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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000134_pilon:262299..267187- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038368 ID=XLOC_038368|Name=XLOC_038368|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4889bp|location=Sequence derived from alignment at sc0000134_pilon:262299..267187- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGCCACCTGGACGACTGTATTTCATTACATTATTTCTGCTTCTGAA
TGGTAATATCAAAATTTCATTTTCCTTTTATAACAACTCGATGTCACCTC
TTAATGCTACGTAGCTGAGTACACTCCTTTTTTATAAGAACAACGAGGCA
AAAAGTCGCCAAAAATGAGACCAATTTAAGAACAATGCTGAGCCTGGATT
TACTCAATTTCAAGCAATTAAGGGCTCAAAGTAGTAAAAATTTGATATAA
TGCCCAAAATACCTGTATTTTACCCCGCAAATAAGAACAGGAAAGCGACA
AAAAAATAGAACAGCAAAGCCTCATTGAAAATCTACTGACTCTTATAAAA
AAGACTGTATAACATAAAATTTCCTGGTACAAAAGAAACATCGTGAAGAC
CTGCCATAATCTATTCTATTGACAAGATTTTCAAAAACTAGCAAATATGT
CTTTTAACTACTACCGTCGTTTTGGGTAAGATTTTGCTTCCCGGACCTTA
GATTCCACTGCCACTTTCCAATGGAAAAGAAAAAAATCCCAGCTGGTTGG
AAAATAAACTCCCGAAAGTTACCCGGATTGACTATATGCCGTGCATCTGG
AAAAAGATTTTACAATTTCCAGCCAGTCCCCCTGTGGGAAAACAGCGGAA
ATATCCCCAAAAGTTAGTGAAATATTATTATATATCCGGGAAGTGGGAGC
TTAAACAAAACGACCGTAGCTTTCGCCAAACTTAATCCACAAAATAAATA
AGTGATTCCGAAATTACGTAATAAAGAGAATCCTTTGTTTACTTTTTTAG
GATGCTTTGCCTCATCCGCCCATCCTACAAGGAAGAATGCAACCAAAATA
TTGGAAAAGATGGCCGATAAGAAAGGCACAATTCGTATTGCTGGTAAAAT
TTGATTCCTCAATTATTACCAGTGGAAACTCCCTACCCAATAGGGAACTT
ATTATCAATTGAATGAAAAGTGAAGTTCAAGTTTTCGAACAGGATTGATG
ATTTTTGCGTTGCGGTCTATTTTTGGTGTGTGTTAAGCAGATGAGATGGA
GTTTTTATAAGATACTTTAATAATTGGTCATTTGAAGTAATAAAAATGGC
TGCGTTTAGACCAGCCTGACATTTGTAATTGCCTGCAGTATTCTTTTGAA
TTCTATTGTTCCACGCAATTGTTCGGTTTGTCTAATGCCTAATGATGCCA
GCGTGTTGGCATTTCGTTGGCATTTGAAATGCCATTTGAGCAAAGGAATC
CCCTTTTCTGGCATTTCAAATCAAACAAAGGAACCAAAAAAAAGAGAAAA
AATAACATTTTTGATTTTTTAAAGCATTTGCACGTTTTTTATTCAGTTCT
TCCTATAGATTGTAAAATTTGCAAGATTTGCCATAGCCTAGCCCTACGGC
AAAAATTTTCATTATTAATGACTGCAGTTTTTGAGAAATTCCATGCTTTT
CATTGTCTGATCTGTCAAAGTTGAACTTGAGGGAATCACAAGGGAATAAA
TGATCTGTAGTGAGATTGGGCTATTCCAGAAAAGATTTATACCCCCTATG
TTGAGGAGGTCTTTTTTAGGAAACTTGACTTTTCTTCAATTTTTTGGACC
CCTGGTGTATTCGACCTCATTTTACTGACCAACCTGGATTTTCAACCTCG
