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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000134_pilon:478078..480406- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038376 ID=XLOC_038376|Name=XLOC_038376|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2329bp|location=Sequence derived from alignment at sc0000134_pilon:478078..480406- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTGAAGAAGAGATGATGAGACAGATGATGGGTTTCAGTGGCTT
TGGTAAGAACTGTTTTGCATTTTTTTCCCTTGATTTGATAATCAACATCT
AATTTCAACAATTTTTGTGCTAAATATTTTGAGGTAATAAATCACAATAT
GGTTCCCTCCGAATTCAAAACACTATTTGCTAATTTTTTAATCAACTAAT
ATTTGATAATCAATCTACAAAGTACACGTTAAGCCTTTGGATGTTCTTAA
CTTTTTGAGTTTTAAGCCTAATGTTCTTACTTGTTCTTTAACATTTTGGC
CAGCGAAGGCTTATACTGTTCTTGTATAGTTTGTTCTTATAAAATAAGGT
ACGTGTAGCCACTTAAGACTGATGATGACAAGCCATAGATGTTTGAGCTT
TAGTTTTTCATCTACTCCTACTTGTCTCAGCACACTGATTGGTATATTTG
GTTATGTCTGATAATGTCTTAACCTAGTGTTTTTTTGGAAATAAGAAGAG
TTCTGATATTGGCTTTTTCAGTATAACTTAATGTTGATTACTAATCACCT
AATGTGAAATTTTGATTTTTAGGTGCTGCCGAAAAACCACAAGTGAAACA
ATTTGAGAAAGTGTCACAACAGAGGATTGAAGAAGCAAAGCGAAAGGATG
ACAAAGATGAAGAGAAGACAAAAAATCAAACTGATTTTGATGTTGATGAT
GACGAGGAAGTTATTGGTCCATTGCCTCCTGGTTTTGGTCAAAGTGGTAA
TGAAGAAAAGAGTAAGGAGCCAAAAGAAAAAGGAAGTGAAGAAGCAAAAC
AAAAGAAAGACAGTGATGAGGAAAGTGAAGATGATGAAGAAGAGAATATC
ATTCAGAAAATCCCACGATCACATGAAATCACTCTTAAGCATGGTACCAA
AGTCATATCTGCCCTTGCGCTAGATCCTTCTGGATCTCGACTCGCCTCCG
GTGGATATAATTATGACGTCAAATTTTGGGATTTCAACAGCATGGATATT
AATTTGCGTGCTTTTCGTACGATAGAGCCATTCGAGAGTCATTGGATTCA
CAGTTTGAAGTATAGCATAACTGGTGATATGCTTTTGATAGGTGCTGGTA
ATGCTCAACCCAAGGTTCTTGATCGTGATGGACACCAAGTATATGAATGT
AAAAAAGGTGACCAGTATATTGTGGATATGAGGAACACCAAAGGACACAT
ATCCATGGTGCGAAATTGTTGCTGGGATCCTAAAGATCGGAACATGTTTA
TTTCATCTGGCGATGATGGTACTGTTAGGTTGTGGGATATAAACACTGTA
CGTAAAAATAAGGAAGTTATCGTTGTTAAGGACATGCAGAGGAGAAAAAC
TGGTTGTACGTATTGTACTTTTAACCATGATGGAAAGTTGATTTTAGCTG
CTGGCCAAGATGGCTCCATACAGGGTTGGGATACTAAGAAAATGTTTGTT
AATACAAGTATCAAGATCCCGAACGCTCATACCAAAGGTAGTGAGACGTC
TTGTCTTACTCTTGCTCATGATAATCGAACATTGATTTCAAGGGGTGGAG
ATGATACTGTCAAACAATGGGATTTGAGAAATGTCAAGAAACCAGTCGCT
ACTATGGATGGATTGACTACGTATTATTCAACCACGATGTGCTCTTTTAG
TCCAGATGAGAAACTTCTATTAACAGGAACATCTACTAAGAAAGAGGGTG
AAGGAAGTCTCCTTTTCTTGGAGAGAGACACATTTGAGACGGTGTATCAA
GTGAAATTTGGTAAAGGTGTATCAGTGGTAACCTCGCTATGGCATCCGAA
ATTGAACCAGATTGTTGTTGGTTTGTCGGACGGTAATGTTAGAGTCTTGT
TTGACCCAACTAAGAGTCGAAACGGTGCGACGTTGTGTGTTGGGAAAGTT
