTTCCTCCTCAACCAATCAGGGTAAATCTCGTTCCTCCTCAA
CCAATCAGGGTAAATCTCGTTCCTCCTCAACCAATCAGGGTAAATCTCGT
TCCTCCTCAACCAATCAGGGTAAATCTCGTTTCTCCTCGACCAATCAGGG
TATATCTCGTTCCTCCTCAACCAATCAGGGTAAATCTCTTTTCTCTTCTC
AACCAATCAGGGTAAATCTCTTTTCTCTTCTCAACCAATCAGGGTAAATC
TCGTTCCACTACAGCAGTTGTGGCCTACCTCATGTGTCTTCGCAAGATGA
GTCGTGATGATGCATTCAAATTTGTGAAAGAAAGAAGGAAAATGGCCGAA
CCGAACGCAACTTTTATGGAATTTTTACGGAAGTTCGAATCTAGTGAATT
GTTAACAACTTTATCGAATGAATTCAGTGAGATTGGTTCCTTGGAGGTAA
AGTAA Coding sequence (CDS) from alignment at sc0000468_pilon:81148..85352- >XLOC_038448 ID=XLOC_038448|Name=XLOC_038448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1434bp|location=Sequence derived from alignment at sc0000468_pilon:81148..85352- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCAGATTTGTTTCACTGGCGAATCAACTTGCCATTCGTTCACCGG
CCATATGTTGAAAGCCAACATGTGTTGTAATTGTATGAAAGACATTGCAA
AACACCGTAAAGAAGTCGTCGATAGTGAATCTTTGGTCAAGATGGATCAG
ATTTGTTTCACTGGCGAATCAACTTGCCATTCGTTCACCGGCCATATGTT
GAAAGCCAACATGTGTTGTAATTGTATGAAAGACATTGCAAAACACCGTA
AAGAAGTCGTCGATAGTGAATCTTTGGTCAAGGCTTTAGAGTGCACACAA
AAAGGTGAACGTATTCCGAGCTTGATTTTGGAGAAGGACGAAGTTTTCGG
TCACGGCAAATTGTACCTTGGTGGTTTCAAAGCGTGCACCAGTAGAGAAT
TCATTACTCATGAACAAGTAAGAGGAGTTGTCAATACTGTTGGGAATGGT
CTCTTTGGTTTGTTCGGTCGAAAATTTCAGGCTTTAGAGTGCACACAAAA
AGGTGAACGTATTCCGAGCTTGATTTTGGAGAAGGACGAAGTTTTCGGTC
ACGGCAAATTGTACCTTGGTGGTTTCAAAGCGTGCACCAGTAGAGAATTC
ATTACTCATGAACAAGTAAGAGGAGTTGTCAATACTGTTGGGAATGGTCT
CTTTGGTTTGTTCGGTCGAAAATTTCAGAGTACATACGAAGAAGTCATGA
AAACAAACCAAGTGGACTACATCGAAGTGGAATGGGAAGACAGTCTTGCT
TTCCATATACCGGAACATGAAATGAAGCATGTTCTCCGTCACATTCACAG
CGTGCGGACGAATGGAGGAGCAGTTCTGGTGCATTGTGCTCAGAGTACAT
ACGAAGAAGTCATGAAAACAAACCAAGTGGACTACATCGAAGTGGAATGG
GAAGACAGTCTTGCTTTCCATATACCGGAACATGAAATGAAGCATGTTCT
CCGTCACATTCACAGCGTGCGGACGAATGGAGGAGCAGTTCTGGTGCATT
GTGCTCAGGGTAAATCTCGTTCCACTACAGCAGTTGTGGCCTACCTCATG
TGTCTTCGCAAGATGAGTCGTGATGATGCATTCAAATTTGTGAAAGAAAG
AAGGAAAATGGCCGAACCGAACGCAACTTTTATGGAATTTTTACGGAAGT
TCGAATCTAGTGAATTGTTAACAACTTTATCGAATGAATTCAGTGAGATT
GGTTCCTTGGAGGTAAAGTAAGGTAAATCTCGTTCCACTACAGCAGTTGT
GGCCTACCTCATGTGTCTTCGCAAGATGAGTCGTGATGATGCATTCAAAT
TTGTGAAAGAAAGAAGGAAAATGGCCGAACCGAACGCAACTTTTATGGAA
TTTTTACGGAAGTTCGAATCTAGTGAATTGTTAACAACTTTATCGAATGA
ATTCAGTGAGATTGGTTCCTTGGAGGTAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000468_pilon | genome | sc0000468_pilon:81148..85352 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 505-717:214 |
| Aaloc | 340-504:2282 |
| Aaloc | 142-339:3499 |
| Aaloc | 1-141:4206 |
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