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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000143_pilon:506343..510412+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038216 ID=XLOC_038216|Name=XLOC_038216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4070bp|location=Sequence derived from alignment at sc0000143_pilon:506343..510412+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGGTGAAACAACTGTCGTCACCAGTCCTCGTCTTCATTTTCATCCT
CCTCTTTATCCAAAATAATCATGGTAAgtctaaaggcttggggacacgag
aagttttttcgcgttgatgcaatgcaacatgctctgtcccaccaacctga
aacgctttctcgtgtctccaccccatttttcttttaataacatttgtgct
tctctaACTTTTGTTctaatcagcgtgtcttttgggtattttccttattt
tttgtcccgtgagcatgttgcattgggctcttccagtaaatgtccgtaca
tggggggggggtggaggatatagcgtctgggggtagtgaaaaataatcaa
aatttgccttgtccgggggtaaattttgctctgtccgggggtaatttgag
ttgtccagggggtcaactgatgcttgtctgggAGGGGCAGGgggcaaaag
tcactttgtccgggggtaaatcattgaaaattgttcataatcaaaatttg
ccttgttcgGGGGTAAattttgctctgtccgggggtaatttgagttgtcc
agggggtcaactgatgcttgtctgggAGGGGCAGGgggcaaaagtcactt
tgtccgggggtaaatcattgaaaattgttatatcctctaacccccatatt
caaattcttTCTAAGCCTATTAtacaattttttggtaaaagtccATCTTA
GCCTAGGGGGCCTTTATTGAATTTATTCATATGAATTCCTTGATCCTATT
TGCTTTTCCATGTAAGAGGCAATCAAGGAGTTAGACGATTTTTTATTAGg
agtaaatcaaaattgaaaattccttTCACCtaagcttttttttcaaaaat
gaggTAAAATTTCGTTATGTTGAGGGTTCCTTGAAAGATTCCCGAAGATA
ATATTGTCTTCAAAATTCATCTGCATGTTCTTTCTTacctactttaatgg
gataaattttcgcggggattaaatttcgcggttgagctcatccgcgaact
tttaagatttcgcggggattaattttcgcggatgagggatttcctgattt
ttcgcggggatttaatttcgcggattggggtacaaattaaaatttttgaa
aagagtcaaaacattgaaataaaatttttccaggaaattaagaatttttt
tttcaagtaataagagggtgttttggaatagggcgaggtgatatgtatta
caactatcaaaagttgaatttgaacttccatggtgcggagctaaattttc
acagcctatttgggaaaaaatcttacatatccttttaaatgtttaatttc
aagtcagttggattaccctcttgcattgaaaagcttttaacaataagcga
tcactttagataaaaatttttccaataccgcttccaagtttgtaaatttg
tgaagaaaattttgaggaaaacgattttttgctaacaagcatatcgagga
tttgacctttttcgagggttgcctcatgtagaaaaaaataaataaaaaac
gataaaaatagaaatttcgcggattgcaaaaaaaattcaaatttttcgcg
ggaactaattttcgcggatgggcctttctcaaatttccaatgggaattat
tttcgcggatgacacccaaatccgcgaaatccgcgaaaattaatccccgc
gaaaatttatcccattaaagtaatagCCGatggggggattggaataagca
ggggttggaaaaatatacaaaacttaataagcgaggggggggttggaata
aaaatgtcctgggtagaaaatttttaaaaaggaggTTAATACTGcagatt
taaaacaaaagagggaactttcaaaaacattttcccGAAAAAAATTAACG
GGGGGTTGGAATAAGAATGTCCAGGATAGAAAATTTTGAAAAATTAATTA
