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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000012_pilon:1922377..1926649- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038259 ID=XLOC_038259|Name=XLOC_038259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4273bp|location=Sequence derived from alignment at sc0000012_pilon:1922377..1926649- (Clytia hemisphaerica_ch_hm2_pilon)
TCCACAATGAGCACAGAAAAGAAGAAAGGGACGAATATAAATCCTGTTGT
GAAATCACAGAAGAAGATCACTGGCAAAAAAGATGATTTCAGTAATTCGA
AAGAGTGGAAAAGTGTTGTCAGTGGATGCACAAATATCTTTAATGGTAAG
CAGATTTCTATTCGGTTTTTTTTTTAGGAAACGTGTTGAAATAATAAAGG
CACTATAATTTATGTAAGGGTAGATAAGTTTCTTCTTCGGGGATATCGGG
TAATAGTTAGAAGAATTATTATTTTTGATGATTTTATGACATGTCAATTT
TATCACTAAAACTGAGCCAGAATGAAAGGTTCTTTTCACAATGAGGAATG
TGTCATTTTGATGTTCTGAAGATCCAACCCTCCCTGGCCGTAACGAAATA
CAAGTACAAATACAAATAGCCCGAAAAGGTGACTCTTATTAGGGAAAAAC
ACATTGCAAAGCTTTGTTGTTTATCTGCTTTTTATTTTGTGTCTCAGTAA
AATCTTATCTACTCCTACAGTTAGACCACATTGTACCTCTCTTTTCAACA
AGAAAGGTATACTTTCCCCTCTCTGACAAACAAAGACATTTTTTGATTCC
CCATTAGAACCAGCAAGTGGTTTTCATTGTAAGATGTGAAGTACAGTATT
TATTATTCATTAACAAAAAAATGAGAGGCAGTTCTTAAACAAATATTCAT
TTTCCTTTTTTCAACTTTACTGGTGGTTTTATTCAAAGTTTATATATTAA
TCTCAGTCCTATATCATTGTAACAGATATATTCGATAATTAGCAGGGGCT
ATTTTTTGAAGCTTAGGGGTCGTGAAAACTTGATGAAGTTTACAAATGGT
GGCACAACGGTGTACTGTACCAAAAGAATGTCGATAAACTGTGAAAGGAT
TGCAAGATTTCCACTAAAACTTGGTGACTTGACCTAAACTAGGGAGGCAA
ATTTCACGTGGATACCTAGTAATTTAGGACTTTTTAAGCAGTCTTTCAAT
TCTTTTCACGGGGTTCATTTTTGAACTAAACGAAACACTGAAGGAACTGG
GTTTAAACTTTGGAATCCCCTGGTTTGAGGTGCTTATATCGCTCTTTCTT
TAATTGGAGGCGATTGCAGGGAAAAGTTTGTCAAAAGAAACGCGAGGGAA
GCGAGTGCGAAACTTTCCGAATAATTTTCCCTCTTTTTTGCAACTACCAT
TTATAGGCTTAAAAAACAAGTGCAAAAAATAGGGATATTAGTACCACGCA
CGCTATTGAGGTATCCATAAAACTAAAAAAACGAGTCATCCGTAAAAGAA
AACAAGCTGTTAGTGTTACATTTAGCTACAAAAACATAAAGCTATGGAGA
ATTTGGTGAATATTATGGAAACGGCGCTCCTTCACAAACGTGATCGACAA
AACATGTTTGGTGTTGACAATACGAAGCTCTTACTCACCATCTTTCAAGG
TTCATGGAACTGCCCTCCATTATTTTTGAATATATAGCTTCCATGGCGTC
ACAATGACAATTATGGGCATGTTCTTTTTGACGTTACGTCACAAAATAAA
AATAAGACTTTTGAATAAAAAGCTACCAAAAACCAGATTTACGAGCTAAT
AAATTTGAATTATGTTTGAAAACGAGAAATATTTTAGCGATGAACGGATA
ATAAACCATTTATTTGGACGCAGTCTCATCCAATATGAAAAATATTGGAT
TAGACTTTGTCCAATAACTGCTTGATAGTATTATTCTTATGTGAATCTGA
AAAAATCTTCAGAGGGTCGCTATACAATTCCATTATAGTGCTACCACTGT
ACTCTTAGGTTCCAAATAAAGGGGGGGTTGGAAAATTTTTGAGATTTTGA
TAAACGGGGGGGGGGCCTAATTGCCGGGGTGGTTAGAAATTGTATTTTTG
TAAACCCAAAAATAAGGTAACTATAGGCTAAATCAGGCTATTTAGAGCAA
AATAAGGGGCCTTCTCTTTGACAGCTGAAAATTATTCTTAAAAACTAATA
