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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000051_pilon:1184449..1191247- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038339 ID=XLOC_038339|Name=XLOC_038339|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6799bp|location=Sequence derived from alignment at sc0000051_pilon:1184449..1191247- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGATTTAGCAAAGAAATACAACCTGAAAAGTCCAGGTAAGGTTTT
TCTTTTATTAATTCTGATATCACTCTGCTGTAGTGTTACTTAGTCAGTGA
TTAGAATCTAGTTAATTAACAATTAATCTCATATGTCTAATAAAAACACC
ATTAGATTTTTCTTCCATGGACTTTATTAGGACCCCTCGTTTATTAAATT
TAAGATTTATCATCACAATAAAAGTCTCTTAATTTTCACTAGAAAGCTTG
ATCTATATTTGCCTTGTTTAAGAGTTTTCAGAAGTACAATATCCAACCCC
CTGGCAACTAGATCAACACATCAACCCGTTTTATTATCTGAAAATCTTTA
TTCCAAACCCGCATTATAAATTAGAAACATGCTCAAGTATTATAAAGACC
AATTTTTCCATCGTGTTACTAGTGTTAACTCGACCTTATTTAATTATGTT
TAGCTGTGAAGCGGTTAATGAGAGAAGCTGCTGAACTTAGTGAACCTACT
GACCAATACTTTGCTCAACCTCTGGATGTAAGTTAGATTTTATTGGCCTA
GTTTTCAAATATATTGAGTCTTTCTGAAAAAATCCGTTCATAGTGGTGGA
GTACATATTATTTTTCCAATGATATTTCAAGATTTTTCAAATATTTGGAC
TGACAAAAAATGTAAATATAAGAAGCTTTTGATTAAAACACCAATAAACT
TATTATGAATCTAACCTCTAGATTCAGTTATTATAAATTTGAACAAATTT
TAGCTAAAGGTTTTTTAAACAAAATAATATTTTCAAGGTATGCCAATATT
TTTTGTTTCGAGCAAATTTAAAATTTCAGACCTTTGTTTTCACAGGATAA
TCTTTTTGAATGGCATTTCACTGTTAGAGGACCGCCCGATACAGAATTTG
ATGATGGGCGGTATCATGGTAGAATTACATTACCGCCCGAGTATCCAATG
AAACCACCGAGCATCATCTTACTAACTGTAAGCATATAGTCCGGTCTCAA
AGCCTTTATCTTTGTATAGTTTTGCGTTTAGTTTTGACCATGTGATTAAC
TAATGAACAGAATATAATTGATTTCCAAGGGAATGATATGCAAAATGATT
TTCCACACTATTCCTTTATCATTGCGGTTATTTTGTTGTAGCCAAATGGG
AGATTTGAGATTGGAAAGAAAATCTGTCTGAGTATGTCAGCGCATCATCC
TGAAACATGGCAGCCATCTTGGAGTAGTAAGTTTTTTCATTAACTTGCAT
GGTTATTTTGGTTATTAAGTCTTTTCAAATTAACTGTCAATGAAATTACA
AAAATAAATAACTTCTAGGATAGCATTCGAATAAGATTTTATGCTTGTTG
AAAAGATAATCTCGATAGTGATTTTGGGCCATTCTATTAAATTTCCGTAC
ACGGGGGTAGACGAACCTTTTCAAGTCAAAAAACATTTCTTGGAAATGTA
TGGATACCAACTAGAAAATGTCAAAATTTGCAAAGAAACCCTTGGAGAAT
TTCTTTTCATACCTTGAAGTGATGGTAAACAAACCAAAATCAGTCTTTTA
CCCCCTGGAAATTTTAAAATAATTTTTTATCCCCTGGAAAAATGAAAATA
