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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000051_pilon:1364223..1370557+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038382 ID=XLOC_038382|Name=XLOC_038382|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6335bp|location=Sequence derived from alignment at sc0000051_pilon:1364223..1370557+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAGGTGGAAACTTACCTCTCATATCACAAACAAGGAATGCAACAAAGAA
AGCAGGAGGATCGGTTAAAAGGCAAAATCATAACCGTAAAAGAAAAGGCA
AACGCTATGGACCAAAAGTTGATCAAggtaattatttaaaaaagaaattt
tttttgtacaatataCCATAGAAAGAATTATTCGCCTAGGGAATATAACC
TAActatctaaagtctgtctcaaaataatttgcagctggagacaaaaatg
gctgtaacttttgatagaattcgaatcaagttgcgactttgtgctcgtta
aaaagatattcgtgagttgaatattatcaagtaaaaataatttgaaaaaa
aaaaggaaaatgaaaatgaaaaatgaagaagaaaaaaatcaatttcttgt
agaaatgtggtataattaccattttcacaaaagtaattcttcaatcttag
attgTTGCTAAGTACCCTTCTGAGTGAGATTACGAAGAAGTGATTGGCTC
TAAACCCTATTGGGAAACATTTCactcattcatttcagacaaaaaggcca
attttgagaaaaaaagatcttttttcgactGTAAGGAAATtttactctgg
tctgtaaaatacacatttttactgcgaacttattgaaaatttgcacaaac
aatttttgatgCCTTTTCTAGGGccacataaagttttgatatgtttaaag
gcatatttcttgagatatgactaaaagaattgcctcactccatgaaagcc
cgcctacaactgcagccagaattgagaaaacgaaagtggttcatatctcg
agataggaaagttttcagacctctacgggggtcacatgaccaaaaatccg
ccattatggatacccaggtgagaaatccaggtggcccagaagcttaaaat
attcttattaccataaggaacaagaaaaaccccaagaaagttagtccacc
aaatggataagatacttcccggctcgtacctgtaTAGATCAccatcactg
tcaaaaaatttatcaaaaatattcattcaatcaaaagatatcaattttgt
cgatcaaaagcaaattattttgagacagaattTAAGTAACAATGGGAATA
AGACATTGCTTTCTTTTAATAGTTTAGCATTTAGCTTGTAAGAGATATTC
TTTTCTTCCCAATGAGAATGacaattgaatttaattttttctgctAAAGA
AGAATATACATTAGTTTGTGTGATACAAACTACTGACTGGGTGCGCGGCA
AAGAAAAGATTGTTTTCTTTGAACTCTTAAGTTGAGGAAACTTTGTCACA
TTgaaaaagggaaagataaacttaaatttttgattggtcaaaatttttat
cGACATTGTCTCCTAGTTTtgttaattattttcatttattaggATTCCCA
TAGCCTGGAGATCTGTGCGGCTTCCATTTCTATACTCCATATACTGGTGG
AgaaatgaatagcatggtttgggctaTATGAGTTTGAATTTCCTAGCTCC
AAAAACAGTTTGAAACATAGTCAGTCAAATTctgtttttatttcactttg
gttatactttttttagaaaaaaaatcaaggcAGCTCAAATCCGTCCTGTA
TACATtagtttataaaaatacaaCAGCGAGAATATATTTTGAgattctta
aaggttttatttttacataagtgttcccgtttcatatcaggacagtgtta
TATTATGccgatataagcaaaaaaaacgtttttctattcctctttctgac
caaccttgcttcacatccgtgtcaatccaatgtgaataaaccagctgcgc
tggaagctccggcttagagattaaaagatgtgaaagatgagtttgttgag
ttagttgtgttagaacgttgcccacaaactactaatcagaacagatcaga
aagcaaagtaataatcagaaagcaaagtaataattctattgcagcgaata
aataaaccagctggatagctcttctaagtgattacacatgcactttcttg
cttcAAGAACCAACACCAcccccccgcccactcatcctcgactaaaaagt
tcaaaattggagctaaaggagaaaaacatttagaagtcaatatttccaag
ttgttatgaatttatttttttctaaacttgccaatagcgaagctatgatg
cgccgttgatttgattgtccggataaaattttggggagaaaaatagccta
aattagaggccacagcTTTCAGCTAAgcgttattttttctgttgggataa
tacttggtggaggagagtaggataatccaaataaaatggtacaatagtgt
