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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000468_pilon:86416..90002- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038447 ID=XLOC_038447|Name=XLOC_038447|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3587bp|location=Sequence derived from alignment at sc0000468_pilon:86416..90002- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCTTTCAGGGCGATTGTTAGCCCGTAGTTTCAAACTTGTGAAATC
ATCATGCGCAATTGGAAACGCTTCTAAAGGTATATCATTTTTATTTTGCA
TGTTGCCTAGTAAAGAGATTAAAATCCAATGAATTGTCACCAGCAAGAAT
AGCTGTAAAACTTGAAATGTAACCAACATCCCACAATATTGACCTCTTGA
ATGATTTCTTGAATTGACATGCTATACATGTTTTAGTATACATCAGTAAA
CCTTTTTGAAAAGAGTTTAAAAATAACTCTCATAATATGTAATTTGTATA
AAACTGTTAAATTGTTTATGTTGCCTTAAAAACTTTATTGAAACCAAACA
GCTCTTGGTACTTTCATTATATCATGAAAAATATAATATATTTATCCAAA
CTGCCATAATTATCTTGAATTCTTGAAATAATAACATACGTTTTGAATTG
TTTTCAGACATGACAAGACGGGCCTTAGGTGTTTCCATTCTTCCAAAAAT
TCAACCACTTCGTCTATCAAGTACTGCAGTTTCAACACAAGGTTTTGTAA
AACATTTATTTCCTTATTCAATTTTTATACATTATTCTTCTTTTGAAGAA
ACAATGGCTAAGTGATAAAATGATTGCATTTCAGCTTCAAACTAATGGGT
GATTTTGTTTCTACCTATCTTAGAAACATTAAGTTTTGATGAAAACTGAT
TGTTTTAAATCTTCCCAAACTGATATAGTCGTTTTCAGCAGAACGTCATC
TTATTGATTTGTCTTTTACAACACATCAGTTACAGAGTAATTTGTTATTC
AATAGACCGTCGTCAGTTGTCTCCTAAACAACTATTATGAAATGCGGCTC
TTTCCAAATTTTACTTCATTCATAGACGATCCAACGAAGACCAAATTGCT
CGAGTTCGGACAATTCGTTGCTAATTCAATGCCAAAGTATGTGCAAACGT
CTCAGGTAAGAAATTGTAATCATTACAATGAGATTTCGCAACAAGCCATT
GCATTCTGATTCATTAGTGCTTTTGAAAGGTATGATTACATAATGATTAT
CATATACATCAATATTAAACATGTTATAAAACCATAAGATGTGCAACCAA
AAATCAATGGAACTTAACACATACTTTTAAAAACGTTATGGAAAATATAT
CATCTTATGCTTCATATTTTGGATCAATTACAAAACGTTGTAGGGTGACA
AACAAAAACTCCTTTCGAAAAAGGGAAACTTATATCCTAATTAATTAAAA
TTTCGAAATTTTGAATTTAGCTCTACCTTGTTACAGAGCACTTTGTCACC
ACAAGTTACTAATGTTGTTGAACCTAAATAATTATTGAACTTAAACACAA
TTCGCTCTATTTCAACAGGTAACAGAAGGAAATGAGTTAGAGATTTTGAT
CTGTCCAGAGGGTATCATTCCTACATTGACATTTCTACGTGACCACACCA
ATGCACAGTTCAAATTACTTATGGACCTGACCGCTGTGGACTGGCCATCA
AAACCATTCCGATTTGAGGTACCTATTTTTTCGTTTTTTAAACGCATTTT
TAGTTCCAACAGTCAGGCCATATTTTAGAAAGGTAGGGCAGCATCTGTTG
ATGTCCAAAAAGGGCACTTTTTCTTGTGTTTTTCCACTGAAAAGACTGTT
TTTACCAACATTTTAGTGATTTCAGAAACAGAAGGGGACATCGTCTGGTA