AACGGGGGGTTCTAATAAGGTCCGTGGGGTTGGAAAATTTTCGAAAAATT
AACAAGCGTTTATTTGGAACCTAAGAGTAATTATCTGCAGTAATTCATGA
TGTTATTATAAATTCAATTCTATTCATCTTCTCTGCTTCACTTCAGGCAA
GAAGCTTTCCAACCACGATTTTGTGAAAATGTTTGAAACCATTCGCTCAA
TTTCTTCTTCGGCTGACGTAGGTTTAGCTAACGAAAGTGTCTCCCGTAAC
TACGAGGACGCCATTTTGTCACGTGGGATGATCATATTGAGAGAAGACAT
CAAAGAAAAACCAGGTTTGCTCTCTGTACAATCGTAATTTCTTTGGATTC
GCTATTTACACCCATTCCGTTTATTCACAATGATCAACGTCACACCCGAG
TTTGCCTGAATGTCCCCAAATTTCACAGGAAAAATTGTTCCAACCTTGTT
TTTAGTCTCAAGGTCATCACAATTTCAATATCCCCCATTAACTTAATTAA
AAAAAAATTAAAAAAAAGCTTCTTCCTGTATGTTTTCTGTTGTATTATAG
GTCATGCGCTGCTTCACAAATTAGGTGAAGTCTGGACCAATTTCTATCAG
AACATTTTACCAACACTTCAAGCCTTATTCTGTTCCATTCCTATGAAAGT
ACGTGAAGTAACTCTCTTGGCGTTCAGAGATAATGTTTTATTGAAACTGA
AGATTGAAGAAGCCCTGAATATCAATGATCACCATATACCCAAATCCATC
ATGCAAATGTTTTGTGTTCTTTTTCAAGTAAGTATTAGGTTTGTTTTTCA
AGGTCATTTACTATACTATCGTTTATCAGAAAAAAATTCGTTGACGAGAA
TTTTCATCACTTTTTCGAGGTGCGATATTACGTTCAATTGCTCACAAGTC
AAAACTTTATACCTTATCGGCCCTTTTTACACCGGCGCCCTTATTGGCGT
TATTTTTGGGCTCGTGGTGTAATAAGGGCCGACGTTAAAAGGGCTGGCGT
AAAAAGGGTCAATATTTTGCAATTTTAACCTAAAAGCGGTGTTAATTTTT
TATCATTATTTCTCAATTTAAAGGATTTTAGGTATGATTCGAAGACGAAA
ATTATCCATTGTTTTACTCCATATTTAAAACTTCAGTGAAATATTTAATA
TATTTAAAAATCAGTGATTTTCGATGGAGTTTTCAACAGTTTACTACTTA
AAAAAGACATTTTAATGTAAATTTTAGTCATTATTTACTAATTTGAAGCT
TAAGTAGCCATTTTTACAAATTTTGGCGTAAAGTAGTCTAATTTTTCGAT
AGGCATCACGAGACCCAGAGGAACGCGAGCGGAAGAATTTTGATGAACTA
GAACGATTGATGGCTCGTGTGATCAATCCCTTCTTGGGAAGTAAAGGTCT
ACTTACACCACCACAAAGAAGCCACCATCATAATAGCCAACATTCTCATC
ATAAGAAACAAGACAAGTTGACACCCTCCTCTTCCATAGGATCCGGAGCA
AGTACACCGGAAACCGAAGGTACCATTCTTCTTTCTTTTTGTCTATCGAT
AAAGTACCATAAAAAAACCTTCTCAGGTCGAAACATCTAAAACCTCAAAA
TATTCTGCTCAGCTTTTGAATCTGTTTGAATCATACTTCATACTCTTTTA
CGCATTTTTTTGTAAGCAACTCCAATTTTCGGGTCAGCCTTGGGGTTGCT
TAGCATTCTAGCTCATTTTCTGAAAAAAAACTGCTTTGACCACCCCTGAT
ATTATACCATATTTATACATTAAATCAAGGGCTATCGTTTGCCATGGTTA
GATTATCTAAAAAGCTTATACTTTACGATATAGCGATATTAATTGGCAAA
TTTGAGCCATCAAGCCCTAGCAACCTAGTTGCTTAAAAAAACAATATTTT
TCATTATAATTAAACAGACAAGTATTAAAGAAAAAAATTTTTTTAGCCTT
GCGTCTGAAAATATGACAGTGGTAACAAATTTCTAGTTCCAGCAAAGTAT
CTAGACGTTCATAGTGAACTCTAGTTCCTGGTATATATAAGGCTTTCATT
TCTGGTAATTATCATGTGTTGAATATTTTTCTTGTCAGTGAAATCGAATC
AATGTTCTGCAGCCGATGATAATGATGATTTTGAAGAACTCCTGAACTTC
CGACGACAAAATCTTAACCGGTTCGCTGGCGGCCCACAACGTCTATCAGC
TGTCGATGAACAAAAAGGCGGAATTTCTGAATCTTTGGCAAGTCTCATCG