TTTTACTGACCACCCTGCATTTTCACCTCAATTTACAGTCCACCCTGGAT
TTTTGAATCCGAAAAACGGGAACCCCTGGGTTTTTCTTTTTCAAGACTAC
TCTGGACGTCACACCTCCTTGACAGGGGAAACATTATGTCTGAAATAGCA
AAATAGCACATGAAGTGTTTCAGAACCTTGTTTGTTTCTCTTTAATAGGT
CCATGGAATTCCGATAGCGCACTAGATCGTAATGTGGACATGGGTGAGGA
TGCTTATGTGAAGAAAATCATCTCAAGTAATGAAGGAATCAACTTCAATA
AAGACATGGCTGAAGCTGGAGGTAATTGGAAAGTTCAAGTTAATTAAAGA
GTATAAACTTTCACCGGTAGTTCCACGACTCTGGGAACCACCTTCATACA
CAGTTTTGATGAATTCATTCAAGAAAAGCTTTTAAACCATTTTTCATTCG
GAAATTTTCACTCTCATCCATTGATTCACGAAAGTTCATGCTGGCGAAAA
TATTTTTTGTGCTCTTATTCGTGAAAGCTTATGTCGTAAAACCTTGCGAT
GTTTTAGGGTTCATCATTTTATATTTGGATACCTATCTATGATGTCTAAC
TCTCCATGTCTAACAACCGCTCAGTGAGAATGATGAAGGAGCTTTAAAAA
CCGGGACCTTCTATCAGTGACCCGGTTTGAAAAATAAAGAAGAAAAAATG
AACTTTTTATGATTTATTGACATAGTTACTTTGAAACCTCCTTCTAATTT
CAGCACAGATATGTAATAGTTATCAGACAGTTGCGAGTACAATATGAGAA
ATATTTTACGAGTTCCGAGATTTTTCCGTACAATATTTTCCGAGCCTTTA
GGCGAGGAAAATATACGGAAAATCGAGAACGAGTGAAATATTTCCATATT
GTACGAGCAAATGTCTGATAACTAGTTTATCGGTGAGCCAAAAAATGCAC
TTTCTGTGTTGGAGGACACTTTTGTAGCAAAGTGACGTTAGATTGCTTCT
ACCGCTACAATGCAACAACATCTTTTCGTCAATTTATATTTTTACATGTA
AAATACAAGATATATTGTACTCTTTTTAACCAATCAGATTGCAGATATTT
TTTGGATCGCCGATAAATGATATTATTCTCCACATAGATTCATTGCACAT
AAAGATATTTAGTAAAACTTAAATGTAGCTTTTACCCATACTCATGAAAT
CATGAAACTACCTATTTCGTGTTCTTTCAATCACACAACTCGTAATAATT
ATTTATACTCTATTTCTAGAAATGTTTGAGGTAAACGGCATCGATGATTT
CTACGACAAAAACGCCATGATAACGTACGAAATCAATGGCCACGAAATTC
CTGTTCATATGAAACCTCACTTGACGCCTCAAACTAAATCCCTGTTCCCA
GAGTACGTCAAAGACTCACCTGGTCAAATGCAAACAGGTGGATTCGTTCG
AGGATCTAAAGCAGGAGGAATGCTCCATGGATACGCTAAAAAGGTTGCTG
GTGTTAAACTGCCAGCTGGACTATCACTAAATGATATGCCTGAATATAAA
ATGCAGCGATTCACAGGGAAAACGCTGGAGAATTCAAATATGTGGAAATC
TTTAGAAGGTTTGAAACAAGATAAGGATAATGGAGATTTGAGATATGCTT
ATAAACAGAATCACGCTATTACGAATCTTTTTCAGAAGCAATTACCAGCC
TTGGCTGCTTTCCAGAAACACTATAATCACCAGAGTCGATATACAAAGCC
TGCATTCGGTGATCAGATCTTAAAACATCATGTACCAAGACATCACAGGC
TAGGGAAACCACTATTACGGGAATTTATGAATCAGTATCCTCATGAGTCG
ACCAAAGCTGACGAAACGATTGAACACAAACCAGCTCTGGTGCAGGAATT
CATGAGTATGAAACCCAATGAGGAGTTCGAAAAGGAAGAAAACGAAAAAG
CTAGTGGTAAATCAGAACGCAATGAATATCGGTTTGCGGCCAGAAAAACA
AACGGAGAACACCAAGAACAAATCCGTCATGAAGATTCCATTGAAAATAA
ACATTTTACACAAGAGAAAAATGCACAACAAGAAAAAGCAACAAGTTTGT
