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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000012_pilon:1885761..1889496+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038275 ID=XLOC_038275|Name=XLOC_038275|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3736bp|location=Sequence derived from alignment at sc0000012_pilon:1885761..1889496+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACTTCAGTTTGGACGTTGCAGAGGAAGGATGCAGGACCAGAGATTGAG
AATCCCTTTTCACAGGATGAAAGTAGAAGGAGAAGgtattgaaaaattta
ttttttgttccacTCAACCTGAAAATAATCTTATTTTACTGTCCATTATT
ATACCACTCGATATTCCGGAACATCTTATTCATGCATGGCACTCCAAAAA
TGTCATCCTCTCACATATTGCTAAATATGCTTCGTAGGACTTTAGACATG
CTATTCTAATATTGCTACCTGCTCAGATTTGTGAATGTTTTGTTAAACTG
TAGAATATATCTTTTTACCATACTAGATTTCAGAACAATTTTATCGTTTT
AGATACGATTGCAATACGACGAGCGCGGAATGTGTTATTGGTCACTGCTA
GCTTGTGTTTGGTCACTTTCATCACATTAGGTGTCTGTTTCTTGGATGTA
CCTAAAATTGTAAGGTAAGTGGATATTTACAGTTTCCAGTCTTATTTCAA
CGTTGTTCGTCAGTTGGATTACGTCATTGGTTGTAGAATacattcatttt
gttttataagcatacctaGGCTCTGTTTCGGTAGAAAATATGCATAATGC
TAAGCAAACCTTCAAGCTGAAATGCTAAAATAATCGTGCAGCTTAgatca
tatttttaaaaacatacacATTTGGAGGCTGTCAGCAATGTTTTTGACTA
ATGACTAGCATATAAATAAGTataaattaaggctgaaaatgagattttgt
taAGCACATTTGAGCCTCGacccgattttcccgtatgcttataaaaccaA
ATGAGTGAATTCTCCCAGTTTATTTCTCCataaacatataaacgactgga
catccatctcctttgtctttttgtagaaaaggctgctagcttcgttgccg
cctcgttaaaagcataaaatgaaacaatagattttgatgatataccacta
gggaataccttgctaacaacgtcaaaacttcgacaaaagtctctgttgtt
ctactcttctcaagtcgtttatctatatcataacaaagataacagaggca
aaatcatcgtcagcttgtcaaaactccgactaatatttctaaattttgac
ttaaaagtgtctaattattttagagagtgtcacattctaatttcgatttt
cttgcgaaacaggctctcaactttggcaagctatttttttcaagtcataa
aaaaaattatttgagtgacaaaagggattcaaaagtatacacgcagttga
aattctgcattttagagttgaaaatgttgataaaatatattgcaaacttg
tgaaaaaattcgaaaataatttttttgtacattaggagtaatgttcaagc
tctatcaatccttttacctaaataattcaaagaaataaaattatgacgga
atattgtcggatttttcgtaccaattttgaaatacaagcggcaacgaagc
tcgcttcaaagagacaataaaagatagacgtccagtcgtttatatgttca
tgatttcTCAATTATGAcaattgcattttttttttgagacagactttaag
ttGAATTGTAACCAAATAACCAGTTCTCGAACAattacgttttttttatt
ttcagcgaAGATGAGACTACGTTGAACACGCAGTCGCCTGTCTCAGGTAa
gacgaaaaatattttcgattgCAAAGGAGGTCAAGTGGTATCTCGTCCTA
CCACCTTTTAACTTTTCATGCGTTTTACTGTCTCAATCTTCAACATCACC
AAACTTACCGAATTTTCTTTGGTCATAACATAAACACACGCAAAAATGAA