CGGATGGGTTTGAACTTGGTTGA Coding sequence (CDS) from alignment at sc0000012_pilon:1922377..1926649- >XLOC_038259 ID=XLOC_038259|Name=XLOC_038259|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1884bp|location=Sequence derived from alignment at sc0000012_pilon:1922377..1926649- (Clytia hemisphaerica_ch_hm2_pilon)
TCCACAATGAGCACAGAAAAGAAGAAAGGGACGAATATAAATCCTGTTGT
GAAATCACAGAAGAAGATCACTGGCAAAAAAGATGATTTCAGTAATTCGA
AAGAGTGGAAAAGTGTTGTCAGTGGATGCACAAATATCTTTAATGTCCAC
AATGAGCACAGAAAAGAAGAAAGGGACGAATATAAATCCTGTTGTGAAAT
CACAGAAGAAGATCACTGGCAAAAAAGATGATTTCAGTAATTCGAAAGAG
TGGAAAAGTGTTGTCAGTGGATGCACAAATATCTTTAATGGCAAGAAGCT
TTCCAACCACGATTTTGTGAAAATGTTTGAAACCATTCGCTCAATTTCTT
CTTCGGCTGACGTAGGTTTAGCTAACGAAAGTGTCTCCCGTAACTACGAG
GACGCCATTTTGTCACGTGGGATGATCATATTGAGAGAAGACATCAAAGA
AAAACCAGGCAAGAAGCTTTCCAACCACGATTTTGTGAAAATGTTTGAAA
CCATTCGCTCAATTTCTTCTTCGGCTGACGTAGGTTTAGCTAACGAAAGT
GTCTCCCGTAACTACGAGGACGCCATTTTGTCACGTGGGATGATCATATT
GAGAGAAGACATCAAAGAAAAACCAGGTCATGCGCTGCTTCACAAATTAG
GTGAAGTCTGGACCAATTTCTATCAGAACATTTTACCAACACTTCAAGCC
TTATTCTGTTCCATTCCTATGAAAGTACGTGAAGTAACTCTCTTGGCGTT
CAGAGATAATGTTTTATTGAAACTGAAGATTGAAGAAGCCCTGAATATCA
ATGATCACCATATACCCAAATCCATCATGCAAATGTTTTGTGTTCTTTTT
CAAGTCATGCGCTGCTTCACAAATTAGGTGAAGTCTGGACCAATTTCTAT
CAGAACATTTTACCAACACTTCAAGCCTTATTCTGTTCCATTCCTATGAA
AGTACGTGAAGTAACTCTCTTGGCGTTCAGAGATAATGTTTTATTGAAAC
TGAAGATTGAAGAAGCCCTGAATATCAATGATCACCATATACCCAAATCC
ATCATGCAAATGTTTTGTGTTCTTTTTCAAGCATCACGAGACCCAGAGGA
ACGCGAGCGGAAGAATTTTGATGAACTAGAACGATTGATGGCTCGTGTGA
TCAATCCCTTCTTGGGAAGTAAAGGTCTACTTACACCACCACAAAGAAGC
CACCATCATAATAGCCAACATTCTCATCATAAGAAACAAGACAAGTTGAC
ACCCTCCTCTTCCATAGGATCCGGAGCAAGTACACCGGAAACCGAAGGCA
TCACGAGACCCAGAGGAACGCGAGCGGAAGAATTTTGATGAACTAGAACG
ATTGATGGCTCGTGTGATCAATCCCTTCTTGGGAAGTAAAGGTCTACTTA
CACCACCACAAAGAAGCCACCATCATAATAGCCAACATTCTCATCATAAG
AAACAAGACAAGTTGACACCCTCCTCTTCCATAGGATCCGGAGCAAGTAC
ACCGGAAACCGAAGTGAAATCGAATCAATGTTCTGCAGCCGATGATAATG
ATGATTTTGAAGAACTCCTGAACTTCCGACGACAAAATCTTAACCGGTTC
GCTGGCGGCCCACAACGTCTATCAGCTGTCGATGAACAAAAAGGCGGAAT
TTCTGAATCTTTGGCAAGTCTCATCGCGGATGGGTTTGAACTTGGTTGAT
GAAATCGAATCAATGTTCTGCAGCCGATGATAATGATGATTTTGAAGAAC
TCCTGAACTTCCGACGACAAAATCTTAACCGGTTCGCTGGCGGCCCACAA
CGTCTATCAGCTGTCGATGAACAAAAAGGCGGAATTTCTGAATCTTTGGC
AAGTCTCATCGCGGATGGGTTTGAACTTGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012_pilon | genome | sc0000012_pilon:1922377..1926649 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 760-942:184 |
| Aaloc | 541-756:972 |
| Aaloc | 316-540:1722 |
| Aaloc | 148-312:2126 |
| Aaloc | 1-144:4274 |
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