XLOC_038310 (mRNA) -

Overview
NameXLOC_038310
Unique NameXLOC_038310
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000236_pilon:23969..24581+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038310 ID=XLOC_038310|Name=XLOC_038310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=613bp|location=Sequence derived from alignment at sc0000236_pilon:23969..24581+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACATCAAGGAAGCATTTTTCAATAAAGCACTATCACCTGTAGAACG TATCCATTTGATTTGGCAAACCAtttttttCCTACGTATTTGGAGACTTT GGCTGAAGGCAAACACCTACAACGAACAGGATCATTTCATCACGCAAAAC GCATATGTTTGTACCGAGCTTAACGGCCATTTGCTCATCAACCTTGTCCA CAATGTCATCACTGGTAAATTCCCAAAAGAAGCTCTCCGTGTTTGGACAT GTGGATCACAATCTTGTGAGCAAACCTTTCGATTGCTACGTTCAATGACT TCCACGTTCTCAACTATCGTAAACTTTTCCATGAAAGGTAAGTGTGACTT TATTAGCCCAAAATGatttatctgaaaaaaaaatgctaTCTTCATGTTAT TGTGTACATCCTTATACTTTCCACATACAATTCAGAATTTCAGTTCTCTG TTTCTACAGCAAAGTCAAATTTGGCTCTAACTCTAAAACTTATCTTTTAG GAATCCTTGAACGAATGCACAAGCTACATTACCTATCTACGGTTGAAGCA TCAGAAGAAATCATCTTCCCTAGAGTTAAACGTAGACTCTTGCAAACAAG AGAGGAAACTGAG

Coding sequence (CDS) from alignment at sc0000236_pilon:23969..24581+

>XLOC_038310 ID=XLOC_038310|Name=XLOC_038310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000236_pilon:23969..24581+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACATCAAGGAAGCATTTTTCAATAAAGCACTATCACCTGTAGAACG
TATCCATTTGATTTGGCAAACCAtttttttCCTACGTATTTGGAGACTTT
GGCTGAAGGCAAACACCTACAACGAACAGGATCATTTCATCACGCAAAAC
GCATATGTTTGTACCGAGCTTAACGGCCATTTGCTCATCAACCTTGTCCA
CAATGTCATCACTGGTAAATTCCCAAAAGAAGCTCTCCGTGTTTGGACAT
GTGGATCACAATCTTGTGAGCAAACCTTTCGATTGCTACGTTCAATGACT
TCCACGTTCTCAACTATCGTAAACTTTTCCATGAAAGAGAAACATCAAGG
AAGCATTTTTCAATAAAGCACTATCACCTGTAGAACGTATCCATTTGATT
TGGCAAACCAtttttttCCTACGTATTTGGAGACTTTGGCTGAAGGCAAA
CACCTACAACGAACAGGATCATTTCATCACGCAAAACGCATATGTTTGTA
CCGAGCTTAACGGCCATTTGCTCATCAACCTTGTCCACAATGTCATCACT
GGTAAATTCCCAAAAGAAGCTCTCCGTGTTTGGACATGTGGATCACAATC
TTGTGAGCAAACCTTTCGATTGCTACGTTCAATGACTTCCACGTTCTCAA
CTATCGTAAACTTTTCCATGAAAGGAATCCTTGAACGAATGCACAAGCTA
CATTACCTATCTACGGTTGAAGCATCAGAAGAAATCATCTTCCCTAGAGT
TAAACGTAGACTCTTGCAAACAAGAGAGGAAACTGAGGAATCCTTGAACG
AATGCACAAGCTACATTACCTATCTACGGTTGAAGCATCAGAAGAAATCA
TCTTCCCTAGAGTTAAACGTAGACTCTTGCAAACAAGAGAGGAAACTGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038310XLOC_038310-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000236_pilongenomesc0000236_pilon:23969..24581 +
Properties
Property NameValue
Aaloc340-450:503
Aaloc1-336:1