GCAGAGGGGCGGCTATTAGGTACCAGAGAGTAAGCATTGTTTGAAATATT
TGGGGGGATTTTCTCAATGTAAATAAAAATGATATTTTTGTAAATTAAAA
GTTTGCACAATTTGAAAATTATTTTTCTCgcattttccaggGTCAGAGGT
GGACTCCGAAGAAGAGGCTGCTTCATTTCTTCTCCAGAAATCACTGATCA
AAGCACGAATGAAAATCAACAGACATGTTATCCATAGACGACAAGCGTTA
TATCATCATTTTGTTGAACTGGAGGACAACttttttgaggaaaacgatGC
AGACCCTGATAATGATGAGGATGGCGACGGTTGTGATGTAGACCGAGAGG
AAAACATTAGACTAGAAACAAGGAATCTTACATCTGATGCCATATCGGAT
TCCACGAAAAACGAATTCGAAAATCCTTTCGATGACGAAGATATAGAAGA
ATCAGGAGCTCATAGACCATCAGATGATCCCAATGTAGCCTACACAACAT
TGACAAGACAGAACGATGATAAAAGTATTGAAACAGGTTTAAAGGATGGA
CTGCAGGCTAAGGTACAACACCCTGTTCTAAAGAGAAACCATACAACAAA
CAATACGAAACGTCATCACAAAAATAATAACCAATCAACAACTGTTATAA
AAGACTTATCCACAAAACAGTTTATTCAGTCGAAAACGTATGAACCACGA
CTACGTGAAAATAGAAGTATTCAAAATGAACATGATccttttggaaaatt
gaaaaggAACACGACTTTTCCTAGATTCTTACCATCAGATAGAAGAAGAT
CGAACTCTACGCTTGGCACAGGCATCTCTGATAGCGAAaactcaaaaaca
acaaaaatacagGAATCAAAGCCAATGCTCCCTATAAATatcaatgttaa
aaaagactttaaatcaaataaaacacATGGAGACATAGACACAGACATAG
ATAATGAACAAGACTTACGCTTAACTAATAGACTGAAATCGAACGCGCAA
CTTCGCACACGCATAAATGCTATAAAAGATTCACACTTGACAAACCGATC
GAAATCGAACGGGCAACAGCGTACAGACATCGGTGTTTTAAAAGACCCAC
ACTTAACTAACCGATCGAAATCGAATGCGCAACTGCGTACAGGTATAGAC
GATAAACAAGTCTCACGGTTAACTAATACACTAAAATCGAAAGCGCAACT
GCGTACAGACATAAATGCTATAAACGGCCCAGTATTCGGCGACGAAATCA
TTCACCAAACATCAATTGCGCATGCTCCATGTCAACCACAACCAGGATGT
AACCTCATGCTCATCCCAAACACCGTCCCTTCACATAAGAACGAAGAAAA
GTATTTACTATCTCAGGCGCATGCGCTTAAACAAAATGCTCAACTCATGT
CCATGCAAGCGGATATCCTAGAACACGAGGTAACTTCCATCAAGGGCGGA
AGCGGACAACACGTAATGACAGTTGAAGGCGGCCACCCTTTACAAGGTTT
ACACGCCCATAATATGCGTTTACACAATGATTATTTTAATGTTGATAAAC
CGGTTCATTTGCCTTCCGGGCACCACGGGCACGGTCCGGAACACGGTGGT
ACTGAAGACCTGATTCATAATGCTGAACATTATAAGGAAGGAGATTCTCA
TGACGGAGGTGGTAGCCTCAAGGTGGAAGGCGGGAGCAAGATACAGTCTA
TAGGGACTGGGTATCCGCAATATAATTTACCAACCAAACCAATGGGTGGA
GGGGGAGCTTCAGGTGCGGCAGGTGCTAGCAGTAGTGGTGGTTTATTCGA
ATTCGTTAGACCTTTGCCACCTGCGGCAGGACCCAACCCGTATGAAGTAT
TGACGTCCGCTACCCTTGGTCAAGACTACCCAGGGGTGTCTCAGAAACAA
TCAGCTTCAGCCATGGGTTTCAACGAAGCTGGCGGAGCTGGTATGCAATA
tgaagtgctgacgtcagctaATCTTGGTAAAGAACTACCTGGTGTAACGC
AGGAGCAATCTGCGGCAGCCATGGGTTTTAATAATGGCGGTGGAGGTGCT
ATGGTGATTTCGAAACCGATGAAATTTGTTGTTTCTTTGAAAGGACTTAA
AGTCAAAGAACAGAAAGCTCAGAAGCTGATCAATTTCACTGTAAAGAGAG