gtatgtaataaatattggtatatttggaaaaaacctgtttcgggtttgaa
aaatcttcaaaaggaacggtcgcccaagccaatgaaattacgacaaagtc
caaaaaaaatcattttcagttataacactgaaAATTTCTCCTATCTTGct
aaaatttacacaggaattgtgttttaatatcctttactgaattctcatag
tgatatgttttaaaaaaatctgtgtcgggtttgaaaaatcaaaaggaacg
gtcgccagccgcgatgaaattacgacaaagtccaaaaactatcattttca
gccataacactgtgaaaatttctccaatcttgttcaaacttacacaggaa
ttgtgttttagtatcctttactgaattctcatagtgatatgtttgtaaaa
aatctgtgtcaggtttgaaaaatcaaaaggaacggtcgccagacGCGATG
AAATTaatacgacaaagtccaaaaacgatcattttcagccataacactgt
gaaaatttctccaatcttgttcaaacttacacaggaattgtgttttagta
tccttcactgaattctcatagtgatatgttttaaaaaaatctgtgtcagg
tttgaaaaatcaaaaggaaccgGCCGCcagaaattacgacaaagtccaaa
aacgatcattttcagccataacactgtgaaaatttctccaatcttgttca
aatttacacaggaattgtgttttagtattctctattgaattctcatagtg
atatgtttgtagaaaatctgtgtcgggtttgaaaaatcaaaaggaacggg
tCGCCAGTCAACAATAATATGAAGTAATATGATGATGAATacacaaaaca
ggatcattttcagccatacacataacaccacaaaaactactcggatcgtt
ttcaaatttacactgtTATGTTGTAATTTcagtattttcttttgaattcc
aatggctgtgtgtttgcaagtttcattgtcaagttagaGTTTTATGATTT
TGTGTGTCTAGAagaagagaagttagccatatgcaagatttaagcactcg
atcagctgacgattcatggccaaaagtctttccacattgttagagaacca
gtatgcatcaaacttctcataaatcatgtccaaaacatcatgaataatga
tgaaaatgatcaatttttcactgagatttgcccatTCGCacggttggcag
acgatatcatactccaggatgcaagtgaaatttttcaatctgcggaccta
gacgggggttcggttattatcagttagggttagggttggagctcgagagt
cacaatataaggccgaaggccttcttaggggcatttgtaccctgtgactt
aacttaggatcccgtagggatccttgtaggggcaccggtagggttgggag
ctttcttaattagggtctgtaaattacacgctataagtatttgtgaatga
cagctttCTGTCGTGTCTCGTTGGCGTAAGCGGATAGGCATTGGGTTAGT
AAGcaaaggttgcttgcatttggtggttcgagccggggtttatctgatat
tccgatggcgtattggcggccgcccacgctaaagctctaaaggagcgggc
caatgaaaattttcccgaccttcagagctttagcgtgtcggaagaaaatt
tctacatcgggtgccagataaagccggggtcggagacctgtttcaccggt
acgggcaaatttcagaaaaatacttagaaaacagttaGaaacacttgaga
aagacagAaaatcaggatagaagataggaaagtagaaaataggaggaaaa
taagagacgatgcatcctggagtatgatatcgtttgccaaccattcgcta
cacagtcagctagcccactttcggcagccatttttttctaaatactttcg
gccaatcaaatcacaatattatcagaatccagataatccgtttttattaa
atcggaatagatcatcggattagataaacaaaaaaaaatgtcttgaccgt
tgtcggaagagagaattaaaggctcctaggccggagcaaaaagcGAATTA
AAAtcgacgagtaagcaaacgatatcactcttatttaaaaacaaaacctt
taaatctgAAATTAATCGATTCCGATTGGTCAAGCACTCTTCTGATGAAT
GAGAGTTCAACTCAACAAGAAGTTAAatctgaaattcaaaatttgataaa
aaatttaagatGAATTTAGCGTTATATTGAAACTTACAAGTCTATAGGCA
AAATCTAATGAAATAATTAGTTTTAGAAACAAATTGAAAtgatttcaatg
aaattttcctttcctTCTGAGACTTAAGTTTATGATTTGtgtttttgatt
tcaaacaaaAGCTTATTATAATGCAAAAGGTAAATgttattttcgttttt
atataaaaatttgataggtcaataTTTGACGCTTTGACCAAATTcctgaa
agtaacttttggcCCAAGGTTTAACCCACCAAAAGTTTATTTTCCCCTTT
CTTTCAAGTAGAGAAGGGTTAAGTTTGTTAAATATCACAGAACTTGAGGA
AATTTGACTGAAAGAAAGAAACACCCGCTATATTTCTTTGccattgtttt
ttcaaaacaacttgatatcatAttttttcatattTTAGGTGAATTAGTTC
AACCAGGAGCAATCTTGTTTCGTCAAAAAGGATTCCGAATGCATCCTGGC