TCAAGGTGGTATTTGCTAGGCTGCTAACATTCTTCTTTAATATGTTTTCG
TAgagcgaaaactttttcaagGATACTGCACTGCGTAGTCAAAGGAACCA
ATGAACTAGCAATCACTTTCTTATTTTGTAGATAACAGGTGGCCAAGACG
AAACGTCAAACATTTGTCTTTCTTATGGAATGATCACGTCTACACTCAGC
GTGTGAAAGACATCAAAAAGGTTTTGGAGAAGAAGTTGGAAACAGAGAGT
GAACCGATTTACTTGTTGTCGGTGACCAAGGATAGTTCAGTTGTGATGAT
GGCTATGAAAGCTGGTTGGAAACGAGCATGCCATCGCCATCCTGTACATC
TAAAGCTAGAGGTTTTGGAAGGTGAAATGTATTTCAAATCTCACGAAATG
AAGAATACGATTCACATGAAGCCTGGTGACGAAATGGTCATTCCAAAATG
GCAGCCTCATTACGAAGGTGTACAAGGACGTAGAACAGTTTTTGTAATTA
TCACACTCTCACCAAATTGTCCACCTgacaaaattgttgaaatgTTAAAT
GCTGACGAATGTGATTCTGAAAAGAATCCTCCGTTGACGTTCCCTCCTAT
TCATGAGATGGACCAGCCTGTTGACAACCAGCTCCCCGACACGTGGTCAG
CCACCATTGTCCTGCATCCGTTTAGTGAAGAACAAGGGACTGGACCCGAA
CgagattttcctttctttcaacTCAGTCATGGTCAGATGACCTATGATTA
TCAAAAAGGTGAAATGTTGATTTATGTAAAGGGATGTCTTTACGGTGAAT
GGTGGTTTAATGTGACCACGCATGCTACGTTCGTGGCCAGAAATTCGTCA
ATGCAGTGGAAAAAGATCGATTTGGGATGGACATTACCGGGCAAGAATTG
GATTGATCCAGAAGACAAATACATCGGACATTCTCAACTGAATTGGATGA
ATGATGAAGTTGACGTTGATTggtggaaaaaaaattacaaaaatacctCC
ACCTGGACATGGTTCGATCGGAATAATGACGGTTTCCCGTTTCGGATTAT
GTTTTCCGCTCCACCCAGAAGCAACTTGAAAGGCGAACCCGATAATTTGG
CGTTCTTTCAAATGTACTCATTCTCGTTCATCGTCAACGCAAAACCAGAG
CCAATCCACCACTCACGACTTCATATCATGGATATCGGAAAAATCGGATT
AACATGTGGTAATCCCGATAATTTCCAAGTTTTCAACTGGACCAATCACT
TTTCAGTATCTGCTCACATGATTCCAGTAGATTACCCGCACAACCCGTAC
CCAACCAAAGTGTACTATCGCTGGAATGACGACGAAGAATACACAGGCGC
ACCTTTTGACCGCTCCCAGTCTACCATCTTTTATCACGATTACAACCGTT
TCGAACGAATGGAAGGAATAAGAGCAGATTTATTTGGCCATTGGAATAGC
ACTACCAAACCTCGTCCAGGGGTAGGCTTTCTTTTGAAGACAGCAATCGA
TAGTCGGCAGACAGAATGTTCACAAATGTTTGCTGGTGAAATGCCGATCG
CCCAACAACCGCCATGGTGGCCACAACTCGGTCAAGCAAACATCCAAGCG
ATCATCAGAAGACCGGAAAATGCTTCAGACGAATGGAGATCACCCCTCAC
CGGAAGCGATCGAACCGTCGCTATTATCCGCGTCACTTTTCCCTCTCATT
TACCGAATTTTCCGAACTCAACTAGCCTCTGGACCTGGTACGATTATACC
GATTTCATTCAGGCTAAAGCTGCAGCCCGTCCTATCGTGTTCATGCAATC
TGCTCCTAAATTTGAATTGGGAACTAGTCTTGCGTTGGcggatttttttg
attttcatgttTTACCAGACACTGTTCATTCTCGGACACCCCTTGATTTA
GAAAACTTGAACACATTTTGTAATATCACTCTTTGA Coding sequence (CDS) from alignment at sc0000012_pilon:1885761..1889496+ >XLOC_038275 ID=XLOC_038275|Name=XLOC_038275|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4086bp|location=Sequence derived from alignment at sc0000012_pilon:1885761..1889496+ (Clytia hemisphaerica_ch_hm2_pilon)
