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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000013_pilon:1036665..1041120+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038348 ID=XLOC_038348|Name=XLOC_038348|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4456bp|location=Sequence derived from alignment at sc0000013_pilon:1036665..1041120+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAGATTTTCATGAAATGTGGAAATATTTGTTAACTTTTGGAATTCTGGC
AGCCGGTATCGAAAGATTGGAAGGTGCAAAGTATGTCATTCCTATGGGTA
TAGCTGTTTTAACCGATCTGATCTGACGGAGATAAATTGATAAAGGAGCT
AGGTCACTTCGAAAAAATCACCGTTATCATATTATTTGCACGCACAATTT
TTAGCCTGAATCGCAGAattctatagatatacttcctatatatgtctata
aaagaaacttttttcgctgaggatgagcagaagcctacgcAACTTTAGGC
TTATGAAtagattaaaaaagattttagccCGAAAATCTTTCTCTCGGGAA
AATACCTCTGGAAAATCCACTCTGTCTCTGAGCGGAATCCTCCACCCGGG
AACCCCAGAGCATTGTCTTGCATATGATACTTCTTAATCAGCTTTGGTTA
TTTACAATCCATTAGATCAAAGGTGCTTCGAATCAAACCAACGAATGAAG
AGCAAATTGATGTCCTCCTTGATTTGATCGATATATATCACGTAATATTT
TCTTTCCTTCTcagtttaagggctctgaccgtagtcaaaaaattgatttt
ggtatttgagcataaaagttatgtttcaggttcctttacacttttaacaa
agaattgcctttataaattgctttttgatcaaatccataaaagtaattaa
gaatttaattacaaaaatgacgttatgaactttaaaaagacgttaataat
atgttgcatcgccCTCTTTTATAAAacgtgctaagttttaatgggtaatt
aacctttttgtttcgaaattttttcaaactgtccgcaaagaattgaactg
ttttaaatttttcggaaaatttttctaaattgatgcatTGAAAGTAAttg
ctgtttttctatgaacaattgggataaaaaataggtcaaaaagcactttt
ttcaagattttgagacaagtaagcttttaaaaaaattttccgaaaatata
attttagttcggtaaaggatacaccatctaccacaaaagttttttcaaaa
tattttttctttgaccaaactaagctcttcaaagttaaaATACTCTTCGT
CGCaatcactatggtcagagcctttAAATCTAAACATTTCCGGTCTTTTA
GATTTATTGgtatccttacagtgcatttaccAAACGTCTCTGACCCTTAC
AGCATAGTTTggtttcatatcttattttgctgaagccaccctgaaaatga
gcctgagatgcCCTTGAAATAtcgacacaatgtgcaaaacaaatcaaaat
gggcaCAGCTCAAAActaaaaggaaaatatttttactgtcAAACTTGCAA
TTTAGTAGTCCCCAAACACACCCCTACAGTGTATCTAGCTAAAAGAAGAA
CCTTGTATGTAGTGCACCCTATCAAAAATACACTCTTACAATGCATTTCG
AGGGTCCCGAAAAACCTAAACTTTAAAGGCGGCACATGCCTTGAATATGA
ATGCCCAcccccccGGGATTATATCTAGTGAATTTTCAGGCATAAACCTT
TTGATAGCAATATAATATGATAATAAAATCTATCATCAATCTAGCTTGAT