AGAAATGTTagtatatActtttttttaagtgaaatgCAACAATTATAGTT
GTAAAGTaagatcactgacctttataaacatTGAGCACCATCTTCTCTAC
AGTATCCCGGCCAAAAACAATgtttaataaaagttttttgaaaatggtat
ccACTAATGGGGTTTGCAAtgtccgaaataccgaataatttttccgaaat
ttccgaaatttcgtaaaaaatacttgcaattccgataccgatattttttt
gggtatttttccttgttttgactaatttttcatcaaatttgatttttcat
gtatgaattccgaaaaagggggataaaaactttatcataccgaaatttcg
aagcaaaaattcatggatttccgatataTAGTGTGCAGAGAGGTCCAGtc
cccagcatttttcagggggagggggctaaaaacttttttcaagagGGATA
CAACCTTCCCTACAGCAaagttttttaacataattcaaaatatcttcaac
ctatcagctctgccttcagttctattacacaacactcagccccccaagca
agctagcccccagtattttttgaaaaatacagcctccaatcaagcaaaaa
tggtttagccccccctaagctcaggggggggtgcattctatgcaataccg
aaacaatttcagaattccgaaataccgaagggattttgcccgatttccaa
AATTCCGAAGAAGCAAGGGTCGAtatccgcaattccgaaataccgtacgc
cccctaCCTACTACTGATATGGGTCAAAGTGATTTTAAACCAAGATTTca
ttatattaaaaatttacCCACATTTAGTAGTGCTGTCATTAGATACCACT
TTTCTAAAtactctgatcaaagatggtCCAGACTTTATAAAGATCAGTGA
GAAGGATGCAATATTACTCTTATCTCTGACAGAATTAGAAAGTGATACCT
CCCACCttattttggtgaaaattttgataatgaaCTATAATTTTACCAAT
TCTTAATTATAAGACACCACAAAAAATGTATTAGGAAAGTTacgatttga
ttttttttaaacataggTAAACTGATTATGCGACACTCGCAAAAAAgtta
tgaattatttttttcttgctttttttaaaaggtTGATTACGGTAAAGACC
ACACTTTGTTTGCGTTACGCGAAGGAAACGTTGCAATAACCAAAGAGCTT
GTTGAACGTCCTCAATGGTTCAAATGGGGTGAAGGACCTTATTTTGAAAG
AACATTTATTCATGTGGAAGAACGACCTAAAGTTCGACGTATTATTTGTA
AAAACCCAGAAAGTTTAGCTAAATTTTATTCTTGA Coding sequence (CDS) from alignment at sc0000051_pilon:1364223..1370557+ >XLOC_038382 ID=XLOC_038382|Name=XLOC_038382|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=798bp|location=Sequence derived from alignment at sc0000051_pilon:1364223..1370557+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAGGTGGAAACTTACCTCTCATATCACAAACAAGGAATGCAACAAAGAA
AGCAGGAGGATCGGTTAAAAGGCAAAATCATAACCGTAAAAGAAAAGGCA
AACGCTATGGACCAAAAGTTGATCAAgGTAGGTGGAAACTTACCTCTCAT
ATCACAAACAAGGAATGCAACAAAGAAAGCAGGAGGATCGGTTAAAAGGC
AAAATCATAACCGTAAAAGAAAAGGCAAACGCTATGGACCAAAAGTTGAT
CAAgGTGAATTAGTTCAACCAGGAGCAATCTTGTTTCGTCAAAAAGGATT
CCGAATGCATCCTGGCAGAAATGTGAATTAGTTCAACCAGGAGCAATCTT
GTTTCGTCAAAAAGGATTCCGAATGCATCCTGGCAGAAATgtTGATTACG
GTAAAGACCACACTTTGTTTGCGTTACGCGAAGGAAACGTTGCAATAACC
AAAGAGCTTGTTGAACGTCCTCAATGGTTCAAATGGGGTGAAGGACCTTA
TTTTGAAAGAACATTTATTCATGTGGAAGAACGACCTAAAGTTCGACGTA
TTATTTGTAAAAACCCAGAAAGTTTAGCTAAATTTTATTCTTGAgtTGAT
TACGGTAAAGACCACACTTTGTTTGCGTTACGCGAAGGAAACGTTGCAAT
AACCAAAGAGCTTGTTGAACGTCCTCAATGGTTCAAATGGGGTGAAGGAC
CTTATTTTGAAAGAACATTTATTCATGTGGAAGAACGACCTAAAGTTCGA
CGTATTATTTGTAAAAACCCAGAAAGTTTAGCTAAATTTTATTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000051_pilon | genome | sc0000051_pilon:1364223..1370557 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 199-402:6132 |
| Aaloc | 133-198:4941 |
| Aaloc | 4-129:1 |
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