GAACTTCAGTTTGGACGTTGCAGAGGAAGGATGCAGGACCAGAGATTGAG
AATCCCTTTTCACAGGATGAAAGTAGAAGGAGAAGGAACTTCAGTTTGGA
CGTTGCAGAGGAAGGATGCAGGACCAGAGATTGAGAATCCCTTTTCACAG
GATGAAAGTAGAAGGAGAAGATACGATTGCAATACGACGAGCGCGGAATG
TGTTATTGGTCACTGCTAGCTTGTGTTTGGTCACTTTCATCACATTAGGT
GTCTGTTTCTTGGATGTACCTAAAATTGTAAGATACGATTGCAATACGAC
GAGCGCGGAATGTGTTATTGGTCACTGCTAGCTTGTGTTTGGTCACTTTC
ATCACATTAGGTGTCTGTTTCTTGGATGTACCTAAAATTGTAAGcgaAGA
TGAGACTACGTTGAACACGCAGTCGCCTGTCTCAGcgaAGATGAGACTAC
GTTGAACACGCAGTCGCCTGTCTCAGATAACAGGTGGCCAAGACGAAACG
TCAAACATTTGTCTTTCTTATGGAATGATCACGTCTACACTCAGCGTGTG
AAAGACATCAAAAAGGTTTTGGAGAAGAAGTTGGAAACAGAGAGTGAACC
GATTTACTTGTTGTCGGTGACCAAGGATAGTTCAGTTGTGATGATGGCTA
TGAAAGCTGGTTGGAAACGAGCATGCCATCGCCATCCTGTACATCTAAAG
CTAGAGGTTTTGGAAGGTGAAATGTATTTCAAATCTCACGAAATGAAGAA
TACGATTCACATGAAGCCTGGTGACGAAATGGTCATTCCAAAATGGCAGC
CTCATTACGAAGGTGTACAAGGACGTAGAACAGTTTTTGTAATTATCACA
CTCTCACCAAATTGTCCACCTgacaaaattgttgaaatgTTAAATGCTGA
CGAATGTGATTCTGAAAAGAATCCTCCGTTGACGTTCCCTCCTATTCATG
AGATGGACCAGCCTGTTGACAACCAGCTCCCCGACACGTGGTCAGCCACC
ATTGTCCTGCATCCGTTTAGTGAAGAACAAGGGACTGGACCCGAACgaga
ttttcctttctttcaacTCAGTCATGGTCAGATGACCTATGATTATCAAA
AAGGTGAAATGTTGATTTATGTAAAGGGATGTCTTTACGGTGAATGGTGG
TTTAATGTGACCACGCATGCTACGTTCGTGGCCAGAAATTCGTCAATGCA
GTGGAAAAAGATCGATTTGGGATGGACATTACCGGGCAAGAATTGGATTG
ATCCAGAAGACAAATACATCGGACATTCTCAACTGAATTGGATGAATGAT
GAAGTTGACGTTGATTggtggaaaaaaaattacaaaaatacctCCACCTG
GACATGGTTCGATCGGAATAATGACGGTTTCCCGTTTCGGATTATGTTTT
CCGCTCCACCCAGAAGCAACTTGAAAGGCGAACCCGATAATTTGGCGTTC
TTTCAAATGTACTCATTCTCGTTCATCGTCAACGCAAAACCAGAGCCAAT
CCACCACTCACGACTTCATATCATGGATATCGGAAAAATCGGATTAACAT
GTGGTAATCCCGATAATTTCCAAGTTTTCAACTGGACCAATCACTTTTCA
GTATCTGCTCACATGATTCCAGTAGATTACCCGCACAACCCGTACCCAAC
CAAAGTGTACTATCGCTGGAATGACGACGAAGAATACACAGGCGCACCTT
TTGACCGCTCCCAGTCTACCATCTTTTATCACGATTACAACCGTTTCGAA
CGAATGGAAGGAATAAGAGCAGATTTATTTGGCCATTGGAATAGCACTAC
CAAACCTCGTCCAGGGGTAGGCTTTCTTTTGAAGACAGCAATCGATAGTC
GGCAGACAGAATGTTCACAAATGTTTGCTGGTGAAATGCCGATCGCCCAA
CAACCGCCATGGTGGCCACAACTCGGTCAAGCAAACATCCAAGCGATCAT
CAGAAGACCGGAAAATGCTTCAGACGAATGGAGATCACCCCTCACCGGAA
GCGATCGAACCGTCGCTATTATCCGCGTCACTTTTCCCTCTCATTTACCG
AATTTTCCGAACTCAACTAGCCTCTGGACCTGGTACGATTATACCGATTT
CATTCAGGCTAAAGCTGCAGCCCGTCCTATCGTGTTCATGCAATCTGCTC
