|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000318_pilon:50639..54354+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038197 ID=XLOC_038197|Name=XLOC_038197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3716bp|location=Sequence derived from alignment at sc0000318_pilon:50639..54354+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGTATTTCCCTTGGCAGGATGAGACGCTGATGGAGGGATGCTGTTTGAA
GTATGAAATGGAAGATGAAAGTGACCGCGCGACATTTAATGGAAAAGGAG
GTTCACATACAGGTAATTTGAAACATATTTTCTTCGCATGAGTGTGTCTT
TAGTTTACCATTAGCCTATTTCTTTGAACTCGTGCATCTGCTACATGtca
ttttctattcaatttacaaGGGGAAAATGCACAAATCTGTTTAGATTAcc
cttttagaatttttttttcattatccAATTGACTTCAAGAATTCTTTTCc
attatttcataaaaagttgATTACTGCAATGACCTAGAAAAATATAATGT
ACTTACTCGTTTATTAAAATTCGAAcgtaaagttttattttttcgaatta
cacaGGAATCCAACTTTATAGGGGGTAGTTTAAGTTTCCTTCACGGGGAC
TGAGAGCTAGTTTTAAGGGGTTACAGCAACTAGGAGAACTAcgggttttt
tttatataaatgttcaaaatcttttaagccttcggatcaTGGATGTTCTT
ACCCTTTGAGTTTTAGGTCAAAACTGTTCTTGAAATAGTTTTGTGTACTT
tactaagaaatcgggtgttttagagtccttaAAGCCTTAAActtgttctc
aacattttggCTACCGTAGCCTTATTTTCTCATAGTCATATagtttgtcc
ttataaaaaacatgctAGTGTGGATTTTAGATTCCTTCAATCGATaaacc
tataaacaatataatgacaaatcaaaaattacaagaattccacaaaaaga
aattaaaaaacccATGCCAACCCATTGAACagttttaattgttttattgT
CAAACTTGGAATAAACAACACGCTTTGGCTTGCTTTCAAAgacttttcat
tttcgtttcgCTCTCTCGTTTACGTtggaattgacgtcaaaaggcATGAA
GCCAATTACGTTAAcgacttttttgtttacaagtttCTTCGAAATTAGCA
TTCAATTATCATTagaattgttttcaaataagaatAGAAAACTCGTTAAA
ATGGTAATTCATGGTTAATTTCTAATGGTATGCCTATCCAATCCTTCGCA
ACCGAGAGTCATGTGATACACTTTTCGACCAACGAGATCAATTTTTCAAT
GGGAAAACAAACTAGTTTGAGTTAAGCCATAGTGACTGATCTGTTTTCAT
CTAGTTCTGAGgccattttaattattttaaattgaTAAATAAAGTCGTTA
AAATTGTGATCCACCTATCTATCCTCACTGAACGTCATGCAGTATACttt
ttttCAACTTGGTTTCGGAGTGCATTTGtttccattgaattttaagTGTG
AATGATaacaaaaagtcaattttccaccAGGATGAATTTGTAGGGATTTT
CCCACCAGGGAGACTAAATTTAAACCAAATATTCCAGTAGAGTTAGGGTC
CCAACGGCTCTGTGTCACATGAATATAAGAAAACACAAACATAATACTGG
ACGAAGAGATTTAAACAACATatatcaaaatccaaaaagtagAGCAAATA
AATGCgttaaaagttttgattttcttataaaaaaaacaaaaagcaatTAA
AGCATCCTCTTGCATTCCGTGCCAGACACGACCAGGGCGGGGCGTTCGAA
ACCACGAAGACGCCGCATGGTCAATCAAAAAGAGTAATTTGTTACTCTTT
TATGAGAGAGATGTTATAACCACTTTTGgatttcattttctaaaaatttt
cattaaatgttCTTGTCTTCGgtatttttggtgtaatttcaTGAGGAATC
GCATGTTTTAGAGTTTTTGAAATCCATAAAACCGTTGGCTTGCACTGAAG
ACTTATATTCTTATATGGAAAAGAGTCAATCGTTACACAACTTTGCTTCG
ACTAATGATAGCCTTTGTATGCTCCGCCCTACCTCGTAAAGATAGTTTCG
AAGCTAAACTGGTCTCAACTTTTTGTTTACAGACTGTTTCTATGGTGACG
AGACaaacaaaaaacttgaaaaagtatGTTTGGGAAAAGTCATTCAGCTC
AAAGCCGAAGGCTATAGAAGAATCTTCTTACCTccctcaaaaaaaaaagt
gaaagccTTGGAATTTGCGTTTTATTTCGGATGGCGGATTGAACCTAGCA
CTTTCATTGATTTCTGGCCTTAGATTTTTTAATCTTCTACCGGAATATGT
AACTTTCAATCTGGTATCTGGATGAGAACCACGCGGGCCGCGCAACCAAT
GTAGAAAATAATAGGTTCCAAATCCTACATAGCAGTCTCGTCTTTAGCAT
TTGGCGATaccctattcatgatatgcaccattgcaatgtcttccgttcca
cccaatagctgattggttgaaagtgacgtaatgtcagaagacattgtagt