TCCAAAACCTTGATTCTCTTCATCAAAAACTTCAATTAGATAAACAAATC
AATGCTGCTGAACTACAAAGTAAATCTGCAAGTCAAGACCCGCATAAAGC
TGAAGCCAAGACAAGGATTTTAAACCTTCTCGGTGAACTAACGGAAAAAC
TTAAAGGAATGGAAAGTATAGTCACTCGACATCGTGATAAAGAAATAGAA
GCTAAATTCATTAAAGAACAGACCTCAACAAACCAGGAGAATAAATTTGA
GGACACTGAGAAAAGTAGACTACCTGAAGATCACTCACCTTCTCAATCAG
ATTCTGATGTTGATACTATGAATCGTATTGAAGCACAGTTAAAAGAGAAA
GTTTCTAATCTACAAGAAGGTATACAAAATGCTAACTCTAGAAGTTATCC
TAATGAAGGACCTGAGGAAGAGAGTAAGCATGAGAAGTTCTTTATGAATA
GCTTCCGAAAGATTGGAAACTCTGAACAAGTAGGATCTGAATTTGATAGC
CATAGGATTGAGTCACAAGCTAAATACCATTCGAATCAAGCTATTGAAGG
ATTCAGACAACCTGATACCAATCAACCAATCATTATGGATACTAAAGCTA
TCGATTTCAATCCCGCCGATGGTGCTTCTATGGAAAATGACGATAGTGAT
CAGGTCAATAGCGTGAACTCAGATGGTGAGGAGCAAGTCGTTGAGGAGCC
GAGCCAACGAAAGTTCGTCGGTAGAGACGACGAGGACGACGAAGATGAAA
CGAGTGACGAGGATCCCCATAAAGGGAAACTATCGGCGCCTGTGCGAAAA
CACTGGAAGAAACCCGAGGTTGATGAAGATTTTGTACCAACGAGACAAAC
TCTTATGAAATATCATCAAGGCCGTCATCACAATGCTCCATCTTCAGAAG
AAGATGATACTGAGCAACAATATGATGTCGGTGAAGAAAAGAAATTATCA
CGGCGACATAAACCACATCATAAGAAAATCGAAGAAAAAGATGACGGCGA
TAATGAACTTTTGAATCATTCTTTTATTGATGATGATGAGCAATTGACCA
ATAAGAGGCATCATAAAAAGTCACGTGATCACGAGGAAGCCGAGAGTAAC
GAAAATGATGAAGAAGAGATCACAAATTCCCATCACCAC Coding sequence (CDS) from alignment at sc0000134_pilon:262299..267187- >XLOC_038368 ID=XLOC_038368|Name=XLOC_038368|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4476bp|location=Sequence derived from alignment at sc0000134_pilon:262299..267187- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGCCACCTGGACGACTGTATTTCATTACATTATTTCTGCTTCTGAA
TGATGATGCCACCTGGACGACTGTATTTCATTACATTATTTCTGCTTCTG
AATGGATGCTTTGCCTCATCCGCCCATCCTACAAGGAAGAATGCAACCAA
AATATTGGAAAAGATGGCCGATAAGAAAGGCACAATTCGTATTGCTGGAT
GCTTTGCCTCATCCGCCCATCCTACAAGGAAGAATGCAACCAAAATATTG
GAAAAGATGGCCGATAAGAAAGGCACAATTCGTATTGCTGGTCCATGGAA
TTCCGATAGCGCACTAGATCGTAATGTGGACATGGGTGAGGATGCTTATG
TGAAGAAAATCATCTCAAGTAATGAAGGAATCAACTTCAATAAAGACATG
GCTGAAGCTGGAGGTCCATGGAATTCCGATAGCGCACTAGATCGTAATGT
GGACATGGGTGAGGATGCTTATGTGAAGAAAATCATCTCAAGTAATGAAG
GAATCAACTTCAATAAAGACATGGCTGAAGCTGGAGAAATGTTTGAGGTA
AACGGCATCGATGATTTCTACGACAAAAACGCCATGATAACGTACGAAAT
CAATGGCCACGAAATTCCTGTTCATATGAAACCTCACTTGACGCCTCAAA