CTAAATTTGAATTGGGAACTAGTCTTGCGTTGGcggatttttttgatttt
catgttTTACCAGACACTGTTCATTCTCGGACACCCCTTGATTTAGAAAA
CTTGAACACATTTTGTAATATCACTCTTTGAATAACAGGTGGCCAAGACG
AAACGTCAAACATTTGTCTTTCTTATGGAATGATCACGTCTACACTCAGC
GTGTGAAAGACATCAAAAAGGTTTTGGAGAAGAAGTTGGAAACAGAGAGT
GAACCGATTTACTTGTTGTCGGTGACCAAGGATAGTTCAGTTGTGATGAT
GGCTATGAAAGCTGGTTGGAAACGAGCATGCCATCGCCATCCTGTACATC
TAAAGCTAGAGGTTTTGGAAGGTGAAATGTATTTCAAATCTCACGAAATG
AAGAATACGATTCACATGAAGCCTGGTGACGAAATGGTCATTCCAAAATG
GCAGCCTCATTACGAAGGTGTACAAGGACGTAGAACAGTTTTTGTAATTA
TCACACTCTCACCAAATTGTCCACCTgacaaaattgttgaaatgTTAAAT
GCTGACGAATGTGATTCTGAAAAGAATCCTCCGTTGACGTTCCCTCCTAT
TCATGAGATGGACCAGCCTGTTGACAACCAGCTCCCCGACACGTGGTCAG
CCACCATTGTCCTGCATCCGTTTAGTGAAGAACAAGGGACTGGACCCGAA
CgagattttcctttctttcaacTCAGTCATGGTCAGATGACCTATGATTA
TCAAAAAGGTGAAATGTTGATTTATGTAAAGGGATGTCTTTACGGTGAAT
GGTGGTTTAATGTGACCACGCATGCTACGTTCGTGGCCAGAAATTCGTCA
ATGCAGTGGAAAAAGATCGATTTGGGATGGACATTACCGGGCAAGAATTG
GATTGATCCAGAAGACAAATACATCGGACATTCTCAACTGAATTGGATGA
ATGATGAAGTTGACGTTGATTggtggaaaaaaaattacaaaaatacctCC
ACCTGGACATGGTTCGATCGGAATAATGACGGTTTCCCGTTTCGGATTAT
GTTTTCCGCTCCACCCAGAAGCAACTTGAAAGGCGAACCCGATAATTTGG
CGTTCTTTCAAATGTACTCATTCTCGTTCATCGTCAACGCAAAACCAGAG
CCAATCCACCACTCACGACTTCATATCATGGATATCGGAAAAATCGGATT
AACATGTGGTAATCCCGATAATTTCCAAGTTTTCAACTGGACCAATCACT
TTTCAGTATCTGCTCACATGATTCCAGTAGATTACCCGCACAACCCGTAC
CCAACCAAAGTGTACTATCGCTGGAATGACGACGAAGAATACACAGGCGC
ACCTTTTGACCGCTCCCAGTCTACCATCTTTTATCACGATTACAACCGTT
TCGAACGAATGGAAGGAATAAGAGCAGATTTATTTGGCCATTGGAATAGC
ACTACCAAACCTCGTCCAGGGGTAGGCTTTCTTTTGAAGACAGCAATCGA
TAGTCGGCAGACAGAATGTTCACAAATGTTTGCTGGTGAAATGCCGATCG
CCCAACAACCGCCATGGTGGCCACAACTCGGTCAAGCAAACATCCAAGCG
ATCATCAGAAGACCGGAAAATGCTTCAGACGAATGGAGATCACCCCTCAC
CGGAAGCGATCGAACCGTCGCTATTATCCGCGTCACTTTTCCCTCTCATT
TACCGAATTTTCCGAACTCAACTAGCCTCTGGACCTGGTACGATTATACC
GATTTCATTCAGGCTAAAGCTGCAGCCCGTCCTATCGTGTTCATGCAATC
TGCTCCTAAATTTGAATTGGGAACTAGTCTTGCGTTGGcggatttttttg
attttcatgttTTACCAGACACTGTTCATTCTCGGACACCCCTTGATTTA
GAAAACTTGAACACATTTTGTAATATCACTCTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012_pilon | genome | sc0000012_pilon:1885761..1889496 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 241-2043:1934 |
| Aaloc | 199-237:1607 |
| Aaloc | 88-195:355 |
| Aaloc | 1-84:1 |
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