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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000188_pilon:332787..338591- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038318 ID=XLOC_038318|Name=XLOC_038318|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5805bp|location=Sequence derived from alignment at sc0000188_pilon:332787..338591- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCGACAACAAGCTGAAAAGTGGAAAAAAGGTAAGTGGATCGGGTT
TTTACGTTTCTTTGACATTCTGCTGTCTCAGTGACATGGAGAGACTCGTT
TAGCAAGTGTAGTATTGAGCAATTTGAAAAAGCTTAATGTTATTGTGAAT
GTTATTGCATCTGCCTTATTTGCTTTTCTGTTTTAATCCATACTGTATTG
TCTACGACCACCCGGGGGGGGGGGCTTTTTTGAAGTATGTTTAATTATAC
CTTCACAATTCTATTCTCTCTATGGATACCCCTGTGTCACAAACCCGTTG
GGTGCCCAGCCCCACAGGAAAGATCGGCAAAAATTTTGTCCCTGGTGGGA
AAATACCTTATAATTTCAGCCCCACTTGGAAATTAACTTTTATTTCAGCC
TCATTCGATATTCAATTTAAAAATTGCACTTCAAAACCATTGCCACTGAA
TTTTTTACCCGTGTAACAAAAGGAATTTCTATCCCCATCTTATTTCAATA
GGAATTTTTATCCCCACTGAGAAAAAAATTTCCATCGGGGCTGTGAGACC
ACAGGCAGGGTTGTCTACGGGTTACAAAAACAGCAAAACGCCAAACCATA
GAAATATTATCAGATAGAATGAATTGATGCTTTTTTCCTCAAAATGAAGC
GTGTCTGTAAGGGGTCCTTTAGTTGCAATGGGAATTCAATTGCACGTGTG
CAATTATAATGTCATTTCTTTGTTCTTATCGTATTTTAATCGCATTTTTT
CTCGTGCTTGATTGGATTCTTTTGAATTCTCAAAAAATTATGTACATAAT
TTGATTATTTTCAAATGGAAATTTCGGGCACTTCGGTCCCCTTAATGCAA
ATAAGAACTACAAATTTGAGATCAGCTCATTTTATAGATTCACCAGTGTT
GAAAACTATTTGAAAACGCACTTTTAAGAAAAGAAATTTGGGTGTCAAGT
TTTCACCTAAATTAGTTATTCTTTCCGTATAGACTAAAATTGATTTTTTT
AATTTTAGGTGTTAAAATCGATGGAATCACTAAATTAAATCAATCGTTTT
CCAAAACTAAAAATTTCGTAACTGAGAAAAAATACCGCGCAAACATACCC
TTATAAAGAGATTTCTATCCACGCATCAGATTTTGAGAAACTGTTTTTAC
GACTAATAATCACTTTACAAAGGGAATCTGAATAGATGATGAAGTAGCCA
AAGTGATATATTATTCGATCTGATAACAGTTCACTGACCAAACACTGCAT
GGAAAGTCGTCTTCTCTAACGCAAGATATAGGACAAAAATGTTAACCTTT
CTCTCAATTTTCTTGTTTTGAAATCATTGAATTTTCTTCTGTGCGAAAAC
AAGTAACAGTGAATCTTCACTGTCTCTCGAAAAGCTTAAATTTTCTAAAA
TCGAAAAAATTAACTTTTTGTTGCACAAAATGATCATATTTTTAGCCACG
AAAAGTACCACTTTTCTCTGAAAAGAAAATATAAGAATATTTCCATGCAG
TGAAGATTCACTTTTACTTATTTTCTTGTTTATGGAAATATTAAATTCAA