GCCGGGCGCTAAAAGGGCATGAAAAATTGTCTGACAGTGCTATTTGTTTA
AAACTTAGTGTAAGTTTGACCCAAGTAAATGATTTCCATTGCTTTTTGCA
GGATCAGCAACAGATTAATATAATATGTCTATGTAGATTAGATTTACCCT
AACATTAACAACCAGAAACCATAATGTTTTTCCTATTTTTCAGATTGTGT
ATAACCTTTTATCAATCCGTTACAATCAAAGATGTCGCGTAAAAACATAC
ACTGATGAACTTACACCCATTGATTCCGTTTCCCATCTCTTTGAATCTGC
CAACTGGGCTGAACGAGAGGTAAGAATAAAGATCTCTAAATTTCTGACTT
GAATGTACGTCTCTATGGCAACTTTCACTCAGTTGGTTGAAGCCTATCTC
TGTCTTGAAGTTACAATAGAAGTGATTGGACTTTTTCAAAAAATGGTAGC
AAGAGTCGTGGAAACATCTCTCTGGTTTTATTTTAAGAATACACACAGTA
TTCCATTCTCTAGTCTTCTTTTCTAGAGTTTGATTAAACACGTCAAAATC
TTTTTATCGTAACCCCAAATACTTCCTGGGAACGATGAAAGAATTTGACG
TGTTACCCAGTGACGTGTTACAGACTCTAAAACACCGATTTCTTAGGAAA
ATGGACAAAACTGATCAAAAAATGGTGCAAATACGAACATGTTAAGAACA
TGGCTTCAAAAATTTTGGATGTTCTAATAAAAAAAAGTGCACTACTACTT
CTATTGAAATTTCAACATTTTCAACTGATCCAATTCTTTTTGTTTTTACA
GGTCTGGGATATGTATGGTGTATTCTTCTCTAACCATCCCGACTTGAGAA
GAATCTTAACTGATTATGGCTTTGAAGGACATCCATTCAGAAAAGATTTC
CCACTAGCTGGCTTTTATGAGGTACTCTTTTGTCCTTTACCGTAGCTTTG
GATGGTTTAATAAGCATTTATAAACTCTGCTAATAGTTTTTAACAGTAGC
AGACACTACTTTTGCATTGTGAATATTTAGAGAATGTGTAAATCTTTCTT
TGCATTTTGTACCCCAACTTGGTCTAATGTCGACATCCCTCATCCAATTC
CGACACCCTTTCTTCAGAGCTTCGAAAATAATAGAAAGGTCGAAACGTCT
CTAAAGAAGGATGTCGGAATTAGTTGGGGGATGTCGACATTAGACCAACT
TATGGTATTCTGAGAAATCTTGTGACTGACATGACGTAATGTTTTTCCCA
AAAAAGACCAGGTGTTTATCACTAATTTTGAATTAAAACAATACAACTGG
GGGTAAATGCCCGGGCAATTTTGTATTATGAATAAAGTTTTCTAAATAAT
GCACCGTTCAACGCGTTTAGTAATACCACTTTCGGCTCTACACCAGAGCC
AATGTTACCATATCATTCATTAGAACGGAAGTACATGTTTTCCGTAAATA
CCATGAAAACATAATATGCTCATACCCTGCGTGCCTTAGGCTGCACGCAT
CCCCTCTGACACGATTTGATATAGGGGATGCGTATCTTCTGGCACTTTAG
TATACATTTTTTATCGAATTAGATTTGGGAAATGTATGGTGTATTCTTCT
CCAATCATTCCGACTTGAGAAGTTTAAAAAAAAATTTTATCGAATTAGAT
TTTTATTTTAAAGGGATACATTAGTTTATTATATTTCTATCCATTATAAT
TTAGGTTCGGTATGATGACGAGTTGAAACGTGTCATTCAAGAACCCGTGG
AGTTTGCTCAAGAATTCCGAAAATTCGATCTCCAATCACCATGGGAACAA
TTCCCAAACCACAGAAAAGTCCGGCCAGAAATTGAGGCTGAAATTAAAGC
GAACGAGAAAAAACCAGAAGAAGAAAGCGAGAAATAA Coding sequence (CDS) from alignment at sc0000468_pilon:86416..90002- >XLOC_038447 ID=XLOC_038447|Name=XLOC_038447|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1644bp|location=Sequence derived from alignment at sc0000468_pilon:86416..90002- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCTTTCAGGGCGATTGTTAGCCCGTAGTTTCAAACTTGTGAAATC