AAACACAAACGAGTTGATCTTGGTGAAGAAATGATTAAGCCACAAATTGT
TAACCCACATTCCCTACGCATGTACCGTGAGAAGAAGATAGACTCTGTGA
AGAAGATGAAAGCCAAAATGCGTAAAGATCCGATCACGTCACATAAACCT
GAAGCTCCAATGGGCACCGGTCATGGAGCTGGTGGTCGCCTTAAAGAAGG
AATGAGTTTAACAGGATTTGTTGTTAAAAACATTGCGTTAGCTAAGAAAG
ACGATCTTAACCCTAGAGAAGCTTTATTGAGACACGCGAAGGAGGCAGAG
AAAAATCCCTTTTGGATTTCACCAGCATACGCGAGCACTCAACCGAAGAA
GATTTTTAAGGAAGAATCAAGCGAAGAAGAAGAGGAAGATGATATGGGAC
CTCTTGGGAAGCGACAGAAAACTCAGTAA Coding sequence (CDS) from alignment at sc0000134_pilon:478078..480406- >XLOC_038376 ID=XLOC_038376|Name=XLOC_038376|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3618bp|location=Sequence derived from alignment at sc0000134_pilon:478078..480406- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTGAAGAAGAGATGATGAGACAGATGATGGGTTTCAGTGGCTT
TGATGGCATCTGAAGAAGAGATGATGAGACAGATGATGGGTTTCAGTGGC
TTTGGTGCTGCCGAAAAACCACAAGTGAAACAATTTGAGAAAGTGTCACA
ACAGAGGATTGAAGAAGCAAAGCGAAAGGATGACAAAGATGAAGAGAAGA
CAAAAAATCAAACTGATTTTGATGTTGATGATGACGAGGAAGTTATTGGT
CCATTGCCTCCTGGTTTTGGTCAAAGTGGTAATGAAGAAAAGAGTAAGGA
GCCAAAAGAAAAAGGAAGTGAAGAAGCAAAACAAAAGAAAGACAGTGATG
AGGAAAGTGAAGATGATGAAGAAGAGAATATCATTCAGAAAATCCCACGA
TCACATGAAATCACTCTTAAGCATGGTACCAAAGTCATATCTGCCCTTGC
GCTAGATCCTTCTGGATCTCGACTCGCCTCCGGTGGATATAATTATGACG
TCAAATTTTGGGATTTCAACAGCATGGATATTAATTTGCGTGCTTTTCGT
ACGATAGAGCCATTCGAGAGTCATTGGATTCACAGTTTGAAGTATAGCAT
AACTGGTGATATGCTTTTGATAGGTGCTGGTAATGCTCAACCCAAGGTTC
TTGATCGTGATGGACACCAAGTATATGAATGTAAAAAAGGTGACCAGTAT
ATTGTGGATATGAGGAACACCAAAGGACACATATCCATGGTGCGAAATTG
TTGCTGGGATCCTAAAGATCGGAACATGTTTATTTCATCTGGCGATGATG
GTACTGTTAGGTTGTGGGATATAAACACTGTACGTAAAAATAAGGAAGTT
ATCGTTGTTAAGGACATGCAGAGGAGAAAAACTGGTTGTACGTATTGTAC
TTTTAACCATGATGGAAAGTTGATTTTAGCTGCTGGCCAAGATGGCTCCA
TACAGGGTTGGGATACTAAGAAAATGTTTGTTAATACAAGTATCAAGATC
CCGAACGCTCATACCAAAGGTAGTGAGACGTCTTGTCTTACTCTTGCTCA
TGATAATCGAACATTGATTTCAAGGGGTGGAGATGATACTGTCAAACAAT
GGGATTTGAGAAATGTCAAGAAACCAGTCGCTACTATGGATGGATTGACT
ACGTATTATTCAACCACGATGTGCTCTTTTAGTCCAGATGAGAAACTTCT
ATTAACAGGAACATCTACTAAGAAAGAGGGTGAAGGAAGTCTCCTTTTCT
TGGAGAGAGACACATTTGAGACGGTGTATCAAGTGAAATTTGGTAAAGGT
GTATCAGTGGTAACCTCGCTATGGCATCCGAAATTGAACCAGATTGTTGT
TGGTTTGTCGGACGGTAATGTTAGAGTCTTGTTTGACCCAACTAAGAGTC
GAAACGGTGCGACGTTGTGTGTTGGGAAAGTTAAACACAAACGAGTTGAT
CTTGGTGAAGAAATGATTAAGCCACAAATTGTTAACCCACATTCCCTACG
CATGTACCGTGAGAAGAAGATAGACTCTGTGAAGAAGATGAAAGCCAAAA