ATGGGGGTAAAAGTGACTAG Coding sequence (CDS) from alignment at sc0000143_pilon:506343..510412+ >XLOC_038216 ID=XLOC_038216|Name=XLOC_038216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4206bp|location=Sequence derived from alignment at sc0000143_pilon:506343..510412+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGGTGAAACAACTGTCGTCACCAGTCCTCGTCTTCATTTTCATCCT
CCTCTTTATCCAAAATAATCATGATGTGGGTGAAACAACTGTCGTCACCA
GTCCTCGTCTTCATTTTCATCCTCCTCTTTATCCAAAATAATCATGgGTC
AGAGGTGGACTCCGAAGAAGAGGCTGCTTCATTTCTTCTCCAGAAATCAC
TGATCAAAGCACGAATGAAAATCAACAGACATGTTATCCATAGACGACAA
GCGTTATATCATCATTTTGTTGAACTGGAGGACAACttttttgaggaaaa
cgatGCAGACCCTGATAATGATGAGGATGGCGACGGTTGTGATGTAGACC
GAGAGGAAAACATTAGACTAGAAACAAGGAATCTTACATCTGATGCCATA
TCGGATTCCACGAAAAACGAATTCGAAAATCCTTTCGATGACGAAGATAT
AGAAGAATCAGGAGCTCATAGACCATCAGATGATCCCAATGTAGCCTACA
CAACATTGACAAGACAGAACGATGATAAAAGTATTGAAACAGGTTTAAAG
GATGGACTGCAGGCTAAGGTACAACACCCTGTTCTAAAGAGAAACCATAC
AACAAACAATACGAAACGTCATCACAAAAATAATAACCAATCAACAACTG
TTATAAAAGACTTATCCACAAAACAGTTTATTCAGTCGAAAACGTATGAA
CCACGACTACGTGAAAATAGAAGTATTCAAAATGAACATGATccttttgg
aaaattgaaaaggAACACGACTTTTCCTAGATTCTTACCATCAGATAGAA
GAAGATCGAACTCTACGCTTGGCACAGGCATCTCTGATAGCGAAaactca
aaaacaacaaaaatacagGAATCAAAGCCAATGCTCCCTATAAATatcaa
tgttaaaaaagactttaaatcaaataaaacacATGGAGACATAGACACAG
ACATAGATAATGAACAAGACTTACGCTTAACTAATAGACTGAAATCGAAC
GCGCAACTTCGCACACGCATAAATGCTATAAAAGATTCACACTTGACAAA
CCGATCGAAATCGAACGGGCAACAGCGTACAGACATCGGTGTTTTAAAAG
ACCCACACTTAACTAACCGATCGAAATCGAATGCGCAACTGCGTACAGGT
ATAGACGATAAACAAGTCTCACGGTTAACTAATACACTAAAATCGAAAGC
GCAACTGCGTACAGACATAAATGCTATAAACGGCCCAGTATTCGGCGACG
AAATCATTCACCAAACATCAATTGCGCATGCTCCATGTCAACCACAACCA
GGATGTAACCTCATGCTCATCCCAAACACCGTCCCTTCACATAAGAACGA
AGAAAAGTATTTACTATCTCAGGCGCATGCGCTTAAACAAAATGCTCAAC
TCATGTCCATGCAAGCGGATATCCTAGAACACGAGGTAACTTCCATCAAG
GGCGGAAGCGGACAACACGTAATGACAGTTGAAGGCGGCCACCCTTTACA
AGGTTTACACGCCCATAATATGCGTTTACACAATGATTATTTTAATGTTG
ATAAACCGGTTCATTTGCCTTCCGGGCACCACGGGCACGGTCCGGAACAC
GGTGGTACTGAAGACCTGATTCATAATGCTGAACATTATAAGGAAGGAGA
TTCTCATGACGGAGGTGGTAGCCTCAAGGTGGAAGGCGGGAGCAAGATAC
AGTCTATAGGGACTGGGTATCCGCAATATAATTTACCAACCAAACCAATG
GGTGGAGGGGGAGCTTCAGGTGCGGCAGGTGCTAGCAGTAGTGGTGGTTT
ATTCGAATTCGTTAGACCTTTGCCACCTGCGGCAGGACCCAACCCGTATG
AAGTATTGACGTCCGCTACCCTTGGTCAAGACTACCCAGGGGTGTCTCAG
AAACAATCAGCTTCAGCCATGGGTTTCAACGAAGCTGGCGGAGCTGGTAT
GCAATAtgaagtgctgacgtcagctaATCTTGGTAAAGAACTACCTGGTG
TAACGCAGGAGCAATCTGCGGCAGCCATGGGTTTTAATAATGGCGGTGGA
GGTGCTATGGTGATTTCGAAACCGATGAAATTTGTTGTTTCTTTGAAAGG
ACTTAAAGTCAAAGAACAGAAAGCTCAGAAGCTGATCAATTTCACTGTAA