AATAGAGAAAAGGCGCACCTTTTTTTGTGAAAAAATTACGAAATCTTTTA
TATTAAAAGAAAGATTAACAATTTATTATTTACGCATTTTCGAAAAGATG
CAGATTTCTAAACCAAAAAAACTTTTGCTTATTGGGAATATATATTCTAG
GTAAAAAAAAATACTTGATCCGTCTCATTTCTTAACAACACCCCTGTGTC
ACAGACCCGGTGGACCCCCAACCCCGCTGGAAAAATAGGCCAAAAAATAT
TGTCCCCGGTGGAAAAAATACCCTACATTTTTAACCCCACTGAGAAATTG
CCCTATGATTCTATCCCCATTGAAAATTGAATAGAAAAAATTGCACTCCA
AAACCATCCCCACTGGAATTTTTGAGCTGGAAACAACAGATTTTCTATCC
CCATTGGGATTTCGATAGAAATTTTCATCCCCATTGTGGGAAAAGGTTTC
ACCGGGGCACTGAGACAGGGGTGTTTAACATTGAAACAGTCATAAAACGT
CTGGTATGGAAACATTAAATTTCAGGTTACTGTAGCGAAAATATTTCATT
CTGAAAGTGATTATTTTAAATACGAAGTTTCCATCAACCGACATTGCTGC
CATTTAATGAAATTAGACGCTAGATTAAATTCGATAAGATATTGAATGAA
AATATTCTTGGATGATTTTCTTCTTTAAAATTTAAGTCAATATATTAAGT
AACTTCATTATATATACTCATAATTCTTGTGCTAAAAATCTTATACCTTA
AAAAAAGTATACCTTATTTACACAAAATGACTTTAATTAATAAAATAATG
AATTACTAGCCGGTACCCGGCGTCGCACGCCGGTTAAGCTGTAGCTGAAC
GCAATAAAAGTCCTTTGGATGGAGACGAATTTTTTTGTTTAAGTCAAAAG
TTATCAGGAAGAGCATCGTTTACTGTACCAGTGTCGTCTGAAACAACTCT
GAATATGCCGTCCAGTTGAAATGACAATTCTTCAGGAAAAAGTGGGAAAG
TCTCAAAGAATAGTGCAACTTTTTGTTTTTATCAGATTGAAAAAATAAGA
TAATTCTAAGTTACTTTTTTTAAAACCCTTGTCATAACTCTTCGAATTTA
AACATGTAAAATGACGTACACACTTTTTGACAGTAGCGACTACTTGAATG
TTTTTATATGAAGAAAGAGATTGACTAATTTTCCCTTTTTGCTTTTTATC
GCCTTTTGAATGCTGTCTTTGTTTGGTTTGACAACAGTAGCGGCCTGGCT
TAATTTTCTTGGTGGTGCAAACTATGAATTTGGCGCCCCTGGTATTTTTG
TCCTTATTTGCGCCCTCCATCATTAAGTGAAAATACTAAACTGTAAGAGC
AGTGACTGGTTGAAAGTAACGCCCCTAATCTTTGAAATGGAAATTTTATA
CCAGGTAAGTCGATTTAGTCTATATTTTTGCTTTCTAAAACTCTTATCAG
AAAAATTACCTGATAATCTTTAAACTTTCGCGCCACTGGTGTTACTTTAT
TCTCTATTAAAGATCAATGGCTGAAATAGGCCAAAAATTCTAAAGTTTGA
AGGAAGGGTTATTTGTAATTTTGGAGCCGCAGGCAAAAGATTTTGGTGTA
AGAAAGGTTAAACAGCTTAAAAGATCTTCTAAAACGGAGAAAGTTAGTCA
ACAAGTTTTGATCATTTTGGCAATCTCTCATTTTTTGGTTGAGCATTCTC
TTTAACCCCTGGTGTTTACACAACACTTCTCTTACTTCTGATTCAATATT
GATAGAAGTTTTGAAAAAATTCAAGAGAAAGGATGCAAGAAGGTAAAATA
AAGCGCCGCAGGCGAAAAAAATTAACATTGTACTTATAGATACGCCAGAT
TGCCCAATTAAACATCAACAAAATTTTGGCGCCCCTTAAAAAGCTCTTTT
GGCGCCCCTCTCAGATCTTTCTGGGTGGTGCACTGCCAGGCCGCCACTGT