GTATGGAAATCAACACAATTACCGAAGCCGACTTTCGACATTCTTGTGAA
GAATGCAAAAGTTGAGAAAAGCCTCCATGAAGAACATATTCCATACAATG
TGATGGTTCATGATGTTGACAAGTTGATGGAAAATGAGCAAAAGTCAAAC
CAGAAATTAGCTTTCTCTTCAGGATATGATTATTCAAAGTATGGAACTTG
GGATGAGGTAAGTAAAATAACTGATGACAACAAACTCTTGTCTATGTTCT
TAACTCTATACTTTGTTGAACTCTTATGTCTCAAAGTAGCTCCCTAtttt
tttCCCCCAGAAATGAGGTTTCTGAAATTTTAAGTTACATAGTATTCTAA
AattacctttttgaaaaaatatgaggGTCCCTCTATGGTGCGGACCTTAT
TTGAAATCTTGGCCATTATAacttttatgagaaaaataccTAACACCTAA
CGATACtttttttATTCCAGATTCTCAGTGAAATCAAGAACTTGGCAAAC
ATTCATAGCAACAAAGCAAGTTTATTCAATGTTGGAAAGACGTTTGAAAA
ACGAGACCAAATCGGCATCAAGGTAcgtttgaaatgttttaactTCTATC
AATTTCCATGTAAGTTGTCTTTAATTTTTAATCTCTGTCACCGAAAGATT
ATGTAGTTTTTAACATCACATCTCTACAAAACTGTGGTTTTGGTCAGCAG
CCAAAGGATTCAGTGATTAAAATTCGTTTCAGTAAAATACTGAAGGAGTT
CTGTACAATGAGTGAAGGTAGAACAGGTCTATCATCATATTTTACCCTGC
CTGGCAGTGCTTGGGATTCAAacagtctgtgatcgaaacctccACACTgc
caatcggcagaatgttagtgagacacATTGATAGACACATCTAGATGGTA
AGTGAATGTATATcaagtttatcgttctacatctgcaagtTGAGCTTTAC
TATAAGCTCATTTGACTTCAATTGgtacttcgattatcagccggattgag
aGAGAATGACAAATGAGTGAAGGTAGAGCGTCTATCACCATAAAGTTCTG
TACAACTTGAATATTGAAATCAATATTCCTTTAGATCACAAATGGCGATG
GAAATGATAAACCAGTCATTTGGGTGGATGGCGGAATTCACGCCCGAGAA
TGGATCTCGCCTGCTTCAGTAATTTATCTCGTCAAGCAGTTATTGACAAG
TGATAGTGATACAATCAAATCAGCTCTATCAAAAtatgattttcatattt
tgcctGTTTTCAATATCGATGGTTTTGTTTACACACATAAATCGAAAGAA
ACCCGTTTGTGGCGCAAGACAAGAACAAAGAGTGGATATAAATGCATAGG
AGTTGATCCAAATCGTAATTGGGGATCCCATTTTGGAGGTACGCATTTCA
ATAAGTTTCCTTGTTAATAGTTGGTTATATCATTGCACTTTAAGATTTCA
AATAACAAACATACAACGACTGATACCTTCGAGGAACTTCTAAAACTCTA
TAAACCTTTCTTATTTCGCTAAATTCTGAAATCCTTTACAGTTAACTTCT
AGTCAAATTTCAGCCTGTAGGATTTGTTAAGTTacagttttgttttttaa
agttgTTCGCTAGATTCACATTATAGGTAAGTAAAGGTTATTGACCTTTA
GATCATTGGAAACTCCAAATTAACGGTAACTGAGTGTGAAATAATAACAT
AATTCAAACACGCACGTGAAACACAGATTTATTAGAATttaggaaatttc
gagttacggAATAAGTTTTATCAGGTATTGTTAACTGactataaaacttg
ttcgagttaaagagacaccACTGTATTTCCATTCACTTTTTCAGGAAAAG
GCACAAGCGACGATCCTTGCTCAAATATTTATCATGGAAAATACGCTTTC
TCTGAAATCTCTGTACAAAATGTTGCAACCTACTTGGCAAACCTACCACA
CTTAAAAGCGTACTGGAATGTTCACGCATACAGTAATTTAGTGTTAACAC