ACACCCTTTTAGACCCCCTGGAAATTCTGCTTCAATCCCCTGGAAATGTT
CGTCCATGCCCCTGTATGGGTATAAGATGGAATGGCTCATTACGATGTAA
AAGATCATTTTCCCTTTGAAATTAATATTCCACTTCTTAATTACAGTTCG
TACAGTATTACTCGCTTTGATTGGTTTCATGCCAACACCCGGCGGTGGAG
CCATCGGCGCTCTAGATCATACGCCAGAGGAACGGAAAGTCATGGCTAAA
AGGTATGATGATTCTTAATTTTTTATATTTTGTCTTTTTATACATTATTG
CAGGTTTTTCCTTCAAAATTGAAAATAATTTCATAGGCGGTTTTAAACCA
TGTCAAACTTATCAGTTGAAGAGATTTGTAATTGTAATTTCATTGTCTTT
TAACGAGCGTTGCGCCCCTTCGTATGTTTCCGACGTACTTGCTCTATTGT
CTTAAATCCGCCAGCGAGTTTGGCGGTTTTGATCCTTCAAAATCTGTCAA
AGGTAGCTAAATCGATAAAATACTAAACTTTACAGTAAATCGAACATTCA
GTAAAGACACAAAAACTATTTTCATCGGGTGTAGGATTGATTTTCAAAAG
AATTTAACTAACTCGTACATATTTTAGATCGAAAACCTGGACTTGCGAGG
CTTGTGGGAGCAATAACGAAGCATCACTTTTAGAAAGTAAGAAAGTGTAG
GATTGATTTTCAAAAAGATTTGACTAACTCGTACATATTTTAGATCGAAA
ACCTGGACTTGCGAGGCTTGTGGGAGCAATAACGAAGCATCACTTTTAGA
AAGTAAGATTTTCATTTTTCCGATTCGTCACAAATTGCCCTTTTTAATAC
TGATAATGATAACCTTAGAGAACTAATTTTCGCGGAACTTGTTTTCGCGG
TGCGAAGATACTAAATTAGTGCATTTTGTGGAACTAATTATCGTGTTTGA
CACCCACTTTTTGCCGAAATTCTTTCATATTCCTAGGGGTTTTTGAGAAT
TTTTAGTATAATTATATGGTTGATTACATTTAGCTTAGATTTGTAAAGGA
CGAGCGGGGCGATAAATCCGTAATAGCTCCGCTTTTTTGTAATCGCCCTG
ATGTAAACAAAAATTTCTAACAAAATATCGTACGAAATTTTTAAGCCAAT
CAAAATAAGAGTGTCAGTCGAATGTTTTTTTATAGTTTCGAATGTTTATA
TAAGTTTCGAAAAGAATAGCGATTAAGCGTTCTTCAATTCTTTTTTTGAC
CATATAATTAACGCGGAATAACATGGTATTCTCGGGTGATTTTGGATTAA
TAACCCCTCGTTTCATTGAAAACACTTCAAAATAGCCCTCACTACGTTCG
TGCTATTTTGAAATGCTTTCAATGAACCTCGGGGTTATTAATCCCAAATC
ACCCTCTCAACCATGTTATTACTAGTACAAATTACATTTCGCAGAAATAA
TTTTCGTGGTAGACACAATAAAACGCGAAAATTAGTTCTGCGAAAATTAG
TTCCCTTGATTTCTGCATGGTCGGGGTACACAAAAAATTACTATGAGAAA
AACATTGGCTTTACAAGATACATATACTGTAAGAAATCAAATACAAGAAG
TAACCACTCAACTGTTCCTTTAAATTGGACAAATTTTTCGTGAAATTAAA
TTTTACATTTTCACGGATCTTTTAAAGGTTTTAGTTTTATGTCTTATATC
AGGCCGGTGTCTCCTATTATTATATTGTGTTCCATTTGGTGCTAAATAAA
CAAACAATAATTTTTCTTTTCCTCTTTCTGACCAATTTTGCTCCACATCC
ATGTCAATGAGGCCCCCAGCGGTAACTCTGATCACGATATCACGCAAATC
TTTGCCTCCAATGACGATCAATCAAATCAGCAAAAAATTGAATAATCACG
CATCCCTTTGAAAAAGTCTAAATCACGTATAACGGCTCAAAAACTTTCGA
AATCACGAACACGTTTTGATCCCTGACCACGCAATCACGAAAAAAAAATT
TCCAAATCACGTAATCACGCTACAAAAAAGTCCCTATCACGTTATCACGC
