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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000266_pilon:54767..58109+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038320 ID=XLOC_038320|Name=XLOC_038320|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3343bp|location=Sequence derived from alignment at sc0000266_pilon:54767..58109+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATCTGGAAGGCTTTGTTACTCATCACTTTCTTAGTGTACACTGT
TTACTGTGAGttttttttGGcattataatttctttttcacagaTAGAAAG
AAGAGTTCTTTTCCCGGCTCTAATTgaattatatataatatttaagagca
tacactacacaatataattgtcaggcaatatattgatgatatattgctga
atgccaGCAATATATttaaaaggtgtccgcaatatattgtacAGCTCAAT
TTGCATTTtattttccaacaatatagaAGGGGGattatttacagaaaaaa
aaatttctttttataatagagtacctgttatttacttcgtacattacggt
ccaaTAACGATATTATCAACTATtattcgtcaatatattgtgtagtctaa
gtaacccttaacattttcaagtttttgaaaaacatatttcTCAAAAGACA
TTCTTTTAGCCTCTAAAAATCTCTTTCTAGGTTTCTAGTATCAACGTTGT
TTATAGAAAAGAAGTTAAGTTGTGTATTTACCAAGTCCATGTAGAGAATT
ATAGCCTGTAAACCTGTTCTCTTATCTTCAAAGGTGAAGAAACTGAAGAG
ATTGAAAGCAGCTTGGAAGATGTTGCTGACATTGAAGAAACACCTGCTTT
AACATCGAATGACGAAGAAACAAATGACGAAGATGAAGCAGAGGAGAATG
ACGAACAAGAAGAAAGTCAAATTCAACAAGATGAAGAAAACGGTATGAAA
AGATTTCCATCCCATTAAGGCTTTGCATGAAATAGCAAAACAACCAATGA
CCAATGAACAAGAAAATCACAGTCTAAATATTCAAACTGAAGTGGGAGAT
CGCTTCCAACCCCCTATTTGACAAAGGAAcccccccTGAAAAgtattagc
ctatttcataggattcgtgcatcGGTTTTATGCCATTTTCTATTCAAATT
ACACGCCACAATGCACACAAATACGAACATATTTCCCTTTAATTAATAAC
GCGGGGGATtacccacagatatctgtaaagcccgaagggctagataggca
actttaagctttctccagcaaaaaaaAGTGAAGCAAAAATTTGACGTTTT
AAATTTTGTGCTGATGGATAGGATCTAGCATTTTAATTGTTTTCAGAGAA
CGAGATAAAAAAAAGTAGGCGGCAAACGCTATTTCGCATCTCTCAAACCA
GTGAAATTGCTTGTTGTCACGTGATTTTTTGGTAGGAAATCCTACCAAAG
CCTGCTTCACTTTTCGATAAAGGCCGCAAATCTAGCCCTTCGGGCTTTAC
TATCTGTGGGATTACCTACTTTTCAAAAGTACAGCCTTTTTGTGTTTCCT
GCCAACTACTAGGTGGCTTAAAGAGACATAAAAGCACTGACGAAATTTGT
AAACAAACCGTATGCAGCGCGATACAAAATCGAGACAAATGTCACATGTC
AAAACAAAAAAATAAAAACAAATATGTCTGATTTTGATTGTTTTGTTtcg
aatgttttacaagtttgttttggacacgtgattataattgttctctttaa
tgacacgtggttcgcacaatgttaacattttactacttttatgttcCTTT
AAGGTCGCTTTCAATCTTCTAACATCAAATGTAATGAACGCTACACTTTG
TTAACCATCTCCCAAAGCTCATCttatttcataaaatcaatCCCACACAT
AATGGGCTCCAGAAAATATTTGTAtattgggggtggaggatataaaattt
tttggaaatttattccccggacattgtgaactttgacccccggacaacag
atctcatcccccggacaagcatcggttgacccctggacatttaaaatcac
ccctaatcagaacaaatttgcccccaaaacaacgcaaattttgaagattt
ttcactaccccccggacaaaatatccaatatatcctccatcccccatgTA
CAAAAGTTTTCCGGAAGAGTCAAATGAAGTCTCAACCAAATTTAAGACAC
AAATAAGTTACTCTAGAAATAATATAACCTGTTTATAGATCCTGGACGTC
GCCCTCACCCTAGTTCAGGGGGCTGGCAACTAGTACGAGGAACATGCAAT
TTAAAAAGATTATCGAAATCGTGCCATGTTACGCGAAGAAGATGTTTAAG
ATACAGATACCATGGTAAGTTAtaatatacacgctttttttataagaatg
cactttataagaatgtccatgatgaaaatggccaaaaaaataagaatact
gtaatgctaagaatatcaccatcatggaattttgctactcaagctaagaa
