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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000266_pilon:30378..32244- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038362 ID=XLOC_038362|Name=XLOC_038362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1867bp|location=Sequence derived from alignment at sc0000266_pilon:30378..32244- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGCTTTGTTTTTATCGGCAACTCTATCCTCGATTGTGATTGGTCG
ATATATGGATCATTATCGTAATCTTCGGAGCACGGCTCTGGCGATGGCTT
GGTTTAACATTGCTGGTAATTTAATATATTTGATACCGGTTTTAAACTGG
TTCCCAATCTTTGGTCGATTTTTATGTGGAATAGCAGATGGAATCAAACC
AGCTTATCAAGGTTAGTCAAAAACCAAACTCGCACTCAGGCCTTTTGTTC
GCCTTTTATGATGCTCATAGTGCCACAGATTTATAAACCCCGAAGTGCTA
GATGTCGTACTTTAAGCTCTTCCAAGTAAAAAAAAGTGAATATCGCAAAG
AATATTGCTGCTATTGTTTTTGAAAGCCCAAGGAGCATCTAACTGGTCAA
GCACTGAACTTCTATTGTAATGTCACGTGACCTAGGTATAGAATTTCCTA
CCTAACCTTGGCATATATAACATTTTTTGAAAATTAACCCCCCTCGGACA
TTGTGACTTTTGACCTCCTGGACAGCAGGTCCCCGGACAAGCATGACACT
AAAAATACCCTCAAACAGAGCAAGTTTACCCCCCGGACAAGGCAAATTTT
GTTGATTTTTCACAATGCGCCCGAACACTATATCCACCACCCCCCCCCCC
CCATGTACAGACATTTTTTGGAAGAGTCCAAAAGAAAGATGTTTAAAAAC
ATGATTTAATTTACAATCATTCTATTTTTAGGAGAATTAACTCGAACATA
CCCTTCTAAAGAACTTTCTGTACTGGTCACAAAGATACAAACATTAACCA
TCATTTGCCACGCCTTAGCCCCTGTGTCACCTATCATATTCAAATGGGTC
AACTTCAAATTATTTGGGCATGAAATCAATCAATACAACTGTGTTGCTCT
GTTTCTGGCTGGGTGCACACTAACATACGGGGTCGCCGCTTACTTCTTGT
TAACTGATTTGACTAAAAACCCTGGTTATCACGTTTACTTAAAAGTCAAT
CAAGAACTCAGTGTAGGATCAAGAAAATCAGTATCTATATGTCAATTTAG
CGGTGACAATATGAAAAACACTGATATATCAAACGAAGAAGTTTCAAAAG
AAAGTCTATATTCGTCTAACAAACCAGAGGCAATAGCAAAGAAGGACCAT
AGTTTATATCCGTTTACAGAATCGGAGATAATTGGAAAGTATGACCAAGC
AGAACTTCTACCAGTAGCTAATAAACCAGAAATTGTTGATCTCAATCCGA
AACCGTTAACACTAACAGAGCTATTGAAAAATGTGGACGTTCTAGTTCCA
CTGTATGTAATATTTTTAATCAATATTGTTTATGCTCAATCTGAGTTAGT
GATTAACATTGTAGCTGTTAATCTATTCCATTGGAGCATCCAACATCTGA
GTATTTTGACCATAACAGTAGTTATCATTGCAGTATTAACATTGAAATAT
ATCGAAAGATTCAACACGTACATTGATGCGTATTACATGCTTGTGTTATG
TACGACTGGAAACGCACTTAATCTGACAATTATTCTTCCTTTAGCTAAGG
AGTGTATTGGAAATGACGCTTTGAGGAACGTTGCAATATTTATGACACAG
TGTTTTAATATCCTGTTTAGCTATCCTGCAACTGCTTTTACAACTGTCAT
TCTCTCTGTAGTGGTAGACCATCATTCAAGATGTTCTGTGTTAGGACTGC
GACAAATGGCAATGAAATTGGCGTGTTTTTTTGGATATTTTTCTGCTGCT
TTCTTGTTCATTGTTATCGATAAAGCGTATATCATTTTGACATTATTTTG
CTTGTCAACCTCATTGGTTATGTTAATTAGGAGTCTATCTTTTATTTTAA
AGTATAAAGAGTTATAA Coding sequence (CDS) from alignment at sc0000266_pilon:30378..32244- >XLOC_038362 ID=XLOC_038362|Name=XLOC_038362|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2694bp|location=Sequence derived from alignment at sc0000266_pilon:30378..32244- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGCTTTGTTTTTATCGGCAACTCTATCCTCGATTGTGATTGGTCG
ATATATGGATCATTATCGTAATCTTCGGAGCACGGCTCTGGCGATGGCTT
GGTTTAACATTGCTGGTAATTTAATATATTTGATACCGGTTTTAAACTGG
TTCCCAATCTTTGGTCGATTTTTATGTGGAATAGCAGATGGAATCAAACC