AAACCGCTGGGGGGGGGGGGGTGGCTCGTCAATTCTATGTCAAAAAGCTT
GTAAACGATATCACTCTTATCTAAAAACAAAATCTTTAAAAGGGCGTTCT
ATTTACGAAAACTACACTCTTTTTCTTTCTTTTTTCTTCAGGAGATCCAA
CGAAAGAAAAGGAAGAAACTGAAGAAGTAAAAGAACTTGCTTCTCAAATC
AATTTCAAGGTAACAGAAAAAATTTCCATACACGTGTTTTTTATATAAGA
ATATTCATATGGACTTGAAAGAAAGAGATAGATGAACATACAGATGAACA
GAACATGTCCTAAAGTCTGTCTCGAAATAATTTGAAGCTGGAGACAAAAA
TGGCTGTAACTTTTGATAGAGTTCGAATCAAGTTGCGATTAAGTGCTTGT
TAAAATGATATTCGTGAGTGGAATATTATCAAGTAAAAAAATTGAGAAAA
AAAAGGAAAATGAAAATGAAAAATGAAGAAGAAAAAAATCAACTTTTTGT
AGAAATGTGGTATAATTACCATTTTCACAGGAGTGACTCTTCAATCTTAG
ATCATCATCAATGTGAAAAATTTTTTCACAAATATTCATTCAATCAAAAG
ATATCAAACAAAGTTTATTGCTGGTTGATCGACAAAAGGCTGTTTTTTTT
GTCGTTTTTTACCAGTTTTTACTATTTTATAGAGTCAACCAGCAATAAAC
TTTCTTTGATATCTTTTGATTGAATGAATATTTTTGAAAAAATCACTCCT
GTGAAAATGGTAATTATACCACATTTCTACAAAAAGTTGATTTTTTTCTT
CTTCATTTTTCATTTTCATTTTCCTTTTTTTTCTCAATTTTTTTACTTGA
TAATATTCCACTCACGAATATCATTTTAACAAGCACTTAATCGCAACTTG
ATTCGAACTCTATCAAAAGTTACAGCCATTTTTGTCTCCAGCTGCAAATT
ATTTCGAGACAGACTTTAGGTAGCGTCATCTCTTCCTTCGTATCGAGCGT
AAAACTCATACTCTTCGGGATATGCGCACTGCCAATCAATTGTCTTTTAA
ACATTCTTTTTATTGTAAATCTCTATTGATAAACTTCTTTTGTTTGAAAC
TTCTATTGTTTAATTTATTAATATGCGAATTCCCGGTGGGGGTCAATAGT
GGCCGCCCATAACAGTGCCTATAGACCAAGAGTAAGGCCAAGAAGGCTGG
AGCTGTTGGATAAGTTGGAGTTTTTACAAGCTCTTACTTGATTTGGTTGG
TCGTTAAGCTATCATAAAACAATTTTGTTGCTTTTTCTAAAGATCGCGTC
ATCTCTATTACTTTAAATGACCAATTAGTGAAGTATCTTATAAAAATTTC
AGCTCATCCCGAGCTGTCTATTGTGTAGGCTAAACAGGCCCTATCCATGA
CAGCATTCACTATCCAAGGATAGCGAAATTACTACGCTCATTTGGCCCTT
CCAGCTCGAGTTGCTGGACGCTGTATCGTAACTATACTACCGGGTGTCTC
TGAAAAAACTTCTCCCTGTTTGATTCAAGATTGCGAAAAAGTGAAAAAAT
ATATTAGCTTGATTTTTTCGAAATCGTTTAGAGGAGGGTTTAACTTAAAT
TTTGGTATATCAAACTTTAAAATTGCTTCATTAGACCAAAAGTTATGACA
AAAAGAGTAAAAAAGCTTTTTTCAAAAAGAGCGAAAAAAGACGAAAAAAC
AGGGTATCAAATCTTTTGTTAGAGAAAAAGACACTCAAACTTTCTCTTCT
CCACTCAAATAGACTCGCTAAGCTTTGGAAACTTTTGGAAACATTTTGAT
AAAAGTTTGTTGCTTGTTTAAACTTCTTGCTCATTAATGAATCCAAAAGG
AGCTCTTAATTGGCAATAAAAATCATTAAAAACGAATAATAAAACAAAAA
AGATGTACAAAAGTAAAACTTTACTGTCAATAAAGTACAGTGTTTTCTTG
TCTAATTTAATACCCTGTTTTTTCGTCTTTTTTCGCTCTTTTTGAAAACA