ATCATGCGCAATTGGAAACGCTTCTAAAGATGGCTCTTTCAGGGCGATTG
TTAGCCCGTAGTTTCAAACTTGTGAAATCATCATGCGCAATTGGAAACGC
TTCTAAAGACATGACAAGACGGGCCTTAGGTGTTTCCATTCTTCCAAAAA
TTCAACCACTTCGTCTATCAAGTACTGCAGTTTCAACACAAGACATGACA
AGACGGGCCTTAGGTGTTTCCATTCTTCCAAAAATTCAACCACTTCGTCT
ATCAAGTACTGCAGTTTCAACACAAGACGATCCAACGAAGACCAAATTGC
TCGAGTTCGGACAATTCGTTGCTAATTCAATGCCAAAGTATGTGCAAACG
TCTCAGACGATCCAACGAAGACCAAATTGCTCGAGTTCGGACAATTCGTT
GCTAATTCAATGCCAAAGTATGTGCAAACGTCTCAGGTAACAGAAGGAAA
TGAGTTAGAGATTTTGATCTGTCCAGAGGGTATCATTCCTACATTGACAT
TTCTACGTGACCACACCAATGCACAGTTCAAATTACTTATGGACCTGACC
GCTGTGGACTGGCCATCAAAACCATTCCGATTTGAGGTAACAGAAGGAAA
TGAGTTAGAGATTTTGATCTGTCCAGAGGGTATCATTCCTACATTGACAT
TTCTACGTGACCACACCAATGCACAGTTCAAATTACTTATGGACCTGACC
GCTGTGGACTGGCCATCAAAACCATTCCGATTTGAGATTGTGTATAACCT
TTTATCAATCCGTTACAATCAAAGATGTCGCGTAAAAACATACACTGATG
AACTTACACCCATTGATTCCGTTTCCCATCTCTTTGAATCTGCCAACTGG
GCTGAACGAGAGATTGTGTATAACCTTTTATCAATCCGTTACAATCAAAG
ATGTCGCGTAAAAACATACACTGATGAACTTACACCCATTGATTCCGTTT
CCCATCTCTTTGAATCTGCCAACTGGGCTGAACGAGAGGTCTGGGATATG
TATGGTGTATTCTTCTCTAACCATCCCGACTTGAGAAGAATCTTAACTGA
TTATGGCTTTGAAGGACATCCATTCAGAAAAGATTTCCCACTAGCTGGCT
TTTATGAGGTCTGGGATATGTATGGTGTATTCTTCTCTAACCATCCCGAC
TTGAGAAGAATCTTAACTGATTATGGCTTTGAAGGACATCCATTCAGAAA
AGATTTCCCACTAGCTGGCTTTTATGAGGTTCGGTATGATGACGAGTTGA
AACGTGTCATTCAAGAACCCGTGGAGTTTGCTCAAGAATTCCGAAAATTC
GATCTCCAATCACCATGGGAACAATTCCCAAACCACAGAAAAGTCCGGCC
AGAAATTGAGGCTGAAATTAAAGCGAACGAGAAAAAACCAGAAGAAGAAA
GCGAGAAATAAGTTCGGTATGATGACGAGTTGAAACGTGTCATTCAAGAA
CCCGTGGAGTTTGCTCAAGAATTCCGAAAATTCGATCTCCAATCACCATG
GGAACAATTCCCAAACCACAGAAAAGTCCGGCCAGAAATTGAGGCTGAAA
TTAAAGCGAACGAGAAAAAACCAGAAGAAGAAAGCGAGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000468_pilon | genome | sc0000468_pilon:86416..90002 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-822:184 |
| Aaloc | 520-639:1087 |
| Aaloc | 394-519:1695 |
| Aaloc | 244-393:2220 |
| Aaloc | 166-243:2711 |
| Aaloc | 82-162:3129 |
| Aaloc | 1-78:3588 |
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