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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000390_pilon:228590..232504- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038391 ID=XLOC_038391|Name=XLOC_038391|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3915bp|location=Sequence derived from alignment at sc0000390_pilon:228590..232504- (Clytia hemisphaerica_ch_hm2_pilon)
TCACTCTCCTTGATTGCAGACGAGTTCAAAGATTTAGCGGAGAGCATTTT
GTTGGTTCTTCACTTGGAAGTTCGGATACATTGTTTTTTCTTCTTGGGGC
GCGCTATCAAAGAGGTTTGTTGATATTCTTTGATTTTTTTTTTTTTTTAA
CGAACACACCCTCGAAAAACCCCTGAATTTGACCTCTTTTAAGTATCTCG
CGACGTCACACGGGGCAAATTTCGAATTGTCTTGGTTATCCATCCCGTTT
GAAAGAAAATGACGTAATATTGAATCACATTTGACATGAATCACAGGCAT
TCGGTTTTTTTTTCAATAAACTGCGTCCAATTGTTTACTTTGGAAAAATC
TTTTCTAGCCATTAAGAATGGTTTCAGATGGATTTTTTAGATTAGTTCTT
TAGCAAGGCACCAACAGTTATAAGATGTAGTATTGATTTTTCCCTCAAAT
TATGACCACAACCGATTTTTTTTAATTTTTAGATTATTTTTATGAATGAA
GTAGGCCATTTTCGCCGAACAAGTCTAGTTAAAAGCACCTTATATTTTGA
TAGAAAATACTGCTGTAGTTTTGAACTAGCGTGAAAATCCACTCTACCAG
AAATTGTCTCTATTTTTTTCAGTCTAGTTACGTTTGCAATTTGGATTCAA
TCGAAGTAGACATACAGATCCCACAACTCTCCAAAGATTTGAAAGACATT
GAAGAGATTTGTTCGGCCGCTTTATCATACAAGAAGCTTCGGTATATCTA
TCATGGTATTGGATACCTGATGGCTTGCATCATTATCGCCAGCACTAGCT
ATATCAAAAAAATTAATAGGAATGGCGTTAAGAAAATGTAAGTTTTCCTT
CATTATCCCTTGTCTCTCTTTCTGTCTCACCTAGTGACCTTTATAAGCCA
TGGACCTTTATAAGCCATGGACACAGTGTCTCAATCCCGGCCAAGCAAAT
TCTTTGATCAGAGTTTCTTCGAAAGTAGTACCCTAATAGTAGCACCACTT
AATGTGGATGAAAAATTTGAAACAAAAAATTTCTTTCACTTATAAATTGA
CCCACATCAAGTAGTGCGACCATTAGCATCACTTTTCTTAAAAACTTTGA
TCAAAGATGGCGGATACATCTTGGTCCAGGATACATAAAGGTCAGTAGTC
TAATCGAGATTTAATGATGTGTATTTCCTAACTTTTCCTCGCGAGAAATA
GGTGTCTGATTTGAAACGTTGAATATGTATGCAGAAAAGTAATGAGCTCT
TCCAGAAAAAAAACTGTAGAAGAATGGAAGATGGCTCAAGAGTGTGGAAA
ATCTGTAAAATACTACCATGTCTGGGGCGTTGATTTGTTGCTTGTTCAAC
GATAAAATGCGTCCAGGGATTAAAGATCAAAATGTCGAGATCATAAAAAA
ATAGATCATCCAACACTACTGATCGGGTTTTTTTCTGGAAGATACAACCA
ATACATGAAGGAAAAATTAATCCGGATTTTTGTTTGTTTACCACAGGTGT
CAAAACATTTTTACCATACAGCAAGAACTCACCAACATCACAACACGTCG
TGAATGGAATTTGGATTTAGCTCGTCAATATTTCGAATTGTTGTACGCCC
ACCCTGATGTAAGTGTTTTACGACCGTTCTTTTTTTCTGAAACCGAGACC