ATTTTTTTACTCTTTTTGTCATAACTTTTGATCTAATGAAGCAATTTTAA
AGTTTGATATACCAAAATTTAGGTTAAACCCTCCTCTAAACGATTTCGAA
AAAATCAAGCTAATATATTTTTTCACTTCTTCTCAATTTTGAATCAAACA
GGGGGAAGTTTTTTCAGAGACACCCGGTAGAACGACTCGAAAGTACAGCG
TATCCTCAGTATAGAAACCACACCACAAAGCCAGGCATATCACAGCACCG
TGTGTGAATCATTATTTACTTGTAAAATGTTATTTATCTCATAATAATTC
TCAAAACTTTCACAAAAATGCCATGATGCTCCTTGAAGTATGCATTACAT
GTTGAATTTAGGTTGAATTTGGATCCTACTACCGTTGAGAAGAATATTTT
AAGATGGTTTTCCCTCAAAAAGTTTAGAATATTGGGAGATTACACGTTTT
TTTTTTTAGAAACTAGTTTTACCAAGCAGTCTCAATGTTTCCTAAGAAAT
CGGCCTTTTTAGCCTTAAATGTTTCTAACATGTTTCTGAGCCTCATGTTT
CTTAAAAGTGTGTTTCTTAAAAAAAGAAAAACGTGTATATATTATAATTA
TTCCAAATTTGTGTTTCTTAGGGGGAAGATAAAAGTAAACAGTCAGCCGC
AACACCAACTCAATCTCAAACAACGACAACGACGTCACAATCTGCCATAA
ATAACTCACAACAACAAGCAGCTGCTGCACAGATGTCTCAAATGTATGCT
AACTACAACCAATTCTATGGTATGCAACAACAACAACAAAACCCTATGTT
TGCCAACCAACAATTCCAACAACCGTCTCAGCAACAAACACCGTCTTCTC
AACCCACAACGACCGAAACTACAACAACTCAATCGTCAGCTCAACCGAAT
ACAGGCTCTACTGAAACAACGACAAACGAAAATACTGATACGACGAACTT
ACGACAACGCCGACAAGGTGCCGACAGTAGCCGCTCTTCTTCTCCGGCAA
CGACGCCGACACCAACACATAATCAAACACAAGGACAATCAAAGTTAGAA
ACTGTTTCGTTTTATATGTTATGGATTGTATTAGTACCACTGGTACTCTT
GATATTGAGACGTTTAGGAATGGAGAATTCGGGTATGGGAAAACATTAA Coding sequence (CDS) from alignment at sc0000051_pilon:1184449..1191247- >XLOC_038339 ID=XLOC_038339|Name=XLOC_038339|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2184bp|location=Sequence derived from alignment at sc0000051_pilon:1184449..1191247- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAGATTTAGCAAAGAAATACAACCTGAAAAGTCCAGATGGGAGATT
TAGCAAAGAAATACAACCTGAAAAGTCCAGCTGTGAAGCGGTTAATGAGA
GAAGCTGCTGAACTTAGTGAACCTACTGACCAATACTTTGCTCAACCTCT
GGATCTGTGAAGCGGTTAATGAGAGAAGCTGCTGAACTTAGTGAACCTAC
TGACCAATACTTTGCTCAACCTCTGGATGATAATCTTTTTGAATGGCATT
TCACTGTTAGAGGACCGCCCGATACAGAATTTGATGATGGGCGGTATCAT
GGTAGAATTACATTACCGCCCGAGTATCCAATGAAACCACCGAGCATCAT
CTTACTAACTGATAATCTTTTTGAATGGCATTTCACTGTTAGAGGACCGC
CCGATACAGAATTTGATGATGGGCGGTATCATGGTAGAATTACATTACCG
CCCGAGTATCCAATGAAACCACCGAGCATCATCTTACTAACTCCAAATGG
GAGATTTGAGATTGGAAAGAAAATCTGTCTGAGTATGTCAGCGCATCATC