CATGGTCTTACACTACAGAGCTACCAAAAGATTATGAAGAAATTGTAAGT
GTCTTAAATATCTATTGGTCGCGTCGTCCCTCATTCGGACACCCTGAAAT
ATCCGTTCGTGAAAGTATTGTCGTTTTTATGTAGAATTAGaattaaaata
aattaataTTTCAGATGGTTCTTTGACTTGAGTATCTTTCCAACAGAATT
TAAAGATAATTGTTCTTTATAATCATTAGACAGTTGAGGAGCTAGGAAAG
TTTTCCACTTTTTGGTGTCAGATTATTGGAAAGGTCTGCTTaagaaatac
taaaaattttgtcacacttTTGTACGAGTGGAAAGACAAAACTTTGAACC
TATAAATAAACAGTTTTCCTCTGATCTAAAATTCTAGAAGCGCGTTGGAG
ATGTATATGCTAAAGAAGTGGTCAAAAGATATGGCACAAAATATACTGTT
GGTCCTCCAGGAGAAATTTTATGTAAGTTGACCAAACAAAAGCTAAAAAG
AATGGCTACTAGTACTACACTGGTTGGAAATACATGTTTAAATTAATGTT
GAGAGAAACTAAGGTGGGGCGGGATttccttttagaaactttttcttcCT
CGTCTTCTTCTATCGCATAGTCTACTATAGaattaatgaataaaataacG
ATTCATCTGAcaactttttctttaaagacCCCGTTGGTGGTGGTAGTATC
GATTGGACGTACGAAGCTCTGGGTGTCATTTATTCTTACGCATTGGAACT
TCGTGATAATGGCAAATATGGATTCTTGTTACCGACAGATCAAATTATTC
CTTGCGCTGAAGAATTTACTGATGCTCTGATTGCCAGTGTTCTTGCAATG
AAATGA Coding sequence (CDS) from alignment at sc0000013_pilon:1036665..1041120+ >XLOC_038348 ID=XLOC_038348|Name=XLOC_038348|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2478bp|location=Sequence derived from alignment at sc0000013_pilon:1036665..1041120+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAGATTTTCATGAAATGTGGAAATATTTGTTAACTTTTGGAATTCTGGC
AGCCGGTATCGAAAGATTGGAAGGTGCAAATTAGATTTTCATGAAATGTG
GAAATATTTGTTAACTTTTGGAATTCTGGCAGCCGGTATCGAAAGATTGG
AAGGTGCAAAATCAAAGGTGCTTCGAATCAAACCAACGAATGAAGAGCAA
ATTGATGTCCTCCTTGATTTGATCGATATATATCACATCAAAGGTGCTTC
GAATCAAACCAACGAATGAAGAGCAAATTGATGTCCTCCTTGATTTGATC
GATATATATCACCTTGATGTATGGAAATCAACACAATTACCGAAGCCGAC
TTTCGACATTCTTGTGAAGAATGCAAAAGTTGAGAAAAGCCTCCATGAAG
AACATATTCCATACAATGTGATGGTTCATGATGTTGACAAGTTGATGGAA
AATGAGCAAAAGTCAAACCAGAAATTAGCTTTCTCTTCAGGATATGATTA
TTCAAAGTATGGAACTTGGGATGAGCTTGATGTATGGAAATCAACACAAT
TACCGAAGCCGACTTTCGACATTCTTGTGAAGAATGCAAAAGTTGAGAAA
AGCCTCCATGAAGAACATATTCCATACAATGTGATGGTTCATGATGTTGA
CAAGTTGATGGAAAATGAGCAAAAGTCAAACCAGAAATTAGCTTTCTCTT
CAGGATATGATTATTCAAAGTATGGAACTTGGGATGAGATTCTCAGTGAA
ATCAAGAACTTGGCAAACATTCATAGCAACAAAGCAAGTTTATTCAATGT
TGGAAAGACGTTTGAAAAACGAGACCAAATCGGCATCAAGATTCTCAGTG
