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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000213_pilon:422917..427407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038160 ID=XLOC_038160|Name=XLOC_038160|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4491bp|location=Sequence derived from alignment at sc0000213_pilon:422917..427407- (Clytia hemisphaerica_ch_hm2_pilon)
TTCCGAGATCGTTCTAATTCATCTCCAAGTAATATATATAAACCGGTCAG
TCATACCGAATTACGGAAATCGAAAAGCAACGGAAGCATCCCGGACGAGC
ATAAAGATGAGAAAAATGATCCAGAATATTGGAAAACATTACGTCATCGT
TTGCTTACCTGTCAACCAGCGTCCATTGTCACTAGCTCAGATGTCGACGA
AATTCCACAGCTCCAGGCTAATGCCACGTTGGATAAGCGTCATATAAGAC
GGGCCAGGTCATGGTCTAATCTTTCGACTTGGAAAACATCAACAACAGAC
TTGAAACAACCAAGAAGGCAATCTTCAGCTCGGTTGAGTAGTAGTAAAAA
ATCTCAGCAACGTGTAAAATACAGACCAGAAGATTTCCTTTTACCTGAAA
TTGAACAAAAACATGAAGAGAATCATGAGGTTCATAGCAGTCCGCATTTT
AGACAAACAATGTGTCAAGTATTGAAACATAACAACTGAAATTGGAATGG
CAATTTTTTGAGAATAAAAACAGTATTATACTTAATAAATATTTTTTGAG
AGACACTTAGAGCGATATACGTCGTTATGACGTTCAAAATCGCAAGAAAG
ATACAAAAACATCCTATGTATAAGAAATTGAATATTGACACCAGAAATTT
CTAAACTTCAACCTCAAAAAATCCATCGTGCCACCACGTGCCACCAAAAG
ATTTTAATACTACAGTTGAGCTATGAGACACACGTCTAACATATGTCAAT
CTTAGCTCTTCTCGGAAAAATATAAGAACAACTTTCCCAACTAAAATGTC
GTGTCATTATAAGCATTTTGTTTGATTTTACTCGTCTGATGATGTTTTGC
TCACACCAGATTTAATAAATGTACATGTTTTTTATAAGCATTGCACTTGT
AAGCATATCTAGGCTCAGATATGGGGAAAAATTAAGCATATAGCAAGCCT
ATGAAAAATGTTTTTTCCTGATTGTGGCTTTTTTTTGGCTGGAATTTTAA
AACTTTTCAGAATTTCCCTAAATTTTTGCTTTGGATATAAGCATCCCTCA
AGCATTTTCCTAGCTTTATTAGGCTTTCGAACTAAGCATCTCTGAGCCTG
TTTTCGGATTTTTATATGCTTATAAAAAAACATGTATCCGCTTTGTATTC
TAGCTTGTTTTCAAACTTTTGGCCAGCAGAAGTAAAATAGTTAGAGAATT
TTTTAGAAATTATAGAGTATATCATTTTTCAAAATCTTTTCTGAAACAGT
GGAAAGATAACAGTTTCACTCTCCACCGTTTCATTCGATGTTTATCCAGA
GTCTCTATGATAAATCCATGGTTCAAACAATAGATATTCAATTCCGATGG
TAACTAAAATTACTTTGAAAACGAACGTTGTATTCATTAATAATGATAAA
GACCAATATTATTGATTTAAAAATACCCAGTCCCTTTGCAAGGGCTATCT
CAGACCAAAACATACCATACTTGTTTTTCTTTTCAAAATTAAATCTCGGT
TCCTAAAGGTTTTGTTTTTAAATAAGATTGATATCGTTTGCTTGCTCATC
ACTTTTAACTCACAAGCTTTTTCACATTGGATTAACACGGATGTGGAGCA
AGATTGGTCAGAAAGAGGAAAAGAAAAACATCGTTTTGTTTATATCAGCA
CAATATAACAATAGAAAGACACTGTCCTGATATGAAATATGTGTCTGATA