TTGACAAACTTTTTGATTGTTATGTCTGGTTATGTTTTGATTTACATTTG
AAGTATTCTTTTCTATTAAAGGAATTTGTTTTGAAAAGAATTCGAATGTC
ATTAATAAATACGATCGTTAATTACATTCGAAAAGAATTTAAACAAAAGA
AAAGAGAAAAACAAAAAAACGGGCATGCCTAGGCAGAAATTAAAATTACT
AAATGTAGACGGGCCTTAAATTTCAAAACAAAGGCTGAATAAAGTCTAAA
CCAGGCTCTATCCGATCTGTCAATCAAAACAAACTTATCGAGAACAAAAC
ATTGCTTGTGAAATCGAAAGTGACACACAGACAGAAAACAAAATGACATA
CGCGTTATACTAATAATATATAGATAATATCTCATTTTTTAAAAAAATGA
CAAAAATTGATGTGGTATAATACGAGTTTCGGTATAGGGTTAGGGGGGGG
CTATTTCTGACAAAATTTGACATTGTAAAGCATTATTCGAATTTAAGAAA
TGAGAAACTGGGTGTGTAGCGCTCACAAAAGCACCACCTTTGTCCATCAG
TAATATCAAAAAATGATACTCTGACTACGCGATTGTGGGATTTCTAGCGT
GAACTATCATTTCTTACATTTAGTTGTTTAAAAAGACAAGCCTTTGATAT
ACCTTCTATACCCAACGCCCTATTTAATAACACGTAAATAAAGTTTACTT
TTTTGGTTTCAGGAAAATCTCAGAAAAAAGTTGGGCGTCCATTTGCATTA
TCGGAACAAACAGAAAAGTATCTCGCTAGTAGCTTGGTGCAAGAATTGGC
AAGATGGCGCTTGCCTTTGGAAACACGAGATTTATCGGGATTGGTCCAGT
TTTACGTTCGACGCCAACGCCTATTGGTAAATACAGTAAACTTTCTTGAT
GCGAACTGACCATAGTTGAAAGATGTGAAAGGACTGGTGGTATTTCATAT
TAGTTTTTGAGGCGCTTGAAACTAGGGGGTGGCGGGGCTTTTCCTGGATC
ACTTTTTTTGAATGCATTTTGGCACACAAGATCCTTGTCATATAAGGTAA
CTTTTCACCAAAAACATTTTTCAATGAACGATTTAGGAGAGGGCATTGTC
TATTGTTACATAGCTGATTTTTTTACTCTTGAATGTAACACTGATATGAA
ATACGGGAATCTCATATTTATTAATTTTTACTTTATAGAAATTCAGATTG
TGGAAGGCCAGACCTTCAGACAACTGGGTGAGACGATTTGTTCGGCGCCA
CAAACTTTCCTTTCGGAAAGCTGACAAGTTGAAGACCACTAGGGCGTCCG
TAACACATGACCAAATTGTAAACTATTGCAGGAACATAGCAGAAGAGTTA
TTAGGTAAGACAATTGCTCCTCTTTACGGCGACTGTTACATTTAAAGTAC
CGCATTTTTATTTATTCAGTCAAAAATTCTTGAAAATACGCACATTCGCT
TCTCGATTCATGATTTTATTGCCAAAGATTCCCTGGTCATTGTAGACTAT
GCTATAGTCTAAGACGAATTCGAAAAATAAAGAATACCCTCAAACACGCA
AATTAGCAGTCAGGCGAAAATTTTGTCCGCGCGGGCGAAAAATAGTCGGA
GGGGCTCAATGTCGTAAACACAGACTCTTTTTTTCCGCCATGCGACATAT
TACGTTTTATAATATACAACTATTTACAGGTGTACCAAACAACTGCATTT
TTAACTTTGATGTGACCAATTTTGCCAACAACATTGGGTAGGTATATGTT
AAAATTACGTTTTTTTTTTTTTATTTTGATGGCGAAACTGTGCGCAATGG
AGGGGTAGCACAAACCTGCGTACAATGAATATAGCTAGACCCTAAGTTCG
TAATTTTAAACGTTGCCGAAAATTTATGTTAATCCACACGAACAGACGTT
GTTTCTAAATTTGTTTGATTTCATGGGGGTTTTAACACCGAGCTTTATAT
