XLOC_038238.2 (mRNA) -

Overview
NameXLOC_038238.2
Unique NameXLOC_038238.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000122_pilon:693897..694742+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038238.2 ID=XLOC_038238.2|Name=XLOC_038238.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=846bp|location=Sequence derived from alignment at sc0000122_pilon:693897..694742+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGCCAGATCATGATCCTCTGTCTGACAATTTCAATGTAAGTCAGAGGAG ATTGAAATCCAACATCAGAAAACTGAAGTCTACAGGAATTTTGAATGATT ATCACGAAGTATTTAAGGAGTACGAAAGCGagaaaatcattgaaaaggTT CCTGTGAATGAGGTTTACAAAGAACGTGGGACAGTACACTACCTTCCGCA TAGAGCTGTTGTGCGCGAAGACAAACTCACCACAAAGATTCGACCTGTTT TTGATGCTTCTTGCAAGATCAATGGACCTTCTTTGAACGAGTGTTTGTAT TCCGGACCGAATCTTTTGTCCAAGATCTTTGATGTTCTTTTTAGATTTCG TTTGAATAAGATTGGGATTGTTGCTGATATTAAGAAAGCCTTTCTAAACA TAAGTATAGCTCCTGAGCAtcgagattttttgaggttcaTTTGGGAGGAA AATGACGAACAAGTTATCTACCGCTTTAGAAGACTTGTCATGGGTTTGAC TTGTAGTCCTTTCCTTTTGAATGGAACTGTACGGCAGCATCTTCAAAACG AAAAAGGTAAGTATACAGCTGATGTTTTAGATCGATTAGGTGAAGATTTG TATGTTGATGACATTACGAGTGGTTGTGAGTCTGTGGAAGAAGGGAGAAA GTTTCAGAAGGTTGCGAATAGTGTGATGAAAGATGCTGGATTTGATTTGA GAAAGTGGATGACGAATGATAAGCGATTGCAGAGATTTTTTGATGGGGGA AGTGAGAGTGACATGGGTGATGCTGAAGGTGATGATGTGACTTTTGCGAA AACTGTTACAGGGATGTCGGTTGAGAATGGTTATCACAAAGTTTTA

Coding sequence (CDS) from alignment at sc0000122_pilon:693897..694742+

>XLOC_038238.2 ID=XLOC_038238.2|Name=XLOC_038238.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1692bp|location=Sequence derived from alignment at sc0000122_pilon:693897..694742+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGCCAGATCATGATCCTCTGTCTGACAATTTCAATGTAAGTCAGAGGAG
ATTGAAATCCAACATCAGAAAACTGAAGTCTACAGGAATTTTGAATGATT
ATCACGAAGTATTTAAGGAGTACGAAAGCGagaaaatcattgaaaaggTT
CCTGTGAATGAGGTTTACAAAGAACGTGGGACAGTACACTACCTTCCGCA
TAGAGCTGTTGTGCGCGAAGACAAACTCACCACAAAGATTCGACCTGTTT
TTGATGCTTCTTGCAAGATCAATGGACCTTCTTTGAACGAGTGTTTGTAT
TCCGGACCGAATCTTTTGTCCAAGATCTTTGATGTTCTTTTTAGATTTCG
TTTGAATAAGATTGGGATTGTTGCTGATATTAAGAAAGCCTTTCTAAACA
TAAGTATAGCTCCTGAGCAtcgagattttttgaggttcaTTTGGGAGGAA
AATGACGAACAAGTTATCTACCGCTTTAGAAGACTTGTCATGGGTTTGAC
TTGTAGTCCTTTCCTTTTGAATGGAACTGTACGGCAGCATCTTCAAAACG
AAAAAGGTAAGTATACAGCTGATGTTTTAGATCGATTAGGTGAAGATTTG
TATGTTGATGACATTACGAGTGGTTGTGAGTCTGTGGAAGAAGGGAGAAA
GTTTCAGAAGGTTGCGAATAGTGTGATGAAAGATGCTGGATTTGATTTGA
GAAAGTGGATGACGAATGATAAGCGATTGCAGAGATTTTTTGATGGGGGA
AGTGAGAGTGACATGGGTGATGCTGAAGGTGATGATGTGACTTTTGCGAA
AACTGTTACAGGGATGTCGGTTGAGAATGGTTATCACAAAGTTTTAAAGC
CAGATCATGATCCTCTGTCTGACAATTTCAATGTAAGTCAGAGGAGATTG
AAATCCAACATCAGAAAACTGAAGTCTACAGGAATTTTGAATGATTATCA
CGAAGTATTTAAGGAGTACGAAAGCGagaaaatcattgaaaaggTTCCTG
TGAATGAGGTTTACAAAGAACGTGGGACAGTACACTACCTTCCGCATAGA
GCTGTTGTGCGCGAAGACAAACTCACCACAAAGATTCGACCTGTTTTTGA
TGCTTCTTGCAAGATCAATGGACCTTCTTTGAACGAGTGTTTGTATTCCG
GACCGAATCTTTTGTCCAAGATCTTTGATGTTCTTTTTAGATTTCGTTTG
AATAAGATTGGGATTGTTGCTGATATTAAGAAAGCCTTTCTAAACATAAG
TATAGCTCCTGAGCAtcgagattttttgaggttcaTTTGGGAGGAAAATG
ACGAACAAGTTATCTACCGCTTTAGAAGACTTGTCATGGGTTTGACTTGT
AGTCCTTTCCTTTTGAATGGAACTGTACGGCAGCATCTTCAAAACGAAAA
AGGTAAGTATACAGCTGATGTTTTAGATCGATTAGGTGAAGATTTGTATG
TTGATGACATTACGAGTGGTTGTGAGTCTGTGGAAGAAGGGAGAAAGTTT
CAGAAGGTTGCGAATAGTGTGATGAAAGATGCTGGATTTGATTTGAGAAA
GTGGATGACGAATGATAAGCGATTGCAGAGATTTTTTGATGGGGGAAGTG
AGAGTGACATGGGTGATGCTGAAGGTGATGATGTGACTTTTGCGAAAACT
GTTACAGGGATGTCGGTTGAGAATGGTTATCACAAAGTTTTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038238.2XLOC_038238.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122_pilongenomesc0000122_pilon:693897..694742 +
Properties
Property NameValue
Aaloc1-846:1