TGAAACAGGTATAACAACTTTAAAGCACCAAAGATCTGTAAGTCAATTTT
CATTATAAGTCATTCCCTAATAAATAGCAGCAGATATACATGGGAGAGTT
ACAAGAAAAAAAGGTCAATGGGTGCGGAAATATTGTGGAACCACTTTCTA
GGAGATTCAAGTCAAACATCGTCTTTTAGGTAAGGTCGTAACCCCACCCA
CTAAAGTAAGAAAATCCTGTCACAAAATGTTATTTCGATTTTCATTTTAA
CGGATGTTGGATCGACATTAACAATATTTTTATCAGGGATATATAGGAAA
AAGTGGCAAAGAAATTGAGTAAGAAAGAAGGAAAAATGCATTATATCGAC
CTTTGACTCGTATGAAGCAAAAAGGGAACACAAAAAGACCATTAAAATAA
TATGGTACATAGTGTTTGTTCAAAAAACTTTTTTCTAGGTAGAGCGATCA
GTATAAAAAGGCCAATGCCGGTAGACATCAGGGGCGGTGCGACACCCCTG
CAAAACATGCACTCGCAGGGTATGCTCCAGAGTCTTTTTTGTCGCAGCTT
GTTTTTAGCCTACCCGGAGTTTTTCCGGATCATTAGTTAGTGTCATTAGA
TTTATTTTACTGACTTAAAGTCCGCGGTAAATATAAGAAAACTGTTTATC
AAGTCGCGTTACAGGAAGCGTGAATTCGAGTCTGTATTTTAGATTTTGTG
TACAAAAGCGATTTTGCAGAAAGACCTGGATGAGGTCAAAATGCAGGGTT
TGCCCGGGATTTGATGGCTGTTAGTGTCAAAACGTTAAAAGTCAAGACTC
GTCAAATGGCTTTAGATGCTTGGAGCAAATTTCCTGAATCACTATATATA
GCTGAATCTTTTTTGCAGCGTATCCTAAAAATCCTACATACGCCCCTGGA
CATAGCTGCACATCGCTTGCTTTAATTTCAACCTTAAGTACGTGTAAATA
ACATTTGCTAGTGCTTTTAAGTGTGGTTATTCAAGCTATAATAGGCAAAG
TGCGACATTCTATCATCATGGCTAGATTTGTTCTATCAATATCTTTGGTG
GTTCTTCTATTTGGTATAACTCTCGGAGAACAGATTCGTCCGACTCCAGT
GATCCACAGATGCCCTACAGCAAAGCAGAAGTGGAGATATTGTAAGATAA
CCTTTCAGTATTTGCCAATCACGTGAATGTAGCACAAGAACCACAGGCGG
CTTTTTGCTGTTGAAGACTCTACCGACTGTTTATTTGCTATCCGCAACTA
CATCGAGGTTTTTGTGATACATGATATACTGTTCTACTGTTCTTTGGTGG
ATAACTTTCACGACATTTGCAAATTCTTTCCACTTTTACGCGATTTTTGC
CAGAGGACATTGATTGGTAAAATTTAGTCTACACAAAAGTTTTAAATCTA
AAATAGGGACTCTCCTAAGGCTTCAGACGGTTAAGTTTTGAATAACTTTT
AATTGTATAGCTTTTTGTGCACATGTTTGTAGGTGGCGGAGAGAGATATG
ATCGAGTTGCAGAATTTTGTTGTGATGGTGTGAAACTGGCAAAAGAACCT
TTCAAACGGTGCTGTGGGTGAGTTAATGTTTGTAAGAATCATTTTCTTTA
CCCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAACGTTATATGGAC
GTTGTGAACGTTAGATAAACGTTGAAACAACGTTGTGTGCCAGCTGGGTT
AGCTTTTAGAATTAAACCACTAATTCGCAATATCAAGATGTTTGTTTTTA
ATGTTTCATTACGATATATTTCGAATTATTACAATTTCAGAAAGCGTCTT
TATGATATCGAATCAGAGCGTTGTCGAAATGGTTTCGTCTTGATCAAGGA
AAAGAGGTGCAGAGGACGAACCTACGATCCTAAGGATAGTTTTTGCCACC
GATGCCAAGTGTTCTCCCATAATGAGTTTGTGTATTGCGATGGCAGCCTT
TATCCTAAGACATCCCGAAAACAAATTTAAAGATCCCTTATGATACCTTC
GAAATTCATTTACCATCGTATCAATCAATACCAAGTCACGTGACGTTGTA