AGCTTATCAAGATGGGTGCTTTGTTTTTATCGGCAACTCTATCCTCGATT
GTGATTGGTCGATATATGGATCATTATCGTAATCTTCGGAGCACGGCTCT
GGCGATGGCTTGGTTTAACATTGCTGGTAATTTAATATATTTGATACCGG
TTTTAAACTGGTTCCCAATCTTTGGTCGATTTTTATGTGGAATAGCAGAT
GGAATCAAACCAGCTTATCAAGGAGAATTAACTCGAACATACCCTTCTAA
AGAACTTTCTGTACTGGTCACAAAGATACAAACATTAACCATCATTTGCC
ACGCCTTAGCCCCTGTGTCACCTATCATATTCAAATGGGTCAACTTCAAA
TTATTTGGGCATGAAATCAATCAATACAACTGTGTTGCTCTGTTTCTGGC
TGGGTGCACACTAACATACGGGGTCGCCGCTTACTTCTTGTTAACTGATT
TGACTAAAAACCCTGGTTATCACGTTTACTTAAAAGTCAATCAAGAACTC
AGTGTAGGATCAAGAAAATCAGTATCTATATGTCAATTTAGCGGTGACAA
TATGAAAAACACTGATATATCAAACGAAGAAGTTTCAAAAGAAAGTCTAT
ATTCGTCTAACAAACCAGAGGCAATAGCAAAGAAGGACCATAGTTTATAT
CCGTTTACAGAATCGGAGATAATTGGAAAGTATGACCAAGCAGAACTTCT
ACCAGTAGCTAATAAACCAGAAATTGTTGATCTCAATCCGAAACCGTTAA
CACTAACAGAGCTATTGAAAAATGTGGACGTTCTAGTTCCACTGTATGTA
ATATTTTTAATCAATATTGTTTATGCTCAATCTGAGTTAGTGATTAACAT
TGTAGCTGTTAATCTATTCCATTGGAGCATCCAACATCTGAGTATTTTGA
CCATAACAGTAGTTATCATTGCAGTATTAACATTGAAATATATCGAAAGA
TTCAACACGTACATTGATGCGTATTACATGCTTGTGTTATGTACGACTGG
AAACGCACTTAATCTGACAATTATTCTTCCTTTAGCTAAGGAGTGTATTG
GAAATGACGCTTTGAGGAACGTTGCAATATTTATGACACAGTGTTTTAAT
ATCCTGTTTAGCTATCCTGCAACTGCTTTTACAACTGTCATTCTCTCTGT
AGTGGTAGACCATCATTCAAGATGTTCTGTGTTAGGACTGCGACAAATGG
CAATGAAATTGGCGTGTTTTTTTGGATATTTTTCTGCTGCTTTCTTGTTC
ATTGTTATCGATAAAGCGTATATCATTTTGACATTATTTTGCTTGTCAAC
CTCATTGGTTATGTTAATTAGGAGTCTATCTTTTATTTTAAAGTATAAAG
AGTTATAAGAGAATTAACTCGAACATACCCTTCTAAAGAACTTTCTGTAC
TGGTCACAAAGATACAAACATTAACCATCATTTGCCACGCCTTAGCCCCT
GTGTCACCTATCATATTCAAATGGGTCAACTTCAAATTATTTGGGCATGA
AATCAATCAATACAACTGTGTTGCTCTGTTTCTGGCTGGGTGCACACTAA
CATACGGGGTCGCCGCTTACTTCTTGTTAACTGATTTGACTAAAAACCCT
GGTTATCACGTTTACTTAAAAGTCAATCAAGAACTCAGTGTAGGATCAAG
AAAATCAGTATCTATATGTCAATTTAGCGGTGACAATATGAAAAACACTG
ATATATCAAACGAAGAAGTTTCAAAAGAAAGTCTATATTCGTCTAACAAA
CCAGAGGCAATAGCAAAGAAGGACCATAGTTTATATCCGTTTACAGAATC
GGAGATAATTGGAAAGTATGACCAAGCAGAACTTCTACCAGTAGCTAATA
AACCAGAAATTGTTGATCTCAATCCGAAACCGTTAACACTAACAGAGCTA
TTGAAAAATGTGGACGTTCTAGTTCCACTGTATGTAATATTTTTAATCAA
TATTGTTTATGCTCAATCTGAGTTAGTGATTAACATTGTAGCTGTTAATC
TATTCCATTGGAGCATCCAACATCTGAGTATTTTGACCATAACAGTAGTT
ATCATTGCAGTATTAACATTGAAATATATCGAAAGATTCAACACGTACAT
TGATGCGTATTACATGCTTGTGTTATGTACGACTGGAAACGCACTTAATC
TGACAATTATTCTTCCTTTAGCTAAGGAGTGTATTGGAAATGACGCTTTG
AGGAACGTTGCAATATTTATGACACAGTGTTTTAATATCCTGTTTAGCTA
TCCTGCAACTGCTTTTACAACTGTCATTCTCTCTGTAGTGGTAGACCATC
ATTCAAGATGTTCTGTGTTAGGACTGCGACAAATGGCAATGAAATTGGCG
TGTTTTTTTGGATATTTTTCTGCTGCTTTCTTGTTCATTGTTATCGATAA
AGCGTATATCATTTTGACATTATTTTGCTTGTCAACCTCATTGGTTATGT
TAATTAGGAGTCTATCTTTTATTTTAAAGTATAAAGAGTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000266_pilon | genome | sc0000266_pilon:30378..32244 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 214-1347:1135 |
| Aaloc | 1-210:1868 |
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