CTAAATCCCTGTTCCCAGAGTACGTCAAAGACTCACCTGGTCAAATGCAA
ACAGGTGGATTCGTTCGAGGATCTAAAGCAGGAGGAATGCTCCATGGATA
CGCTAAAAAGGTTGCTGGTGTTAAACTGCCAGCTGGACTATCACTAAATG
ATATGCCTGAATATAAAATGCAGCGATTCACAGGGAAAACGCTGGAGAAT
TCAAATATGTGGAAATCTTTAGAAGGTTTGAAACAAGATAAGGATAATGG
AGATTTGAGATATGCTTATAAACAGAATCACGCTATTACGAATCTTTTTC
AGAAGCAATTACCAGCCTTGGCTGCTTTCCAGAAACACTATAATCACCAG
AGTCGATATACAAAGCCTGCATTCGGTGATCAGATCTTAAAACATCATGT
ACCAAGACATCACAGGCTAGGGAAACCACTATTACGGGAATTTATGAATC
AGTATCCTCATGAGTCGACCAAAGCTGACGAAACGATTGAACACAAACCA
GCTCTGGTGCAGGAATTCATGAGTATGAAACCCAATGAGGAGTTCGAAAA
GGAAGAAAACGAAAAAGCTAGTGGTAAATCAGAACGCAATGAATATCGGT
TTGCGGCCAGAAAAACAAACGGAGAACACCAAGAACAAATCCGTCATGAA
GATTCCATTGAAAATAAACATTTTACACAAGAGAAAAATGCACAACAAGA
AAAAGCAACAAGTTTGTTCCAAAACCTTGATTCTCTTCATCAAAAACTTC
AATTAGATAAACAAATCAATGCTGCTGAACTACAAAGTAAATCTGCAAGT
CAAGACCCGCATAAAGCTGAAGCCAAGACAAGGATTTTAAACCTTCTCGG
TGAACTAACGGAAAAACTTAAAGGAATGGAAAGTATAGTCACTCGACATC
GTGATAAAGAAATAGAAGCTAAATTCATTAAAGAACAGACCTCAACAAAC
CAGGAGAATAAATTTGAGGACACTGAGAAAAGTAGACTACCTGAAGATCA
CTCACCTTCTCAATCAGATTCTGATGTTGATACTATGAATCGTATTGAAG
CACAGTTAAAAGAGAAAGTTTCTAATCTACAAGAAGGTATACAAAATGCT
AACTCTAGAAGTTATCCTAATGAAGGACCTGAGGAAGAGAGTAAGCATGA
GAAGTTCTTTATGAATAGCTTCCGAAAGATTGGAAACTCTGAACAAGTAG
GATCTGAATTTGATAGCCATAGGATTGAGTCACAAGCTAAATACCATTCG
AATCAAGCTATTGAAGGATTCAGACAACCTGATACCAATCAACCAATCAT
TATGGATACTAAAGCTATCGATTTCAATCCCGCCGATGGTGCTTCTATGG
AAAATGACGATAGTGATCAGGTCAATAGCGTGAACTCAGATGGTGAGGAG
CAAGTCGTTGAGGAGCCGAGCCAACGAAAGTTCGTCGGTAGAGACGACGA
GGACGACGAAGATGAAACGAGTGACGAGGATCCCCATAAAGGGAAACTAT
CGGCGCCTGTGCGAAAACACTGGAAGAAACCCGAGGTTGATGAAGATTTT
GTACCAACGAGACAAACTCTTATGAAATATCATCAAGGCCGTCATCACAA
TGCTCCATCTTCAGAAGAAGATGATACTGAGCAACAATATGATGTCGGTG
AAGAAAAGAAATTATCACGGCGACATAAACCACATCATAAGAAAATCGAA
GAAAAAGATGACGGCGATAATGAACTTTTGAATCATTCTTTTATTGATGA
TGATGAGCAATTGACCAATAAGAGGCATCATAAAAAGTCACGTGATCACG
AGGAAGCCGAGAGTAACGAAAATGATGAAGAAGAGATCACAAATTCCCAT
CACCACAAATGTTTGAGGTAAACGGCATCGATGATTTCTACGACAAAAAC
GCCATGATAACGTACGAAATCAATGGCCACGAAATTCCTGTTCATATGAA
ACCTCACTTGACGCCTCAAACTAAATCCCTGTTCCCAGAGTACGTCAAAG
ACTCACCTGGTCAAATGCAAACAGGTGGATTCGTTCGAGGATCTAAAGCA