GCTTTGTCAAATTGAAAGTTGACGACTCTAGCTTTTCCATACAATCTTTG
AGCGAGTCTCAAGTTTTTTGGCATGATTTTTTTCGGTTGTCTTAATTTTG
ATTCAGGACTTTTAGGAAGCATACATGTTCAAAACTAATACCTTGTCCAG
GCGATATCACCTAGTTTTTAGTATGAAAAAGGTTAAAAGATCAAATATTT
AACTATCAGTAAATATTATATAAAAAGTATTTCCAAAGTTTAAAAATTAA
ATTATTTATGTTCACGAAATTTGAAAGCCATAAAACTTTCATGTCGCAAT
TTTTTATACAAAGAGGTTTGGAAAATTGTTCATTTTAGATTCTCCATTCT
TGCGGAACAAGCAGTGTGCCACCGTTCGTCATTACTGTTCTCCGAATCAA
AGAAAAAACTAGCCTTGCCTGAGCGATCTTCCAATGGCTGATACGAAGCC
CTCTATGTGAATAGATATCGCCCTTTCGTTGTTCTTTTCCCACCAGTATT
TTGCTGAACGTCGTTCCCAGGTTCCCACTTAACTCCATCTCTGCGCAATC
GCTTTACATCGGGGCCACCTTGCATCCACCGCATACAAAGAGACGTTTAA
TACGTTTCAAAATCACGTTCAAAGTAGTTCTTGGTCGAAACGCTCTCTCG
ATCAATTCTACATTCTTCTCAATCTCCTGATCGTATCTGACGACCTCGGC
TTCCAGTATTCGAATCTGTTCTTCTTTCTCTCGGCTCTTTTCGGGCCATT
GCGATTCCTCAAGCTCAAGACGTCGCACCCAATAATTATCGATGACCATT
TGAAAATCACGTGCTCTGATACTTCTCTCCTGCTCTTTCAACTCTTGTTG
CTCCTTTTTGTATTTCTGATACAGCTCAAGATGTTGTCGCTCGTAAGCGG
ACAGGCACCAGTTGTCAAATTTCAGGCGGTTTCCTTTGAGTCGTTCTTTT
TCTTTCTTTTTGGCGTGTTGTTTTTGCATAGAGCGTACCACGTGTTGCTT
TTTCTCTAAACTGGTCACCGCGATGCTTTGAGTGTTGCGTAGATAATTTA
GCTCCTGCGTGTGTAGAAAATTCAAACAATTAATTATTGAGGTGCTAGAT
GGTTGGTTCATAGAGACCGACAAGAAATTCACTTTCTTTCAGGGGGTCAA
ACTGTGTCCAACATAGTTACGCTTAGTAGACCAGTTTGTGTTGTACAGGC
TCTACCTCAAGTGAAGTATGAATATTACCATAATTTCTATTTTGTTGAGT
TGCAAAAGGCCCTGAAGCCCATTCTCGCAACAATGGACGCGCTCAATGAG
CGCCCAGTCAGCACCTTGGACTGGCTACCCAATTCCCTTTACTTGTCAAG
TCGCCTGTGCACCAACAAGGTTTAATAACCACACACAGCCTAATTATGTT
TTACTCTTGGACCTACATTCAATTTATCAAAATAAAGACTTTTCTAGACT
TACATCGAATAGCGCTTCTTTCGAGTTGTATGCTCTATCCATTATTTTCT
CCTTTGGCACGAAATTGGACTTGATCTTCCCCTTGTGACGCATGGCCCTA
TTGCCCAAAAAAACGAAATCTGTTATGATAATGAAGTTCCTCTCAATCCA
AAATTAAAAAATTATCTCCTAATGAACAAAAAATTTTATTTTGAAAATAT
TGTATTTAAAAAAATTTTAGTTTTATTTGACGTCAATTTTTATTTTTACA
ATCGGAGATTATAATTTCGAGACATTGCTATCACTTTCGAAGGTCGTTGT
ATTTAAAGTTTTTATGGAGCTTAGCGTAGAGCTGAGAAAATAATTTAAAA
CATTTATGATATAAATTGGCGTCTGGCCACAAACTTTCAAGATTTTAGGT
GCGGCTGTTTTAAATGAGCGGGAAATGAAGGGATAACCTACGTGTATGGA
GATGGAGTCGTTTATAATCCGTGTAATATGGTTTTTATATGTTATATTAC
GATAATTGTTACGGGATAATACCAGTTTGTATAAACTTCAATTTTTCCCT
TCCCTCAGTTTTTGCTTCTTTTTTCAGGAGTCTGGTATAGTCGTCTAGTA