GGACCCTAGGGAGGCAGTAATTATTTCGGTCAACTTCTGTCAAGTCTTTT
ATCAGATTTTTTTTGTGTGGTGCTCTAAGCACCACTGAATACCGGTGTAG
ATGCAATTTAAGCACTAGGTCAAGTTTTTCTTGAATATTTGTGATGACCT
TGCGCCCGTTGACGTTAATTTTCACAAAGATATTGCTTTTTCTGTGAGTT
TGAAATATAACTCACTCACGGTGAATCTCGTGCTTAAATATGGGTTAATA
ACTTGCAGCTTTCTCTTTTATAATGTAAGGTTATCGTGGTATGCAGCGAG
TAGAGAAAGTTATGAGCACCAGCATACAAAACATATCAGTTATGTTTTGT
GGTGA Coding sequence (CDS) from alignment at sc0000188_pilon:332787..338591- >XLOC_038318 ID=XLOC_038318|Name=XLOC_038318|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=996bp|location=Sequence derived from alignment at sc0000188_pilon:332787..338591- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCGACAACAAGCTGAAAAGTGGAAAAAAGATGCAGCGACAACAAG
CTGAAAAGTGGAAAAAAGGAAAATCTCAGAAAAAAGTTGGGCGTCCATTT
GCATTATCGGAACAAACAGAAAAGTATCTCGCTAGTAGCTTGGTGCAAGA
ATTGGCAAGATGGCGCTTGCCTTTGGAAACACGAGATTTATCGGGATTGG
TCCAGTTTTACGTTCGACGCCAACGCCTATTGGAAAATCTCAGAAAAAAG
TTGGGCGTCCATTTGCATTATCGGAACAAACAGAAAAGTATCTCGCTAGT
AGCTTGGTGCAAGAATTGGCAAGATGGCGCTTGCCTTTGGAAACACGAGA
TTTATCGGGATTGGTCCAGTTTTACGTTCGACGCCAACGCCTATTGAAAT
TCAGATTGTGGAAGGCCAGACCTTCAGACAACTGGGTGAGACGATTTGTT
CGGCGCCACAAACTTTCCTTTCGGAAAGCTGACAAGTTGAAGACCACTAG
GGCGTCCGTAACACATGACCAAATTGTAAACTATTGCAGGAACATAGCAG
AAGAGTTATTAGAAATTCAGATTGTGGAAGGCCAGACCTTCAGACAACTG
GGTGAGACGATTTGTTCGGCGCCACAAACTTTCCTTTCGGAAAGCTGACA
AGTTGAAGACCACTAGGGCGTCCGTAACACATGACCAAATTGTAAACTAT
TGCAGGAACATAGCAGAAGAGTTATTAGGTGTACCAAACAACTGCATTTT
TAACTTTGATGTGACCAATTTTGCCAACAACATTGGGTGTACCAAACAAC
TGCATTTTTAACTTTGATGTGACCAATTTTGCCAACAACATTGGGTTATC
GTGGTATGCAGCGAGTAGAGAAAGTTATGAGCACCAGCATACAAAACATA
TCAGTTATGTTTTGTGGTGAGTTATCGTGGTATGCAGCGAGTAGAGAAAG
TTATGAGCACCAGCATACAAAACATATCAGTTATGTTTTGTGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000188_pilon | genome | sc0000188_pilon:332787..338591 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 424-498:76 |
| Aaloc | 367-420:625 |
| Aaloc | 199-363:1118 |
| Aaloc | 37-198:1592 |
| Aaloc | 1-33:5806 |
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