CTGAAACATGGCAGCCATCTTGGAGTACCAAATGGGAGATTTGAGATTGG
AAAGAAAATCTGTCTGAGTATGTCAGCGCATCATCCTGAAACATGGCAGC
CATCTTGGAGTATTCGTACAGTATTACTCGCTTTGATTGGTTTCATGCCA
ACACCCGGCGGTGGAGCCATCGGCGCTCTAGATCATACGCCAGAGGAACG
GAAAGTCATGGCTAAAAGTTCGTACAGTATTACTCGCTTTGATTGGTTTC
ATGCCAACACCCGGCGGTGGAGCCATCGGCGCTCTAGATCATACGCCAGA
GGAACGGAAAGTCATGGCTAAAAGATCGAAAACCTGGACTTGCGAGGCTT
GTGGGAGCAATAACGAAGCATCACTTTTAGAAAATCGAAAACCTGGACTT
GCGAGGCTTGTGGGAGCAATAACGAAGCATCACTTTTAGAAAGAGATCCA
ACGAAAGAAAAGGAAGAAACTGAAGAAGTAAAAGAACTTGCTTCTCAAAT
CAATTTCAAGGAGATCCAACGAAAGAAAAGGAAGAAACTGAAGAAGTAAA
AGAACTTGCTTCTCAAATCAATTTCAAGGGGGAAGATAAAAGTAAACAGT
CAGCCGCAACACCAACTCAATCTCAAACAACGACAACGACGTCACAATCT
GCCATAAATAACTCACAACAACAAGCAGCTGCTGCACAGATGTCTCAAAT
GTATGCTAACTACAACCAATTCTATGGTATGCAACAACAACAACAAAACC
CTATGTTTGCCAACCAACAATTCCAACAACCGTCTCAGCAACAAACACCG
TCTTCTCAACCCACAACGACCGAAACTACAACAACTCAATCGTCAGCTCA
ACCGAATACAGGCTCTACTGAAACAACGACAAACGAAAATACTGATACGA
CGAACTTACGACAACGCCGACAAGGTGCCGACAGTAGCCGCTCTTCTTCT
CCGGCAACGACGCCGACACCAACACATAATCAAACACAAGGACAATCAAA
GTTAGAAACTGTTTCGTTTTATATGTTATGGATTGTATTAGTACCACTGG
TACTCTTGATATTGAGACGTTTAGGAATGGAGAATTCGGGTATGGGAAAA
CATTAAGGGGAAGATAAAAGTAAACAGTCAGCCGCAACACCAACTCAATC
TCAAACAACGACAACGACGTCACAATCTGCCATAAATAACTCACAACAAC
AAGCAGCTGCTGCACAGATGTCTCAAATGTATGCTAACTACAACCAATTC
TATGGTATGCAACAACAACAACAAAACCCTATGTTTGCCAACCAACAATT
CCAACAACCGTCTCAGCAACAAACACCGTCTTCTCAACCCACAACGACCG
AAACTACAACAACTCAATCGTCAGCTCAACCGAATACAGGCTCTACTGAA
ACAACGACAAACGAAAATACTGATACGACGAACTTACGACAACGCCGACA
AGGTGCCGACAGTAGCCGCTCTTCTTCTCCGGCAACGACGCCGACACCAA
CACATAATCAAACACAAGGACAATCAAAGTTAGAAACTGTTTCGTTTTAT
ATGTTATGGATTGTATTAGTACCACTGGTACTCTTGATATTGAGACGTTT
AGGAATGGAGAATTCGGGTATGGGAAAACATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000051_pilon | genome | sc0000051_pilon:1184449..1191247 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 565-1092:529 |
| Aaloc | 499-564:3007 |
| Aaloc | 439-495:4456 |
| Aaloc | 334-435:5052 |
| Aaloc | 247-330:5659 |
| Aaloc | 115-246:5955 |
| Aaloc | 43-114:6345 |
| Aaloc | 1-39:6800 |
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