tgcgattttttagagcattttcaattatacattgtcaattacccccaaga
aaggctcactcctttcacaaaaatgccattttatgctcgAGGCGTATGTA
CTAAacttaagaatgctgtaagaatattttaggattcTTTTCCCAATAAA
GCTAGGAATATCcatgttgaaataaaaaaagcgtgtacatgtATAATAGG
CAGATATTCAATaagtaaaagttggttatttagatttattaacccgaggt
gatgtgaTATTCAACGAGGTGAAGCtgagttgaatatacatcaccgatgg
ttaataaatccaataaccaacgaaaacctattgaaatatatattctatta
tatacttagaggcaaaaacaaaagtataaaatatataaatagtCGAACGA
TTcacataaaacactcccataatcgaacaTTAGaatgcttttctttttta
atgattttcttaattactttgagtcataaaatttgcTCATGAAATCGATA
GTAGATTTGttcaaataaatttctttgataagaGCGaaaaaaaGACAAAC
TTTGAAAgtcgaatttgaaaaaaaaattctactatGGTATAACAGCCGTG
GTATATTAGGAATTATCCAATCGCTGTTTTTGCCACAGAAAATTAATCTT
Gttgaatagaccttatcggagtttttgatttttctaaaaaagcgatgcat
tgtggaattgtttcgagtgtattacaatagaaatctcttaggaattcttc
gagggaattctattgtaatacactcgaaacaatcccacaatgcatcgctt
ttttagaaaaataaaaaaccccGATAAGGAATATTCAATCTTTATCTTAA
AGGATCATACGGAAGAAGATGCATGattcgaaaaattttcagaagttGTA
CAACCGTTTCTCGAAAGCGATGCAGATTCTGTCGCCGTACTAGACACGGT
AGAAAATGTGAACGTCGATTTATCGGTCAACGAATCAGACGAACAAGACC
CGATAATAAAGTTGTAAACATCCCCCCACCACGATATCATTaa Coding sequence (CDS) from alignment at sc0000266_pilon:54767..58109+ >XLOC_038320 ID=XLOC_038320|Name=XLOC_038320|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1062bp|location=Sequence derived from alignment at sc0000266_pilon:54767..58109+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATCTGGAAGGCTTTGTTACTCATCACTTTCTTAGTGTACACTGT
TTACTATGAAGATCTGGAAGGCTTTGTTACTCATCACTTTCTTAGTGTAC
ACTGTTTACTGTGAAGAAACTGAAGAGATTGAAAGCAGCTTGGAAGATGT
TGCTGACATTGAAGAAACACCTGCTTTAACATCGAATGACGAAGAAACAA
ATGACGAAGATGAAGCAGAGGAGAATGACGAACAAGAAGAAAGTCAAATT
CAACAAGATGAAGAAAACGGTGAAGAAACTGAAGAGATTGAAAGCAGCTT
GGAAGATGTTGCTGACATTGAAGAAACACCTGCTTTAACATCGAATGACG
AAGAAACAAATGACGAAGATGAAGCAGAGGAGAATGACGAACAAGAAGAA
AGTCAAATTCAACAAGATGAAGAAAACGATCCTGGACGTCGCCCTCACCC
TAGTTCAGGGGGCTGGCAACTAGTACGAGGAACATGCAATTTAAAAAGAT
TATCGAAATCGTGCCATGTTACGCGAAGAAGATGTTTAAGATACAGATAC
CATGATCCTGGACGTCGCCCTCACCCTAGTTCAGGGGGCTGGCAACTAGT
ACGAGGAACATGCAATTTAAAAAGATTATCGAAATCGTGCCATGTTACGC
GAAGAAGATGTTTAAGATACAGATACCATGGATCATACGGAAGAAGATGC
ATGattcgaaaaattttcagaagttGTACAACCGTTTCTCGAAAGCGATG
CAGATTCTGTCGCCGTACTAGACACGGTAGAAAATGTGAACGTCGATTTA
TCGGTCAACGAATCAGACGAACAAGACCCGATAATAAAGTTGTAAACATC
CCCCCACCACGATATCATTaaGATCATACGGAAGAAGATGCATGattcga
aaaattttcagaagttGTACAACCGTTTCTCGAAAGCGATGCAGATTCTG
TCGCCGTACTAGACACGGTAGAAAATGTGAACGTCGATTTATCGGTCAAC
GAATCAGACGAACAAGACCCGATAATAAAGTTGTAAACATCCCCCCACCA
CGATATCATTaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000266_pilon | genome | sc0000266_pilon:54767..58109 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 343-531:3155 |
| Aaloc | 217-339:2041 |
| Aaloc | 58-213:586 |
| Aaloc | 1-54:1 |
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