AAATCAAGAACTTGGCAAACATTCATAGCAACAAAGCAAGTTTATTCAAT
GTTGGAAAGACGTTTGAAAAACGAGACCAAATCGGCATCAAGATCACAAA
TGGCGATGGAAATGATAAACCAGTCATTTGGGTGGATGGCGGAATTCACG
CCCGAGAATGGATCTCGCCTGCTTCAGTAATTTATCTCGTCAAGCAGTTA
TTGACAAGTGATAGTGATACAATCAAATCAGCTCTATCAAAAtatgattt
tcatattttgcctGTTTTCAATATCGATGGTTTTGTTTACACACATAAAT
CGAAAGAAACCCGTTTGTGGCGCAAGACAAGAACAAAGAGTGGATATAAA
TGCATAGGAGTTGATCCAAATCGTAATTGGGGATCCCATTTTGGAGATCA
CAAATGGCGATGGAAATGATAAACCAGTCATTTGGGTGGATGGCGGAATT
CACGCCCGAGAATGGATCTCGCCTGCTTCAGTAATTTATCTCGTCAAGCA
GTTATTGACAAGTGATAGTGATACAATCAAATCAGCTCTATCAAAAtatg
attttcatattttgcctGTTTTCAATATCGATGGTTTTGTTTACACACAT
AAATCGAAAGAAACCCGTTTGTGGCGCAAGACAAGAACAAAGAGTGGATA
TAAATGCATAGGAGTTGATCCAAATCGTAATTGGGGATCCCATTTTGGAG
GAAAAGGCACAAGCGACGATCCTTGCTCAAATATTTATCATGGAAAATAC
GCTTTCTCTGAAATCTCTGTACAAAATGTTGCAACCTACTTGGCAAACCT
ACCACACTTAAAAGCGTACTGGAATGTTCACGCATACAGTAATTTAGTGT
TAACACCATGGTCTTACACTACAGAGCTACCAAAAGATTATGAAGAAATT
GAAAAGGCACAAGCGACGATCCTTGCTCAAATATTTATCATGGAAAATAC
GCTTTCTCTGAAATCTCTGTACAAAATGTTGCAACCTACTTGGCAAACCT
ACCACACTTAAAAGCGTACTGGAATGTTCACGCATACAGTAATTTAGTGT
TAACACCATGGTCTTACACTACAGAGCTACCAAAAGATTATGAAGAAATT
AAGCGCGTTGGAGATGTATATGCTAAAGAAGTGGTCAAAAGATATGGCAC
AAAATATACTGTTGGTCCTCCAGGAGAAATTTTATAAGCGCGTTGGAGAT
GTATATGCTAAAGAAGTGGTCAAAAGATATGGCACAAAATATACTGTTGG
TCCTCCAGGAGAAATTTTATacCCCGTTGGTGGTGGTAGTATCGATTGGA
CGTACGAAGCTCTGGGTGTCATTTATTCTTACGCATTGGAACTTCGTGAT
AATGGCAAATATGGATTCTTGTTACCGACAGATCAAATTATTCCTTGCGC
TGAAGAATTTACTGATGCTCTGATTGCCAGTGTTCTTGCAATGAAATGAa
cCCCGTTGGTGGTGGTAGTATCGATTGGACGTACGAAGCTCTGGGTGTCA
TTTATTCTTACGCATTGGAACTTCGTGATAATGGCAAATATGGATTCTTG
TTACCGACAGATCAAATTATTCCTTGCGCTGAAGAATTTACTGATGCTCT
GATTGCCAGTGTTCTTGCAATGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000013_pilon | genome | sc0000013_pilon:1036665..1041120 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1063-1239:4280 |
| Aaloc | 976-1059:3988 |
| Aaloc | 778-975:3447 |
| Aaloc | 472-774:2685 |
| Aaloc | 370-471:2071 |
| Aaloc | 157-369:1595 |
| Aaloc | 82-156:467 |
| Aaloc | 1-78:1 |
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