ggtgcatatcatgaattgggaaAACTCGAATACGTTTCAATTAATTAACT
GTAAtataatacagggtgtcccgaaaaaaagtatcgagctCGAACacgat
tctgagtagaaggttatcgcgtgtgtttaacaaaatgtaagaaaatatat
accaacacaattattgtttttacaacaatcgttttgattaaaaataatta
actctctttacaattttcagaacgttaaagttattgagaattgttttttg
taaaacttattcataaaagatgtctcatgacaattaatatgacacagaga
gaaactttgataaacattgcaaatttcatagtgaaacacacacaaaaact
ttctttctatagaagtgttAAGACTCGATAttttttttCGGCACACCCTG
CACACATGAATTAAACAAACTAAAGaactctttttgaaaattaaaagttt
caaaagacACTCTTTTAGCCGCCTCAATTTATAAAACTCTCGGCTTAGGA
TGAGGATGAGGATTTAGCACAACAAATACCAAAactatttgttttgaaat
taataaCAATATAGGCAAACATCTTTCTACTAGAAAATCTTTACCGATCA
CGGAAATGTAAACTCTTACATAGTACACATATTGTATTTCTACCATTATG
GAAATATAcgcgttcgaatctgtagaagTGATTCCTGACGTAAATCgaaa
aaacaaccatttaaATGCCCAGGCAACAATATTTCCATGTGTTTAATATA
GGGAAAATATTTACCGGTAACGGAAATGTAACTgtcttacaaagattgtt
tctAAATACGGAAGCTTTAATTGATTTTTCCACATGAAATTACATAGACA
AACCACATTTGATTGTAATATATATTGCATCTTTGTAGCATTTACATAAT
CCATTCTAAAATCAACTTTCTCTTTTCCCTTCTCAGGATCAGATAGCGGT
ATAACCTCAACATCGTCACCTTTTGAGATTCAAATCCTGACACCCTTCCA
TTCAGGAATGTCCCCTCCAACAATGTTGGTATCATCGTGCTGTGATAAAG
ACCATGGGGACATCGATTCTCTCTCACCTGCATCTAGCTGCCATCATGAG
GGATCAAGCCCGTTCTTCTCTCGGTCTAGCTCCAGTCAGGATGGATTAGG
CCCGATCTCAGCTGAATCTAACTATCACAGAGATTTACCAAGATCCACCC
TATCCGCACATAGCTACAACCATATGGTAGCAGGTTCCCTCTCGCCTGCT
TCGAGCTACCACCACGAGGAAGAAATGATACCATCCCCTTCCGGGCAACA
TCAACAAAAAAGCAGT Coding sequence (CDS) from alignment at sc0000318_pilon:50639..54354+ >XLOC_038197 ID=XLOC_038197|Name=XLOC_038197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=984bp|location=Sequence derived from alignment at sc0000318_pilon:50639..54354+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGTATTTCCCTTGGCAGGATGAGACGCTGATGGAGGGATGCTGTTTGAA
GTATGAAATGGAAGATGAAAGTGACCGCGCGACATTTAATGGAAAAGGAG
GTTCACATACAGGGGTATTTCCCTTGGCAGGATGAGACGCTGATGGAGGG
ATGCTGTTTGAAGTATGAAATGGAAGATGAAAGTGACCGCGCGACATTTA
ATGGAAAAGGAGGTTCACATACAGGATCAGATAGCGGTATAACCTCAACA
TCGTCACCTTTTGAGATTCAAATCCTGACACCCTTCCATTCAGGAATGTC
CCCTCCAACAATGTTGGTATCATCGTGCTGTGATAAAGACCATGGGGACA
TCGATTCTCTCTCACCTGCATCTAGCTGCCATCATGAGGGATCAAGCCCG
TTCTTCTCTCGGTCTAGCTCCAGTCAGGATGGATTAGGCCCGATCTCAGC
TGAATCTAACTATCACAGAGATTTACCAAGATCCACCCTATCCGCACATA
GCTACAACCATATGGTAGCAGGTTCCCTCTCGCCTGCTTCGAGCTACCAC
CACGAGGAAGAAATGATACCATCCCCTTCCGGGCAACATCAACAAAAAAG
CAGTGATCAGATAGCGGTATAACCTCAACATCGTCACCTTTTGAGATTCA
AATCCTGACACCCTTCCATTCAGGAATGTCCCCTCCAACAATGTTGGTAT
CATCGTGCTGTGATAAAGACCATGGGGACATCGATTCTCTCTCACCTGCA
TCTAGCTGCCATCATGAGGGATCAAGCCCGTTCTTCTCTCGGTCTAGCTC
CAGTCAGGATGGATTAGGCCCGATCTCAGCTGAATCTAACTATCACAGAG
ATTTACCAAGATCCACCCTATCCGCACATAGCTACAACCATATGGTAGCA
GGTTCCCTCTCGCCTGCTTCGAGCTACCACCACGAGGAAGAAATGATACC
ATCCCCTTCCGGGCAACATCAACAAAAAAGCAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000318_pilon | genome | sc0000318_pilon:50639..54354 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 115-492:3339 |
| Aaloc | 1-111:1 |
|