TGCTAAACTGCTAAGTGTGTATTTTTTTTTTGCAGGAGATTCTTGGCAAC
ATTAACGAGCAAGGGGCCAGATTCAAAGAGCAAGATTATGCGAATGCATT
AGAACTGTTAGCTCGAAGTGAAATACCCTTCAATGAACAAATGTGGAAAA
TACGACGCAATAAACTGAGTGAAATTCTTAAAGAAAAAGAACTGGAAGGG
AAAGTCATCAAGTGA Coding sequence (CDS) from alignment at sc0000390_pilon:228590..232504- >XLOC_038391 ID=XLOC_038391|Name=XLOC_038391|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1242bp|location=Sequence derived from alignment at sc0000390_pilon:228590..232504- (Clytia hemisphaerica_ch_hm2_pilon)
TCACTCTCCTTGATTGCAGACGAGTTCAAAGATTTAGCGGAGAGCATTTT
GTTGGTTCTTCACTTGGAAGTTCGGATACATTGTTTTTTCTTCTTGGGGC
GCGCTATCAAAGAGTCACTCTCCTTGATTGCAGACGAGTTCAAAGATTTA
GCGGAGAGCATTTTGTTGGTTCTTCACTTGGAAGTTCGGATACATTGTTT
TTTCTTCTTGGGGCGCGCTATCAAAGAGTCTAGTTACGTTTGCAATTTGG
ATTCAATCGAAGTAGACATACAGATCCCACAACTCTCCAAAGATTTGAAA
GACATTGAAGAGATTTGTTCGGCCGCTTTATCATACAAGAAGCTTCGGTA
TATCTATCATGGTATTGGATACCTGATGGCTTGCATCATTATCGCCAGCA
CTAGCTATATCAAAAAAATTAATAGGAATGGCGTTAAGAAAATTCTAGTT
ACGTTTGCAATTTGGATTCAATCGAAGTAGACATACAGATCCCACAACTC
TCCAAAGATTTGAAAGACATTGAAGAGATTTGTTCGGCCGCTTTATCATA
CAAGAAGCTTCGGTATATCTATCATGGTATTGGATACCTGATGGCTTGCA
TCATTATCGCCAGCACTAGCTATATCAAAAAAATTAATAGGAATGGCGTT
AAGAAAATGTGTCAAAACATTTTTACCATACAGCAAGAACTCACCAACAT
CACAACACGTCGTGAATGGAATTTGGATTTAGCTCGTCAATATTTCGAAT
TGTTGTACGCCCACCCTGATGTGTCAAAACATTTTTACCATACAGCAAGA
ACTCACCAACATCACAACACGTCGTGAATGGAATTTGGATTTAGCTCGTC
AATATTTCGAATTGTTGTACGCCCACCCTGATGAGATTCTTGGCAACATT
AACGAGCAAGGGGCCAGATTCAAAGAGCAAGATTATGCGAATGCATTAGA
ACTGTTAGCTCGAAGTGAAATACCCTTCAATGAACAAATGTGGAAAATAC
GACGCAATAAACTGAGTGAAATTCTTAAAGAAAAAGAACTGGAAGGGAAA
GTCATCAAGTGAGAGATTCTTGGCAACATTAACGAGCAAGGGGCCAGATT
CAAAGAGCAAGATTATGCGAATGCATTAGAACTGTTAGCTCGAAGTGAAA
TACCCTTCAATGAACAAATGTGGAAAATACGACGCAATAAACTGAGTGAA
ATTCTTAAAGAAAAAGAACTGGAAGGGAAAGTCATCAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000390_pilon | genome | sc0000390_pilon:228590..232504 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 442-621:181 |
| Aaloc | 331-441:2419 |
| Aaloc | 115-327:3294 |
| Aaloc | 1-114:3916 |
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