TGCGTAAAGATCCGATCACGTCACATAAACCTGAAGCTCCAATGGGCACC
GGTCATGGAGCTGGTGGTCGCCTTAAAGAAGGAATGAGTTTAACAGGATT
TGTTGTTAAAAACATTGCGTTAGCTAAGAAAGACGATCTTAACCCTAGAG
AAGCTTTATTGAGACACGCGAAGGAGGCAGAGAAAAATCCCTTTTGGATT
TCACCAGCATACGCGAGCACTCAACCGAAGAAGATTTTTAAGGAAGAATC
AAGCGAAGAAGAAGAGGAAGATGATATGGGACCTCTTGGGAAGCGACAGA
AAACTCAGTAAGTGCTGCCGAAAAACCACAAGTGAAACAATTTGAGAAAG
TGTCACAACAGAGGATTGAAGAAGCAAAGCGAAAGGATGACAAAGATGAA
GAGAAGACAAAAAATCAAACTGATTTTGATGTTGATGATGACGAGGAAGT
TATTGGTCCATTGCCTCCTGGTTTTGGTCAAAGTGGTAATGAAGAAAAGA
GTAAGGAGCCAAAAGAAAAAGGAAGTGAAGAAGCAAAACAAAAGAAAGAC
AGTGATGAGGAAAGTGAAGATGATGAAGAAGAGAATATCATTCAGAAAAT
CCCACGATCACATGAAATCACTCTTAAGCATGGTACCAAAGTCATATCTG
CCCTTGCGCTAGATCCTTCTGGATCTCGACTCGCCTCCGGTGGATATAAT
TATGACGTCAAATTTTGGGATTTCAACAGCATGGATATTAATTTGCGTGC
TTTTCGTACGATAGAGCCATTCGAGAGTCATTGGATTCACAGTTTGAAGT
ATAGCATAACTGGTGATATGCTTTTGATAGGTGCTGGTAATGCTCAACCC
AAGGTTCTTGATCGTGATGGACACCAAGTATATGAATGTAAAAAAGGTGA
CCAGTATATTGTGGATATGAGGAACACCAAAGGACACATATCCATGGTGC
GAAATTGTTGCTGGGATCCTAAAGATCGGAACATGTTTATTTCATCTGGC
GATGATGGTACTGTTAGGTTGTGGGATATAAACACTGTACGTAAAAATAA
GGAAGTTATCGTTGTTAAGGACATGCAGAGGAGAAAAACTGGTTGTACGT
ATTGTACTTTTAACCATGATGGAAAGTTGATTTTAGCTGCTGGCCAAGAT
GGCTCCATACAGGGTTGGGATACTAAGAAAATGTTTGTTAATACAAGTAT
CAAGATCCCGAACGCTCATACCAAAGGTAGTGAGACGTCTTGTCTTACTC
TTGCTCATGATAATCGAACATTGATTTCAAGGGGTGGAGATGATACTGTC
AAACAATGGGATTTGAGAAATGTCAAGAAACCAGTCGCTACTATGGATGG
ATTGACTACGTATTATTCAACCACGATGTGCTCTTTTAGTCCAGATGAGA
AACTTCTATTAACAGGAACATCTACTAAGAAAGAGGGTGAAGGAAGTCTC
CTTTTCTTGGAGAGAGACACATTTGAGACGGTGTATCAAGTGAAATTTGG
TAAAGGTGTATCAGTGGTAACCTCGCTATGGCATCCGAAATTGAACCAGA
TTGTTGTTGGTTTGTCGGACGGTAATGTTAGAGTCTTGTTTGACCCAACT
AAGAGTCGAAACGGTGCGACGTTGTGTGTTGGGAAAGTTAAACACAAACG
AGTTGATCTTGGTGAAGAAATGATTAAGCCACAAATTGTTAACCCACATT
CCCTACGCATGTACCGTGAGAAGAAGATAGACTCTGTGAAGAAGATGAAA
GCCAAAATGCGTAAAGATCCGATCACGTCACATAAACCTGAAGCTCCAAT
GGGCACCGGTCATGGAGCTGGTGGTCGCCTTAAAGAAGGAATGAGTTTAA
CAGGATTTGTTGTTAAAAACATTGCGTTAGCTAAGAAAGACGATCTTAAC
CCTAGAGAAGCTTTATTGAGACACGCGAAGGAGGCAGAGAAAAATCCCTT
TTGGATTTCACCAGCATACGCGAGCACTCAACCGAAGAAGATTTTTAAGG
AAGAATCAAGCGAAGAAGAAGAGGAAGATGATATGGGACCTCTTGGGAAG
CGACAGAAAACTCAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000134_pilon | genome | sc0000134_pilon:478078..480406 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 55-1809:1756 |
| Aaloc | 1-51:2330 |
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