GGAGGAATGCTCCATGGATACGCTAAAAAGGTTGCTGGTGTTAAACTGCC
AGCTGGACTATCACTAAATGATATGCCTGAATATAAAATGCAGCGATTCA
CAGGGAAAACGCTGGAGAATTCAAATATGTGGAAATCTTTAGAAGGTTTG
AAACAAGATAAGGATAATGGAGATTTGAGATATGCTTATAAACAGAATCA
CGCTATTACGAATCTTTTTCAGAAGCAATTACCAGCCTTGGCTGCTTTCC
AGAAACACTATAATCACCAGAGTCGATATACAAAGCCTGCATTCGGTGAT
CAGATCTTAAAACATCATGTACCAAGACATCACAGGCTAGGGAAACCACT
ATTACGGGAATTTATGAATCAGTATCCTCATGAGTCGACCAAAGCTGACG
AAACGATTGAACACAAACCAGCTCTGGTGCAGGAATTCATGAGTATGAAA
CCCAATGAGGAGTTCGAAAAGGAAGAAAACGAAAAAGCTAGTGGTAAATC
AGAACGCAATGAATATCGGTTTGCGGCCAGAAAAACAAACGGAGAACACC
AAGAACAAATCCGTCATGAAGATTCCATTGAAAATAAACATTTTACACAA
GAGAAAAATGCACAACAAGAAAAAGCAACAAGTTTGTTCCAAAACCTTGA
TTCTCTTCATCAAAAACTTCAATTAGATAAACAAATCAATGCTGCTGAAC
TACAAAGTAAATCTGCAAGTCAAGACCCGCATAAAGCTGAAGCCAAGACA
AGGATTTTAAACCTTCTCGGTGAACTAACGGAAAAACTTAAAGGAATGGA
AAGTATAGTCACTCGACATCGTGATAAAGAAATAGAAGCTAAATTCATTA
AAGAACAGACCTCAACAAACCAGGAGAATAAATTTGAGGACACTGAGAAA
AGTAGACTACCTGAAGATCACTCACCTTCTCAATCAGATTCTGATGTTGA
TACTATGAATCGTATTGAAGCACAGTTAAAAGAGAAAGTTTCTAATCTAC
AAGAAGGTATACAAAATGCTAACTCTAGAAGTTATCCTAATGAAGGACCT
GAGGAAGAGAGTAAGCATGAGAAGTTCTTTATGAATAGCTTCCGAAAGAT
TGGAAACTCTGAACAAGTAGGATCTGAATTTGATAGCCATAGGATTGAGT
CACAAGCTAAATACCATTCGAATCAAGCTATTGAAGGATTCAGACAACCT
GATACCAATCAACCAATCATTATGGATACTAAAGCTATCGATTTCAATCC
CGCCGATGGTGCTTCTATGGAAAATGACGATAGTGATCAGGTCAATAGCG
TGAACTCAGATGGTGAGGAGCAAGTCGTTGAGGAGCCGAGCCAACGAAAG
TTCGTCGGTAGAGACGACGAGGACGACGAAGATGAAACGAGTGACGAGGA
TCCCCATAAAGGGAAACTATCGGCGCCTGTGCGAAAACACTGGAAGAAAC
CCGAGGTTGATGAAGATTTTGTACCAACGAGACAAACTCTTATGAAATAT
CATCAAGGCCGTCATCACAATGCTCCATCTTCAGAAGAAGATGATACTGA
GCAACAATATGATGTCGGTGAAGAAAAGAAATTATCACGGCGACATAAAC
CACATCATAAGAAAATCGAAGAAAAAGATGACGGCGATAATGAACTTTTG
AATCATTCTTTTATTGATGATGATGAGCAATTGACCAATAAGAGGCATCA
TAAAAAGTCACGTGATCACGAGGAAGCCGAGAGTAACGAAAATGATGAAG
AAGAGATCACAAATTCCCATCACCAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000134_pilon | genome | sc0000134_pilon:262299..267187 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 271-2238:1969 |
| Aaloc | 148-267:3040 |
| Aaloc | 55-144:4088 |
| Aaloc | 1-51:4890 |
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