AGAGAGATGGGGGTAAAAGTGACTAGgGTCAGAGGTGGACTCCGAAGAAG
AGGCTGCTTCATTTCTTCTCCAGAAATCACTGATCAAAGCACGAATGAAA
ATCAACAGACATGTTATCCATAGACGACAAGCGTTATATCATCATTTTGT
TGAACTGGAGGACAACttttttgaggaaaacgatGCAGACCCTGATAATG
ATGAGGATGGCGACGGTTGTGATGTAGACCGAGAGGAAAACATTAGACTA
GAAACAAGGAATCTTACATCTGATGCCATATCGGATTCCACGAAAAACGA
ATTCGAAAATCCTTTCGATGACGAAGATATAGAAGAATCAGGAGCTCATA
GACCATCAGATGATCCCAATGTAGCCTACACAACATTGACAAGACAGAAC
GATGATAAAAGTATTGAAACAGGTTTAAAGGATGGACTGCAGGCTAAGGT
ACAACACCCTGTTCTAAAGAGAAACCATACAACAAACAATACGAAACGTC
ATCACAAAAATAATAACCAATCAACAACTGTTATAAAAGACTTATCCACA
AAACAGTTTATTCAGTCGAAAACGTATGAACCACGACTACGTGAAAATAG
AAGTATTCAAAATGAACATGATccttttggaaaattgaaaaggAACACGA
CTTTTCCTAGATTCTTACCATCAGATAGAAGAAGATCGAACTCTACGCTT
GGCACAGGCATCTCTGATAGCGAAaactcaaaaacaacaaaaatacagGA
ATCAAAGCCAATGCTCCCTATAAATatcaatgttaaaaaagactttaaat
caaataaaacacATGGAGACATAGACACAGACATAGATAATGAACAAGAC
TTACGCTTAACTAATAGACTGAAATCGAACGCGCAACTTCGCACACGCAT
AAATGCTATAAAAGATTCACACTTGACAAACCGATCGAAATCGAACGGGC
AACAGCGTACAGACATCGGTGTTTTAAAAGACCCACACTTAACTAACCGA
TCGAAATCGAATGCGCAACTGCGTACAGGTATAGACGATAAACAAGTCTC
ACGGTTAACTAATACACTAAAATCGAAAGCGCAACTGCGTACAGACATAA
ATGCTATAAACGGCCCAGTATTCGGCGACGAAATCATTCACCAAACATCA
ATTGCGCATGCTCCATGTCAACCACAACCAGGATGTAACCTCATGCTCAT
CCCAAACACCGTCCCTTCACATAAGAACGAAGAAAAGTATTTACTATCTC
AGGCGCATGCGCTTAAACAAAATGCTCAACTCATGTCCATGCAAGCGGAT
ATCCTAGAACACGAGGTAACTTCCATCAAGGGCGGAAGCGGACAACACGT
AATGACAGTTGAAGGCGGCCACCCTTTACAAGGTTTACACGCCCATAATA
TGCGTTTACACAATGATTATTTTAATGTTGATAAACCGGTTCATTTGCCT
TCCGGGCACCACGGGCACGGTCCGGAACACGGTGGTACTGAAGACCTGAT
TCATAATGCTGAACATTATAAGGAAGGAGATTCTCATGACGGAGGTGGTA
GCCTCAAGGTGGAAGGCGGGAGCAAGATACAGTCTATAGGGACTGGGTAT
CCGCAATATAATTTACCAACCAAACCAATGGGTGGAGGGGGAGCTTCAGG
TGCGGCAGGTGCTAGCAGTAGTGGTGGTTTATTCGAATTCGTTAGACCTT
TGCCACCTGCGGCAGGACCCAACCCGTATGAAGTATTGACGTCCGCTACC
CTTGGTCAAGACTACCCAGGGGTGTCTCAGAAACAATCAGCTTCAGCCAT
GGGTTTCAACGAAGCTGGCGGAGCTGGTATGCAATAtgaagtgctgacgt
cagctaATCTTGGTAAAGAACTACCTGGTGTAACGCAGGAGCAATCTGCG
GCAGCCATGGGTTTTAATAATGGCGGTGGAGGTGCTATGGTGATTTCGAA
ACCGATGAAATTTGTTGTTTCTTTGAAAGGACTTAAAGTCAAAGAACAGA
AAGCTCAGAAGCTGATCAATTTCACTGTAAAGAGAGATGGGGGTAAAAGT
GACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000143_pilon | genome | sc0000143_pilon:506343..510412 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 76-2103:2043 |
| Aaloc | 1-72:1 |
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