TGGATGAATTATTTTGTTTGCAAAATAAATTATTATGAAAATTTAAAAAT
TATTCATAAGACAAGTATTGTGTTAGTAAAACTTTCTGTATCCAAGAATT
TATAATTTCTTATGGAGTATATTTCAAATCTTTTAAGATTTGCATGTAAT
AAGATTATAAGATTTCTGAAATTACTTATCAAATTTTGTCCCGGTGGGGG
TGGGGCACTCGATTAGAAAACGACCATACGTGCGGCCTAAAATTAGGCCT
TTGAAGTCAGACCCTTACAGTGCAAAGAAAATTTAGCCAAATTTGAGTAA
ATTTGTGCAAAAAAACTTCCCTTACGGTGCATTTTCTTTAAGATATTTGA
CCGTTTTTAGGCACGATATGGTCAAATTTTACTCCTTAGAGTGTACTTTT
CTCATCTTTGCTCATTTTGACCCTTACTGTGCATTTTGGTAAGCTTGGAG
AAGGGACCCTTAAGGGCCGCACGTACGGTAGGTCGTTTAACTTGAGTGGC
CCCCCTCCACGGAATTTATCCCTTGTAAAGAAGATATTTAATTAAATAAA
GAAACATAAACCAGAAACATCTGAATACCATTTTTAATAAATAAGCGTTG
AATTAAGAGAAAAGAAATTAACAGCCATATTTTGGAATTCGTAGATAACA
ATCTCAAACTACAAACACACACACCCACACATTTAAGAGAAATCAGTGAA
ATTGATACTTACGAATTTCTGTGCTTTTTCCAAATTGTTGA Coding sequence (CDS) from alignment at sc0000213_pilon:422917..427407- >XLOC_038160 ID=XLOC_038160|Name=XLOC_038160|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=846bp|location=Sequence derived from alignment at sc0000213_pilon:422917..427407- (Clytia hemisphaerica_ch_hm2_pilon)
TTCCGAGATCGTTCTAATTCATCTCCAAGTAATATATATAAACCGGTCAG
TCATACCGAATTACGGAAATCGAAAAGCAACGGAAGCATCCCGGACGAGC
ATAAAGATGAGAAAAATGATCCAGAATATTGGAAAACATTACGTCATCGT
TTGCTTACCTGTCAACCAGCGTCCATTGTCACTAGCTCAGATGTCGACGA
AATTCCACAGCTCCAGGCTAATGCCACGTTGGATAAGCGTCATATAAGAC
GGGCCAGGTCATGGTCTAATCTTTCGACTTGGAAAACATCAACAACAGAC
TTGAAACAACCAAGAAGGCAATCTTCAGCTCGGTTGAGTAGTAGTAAAAA
ATCTCAGCAACGTGTAAAATACAGACCAGAAGATTTCCTTTTACTTCCGA
GATCGTTCTAATTCATCTCCAAGTAATATATATAAACCGGTCAGTCATAC
CGAATTACGGAAATCGAAAAGCAACGGAAGCATCCCGGACGAGCATAAAG
ATGAGAAAAATGATCCAGAATATTGGAAAACATTACGTCATCGTTTGCTT
ACCTGTCAACCAGCGTCCATTGTCACTAGCTCAGATGTCGACGAAATTCC
ACAGCTCCAGGCTAATGCCACGTTGGATAAGCGTCATATAAGACGGGCCA
GGTCATGGTCTAATCTTTCGACTTGGAAAACATCAACAACAGACTTGAAA
CAACCAAGAAGGCAATCTTCAGCTCGGTTGAGTAGTAGTAAAAAATCTCA
GCAACGTGTAAAATACAGACCAGAAGATTTCCTTTTACGAATTTCTGTGC
TTTTTCCAAATTGTTGAGAATTTCTGTGCTTTTTCCAAATTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000213_pilon | genome | sc0000213_pilon:422917..427407 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 538-564:28 |
| Aaloc | 142-534:4492 |
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