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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000213_pilon:433831..436875+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038159 ID=XLOC_038159|Name=XLOC_038159|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3045bp|location=Sequence derived from alignment at sc0000213_pilon:433831..436875+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGTCATCAATTCCGACGACAACGGCCGTTACCATGACGATGACGTATAT
TCCCATCCAGACGACGAACACGAACAACAAATTACTCTACGTGCCCGTCC
ACAGTCAATCATCCAATCACCGACAACCGGTTATGTTGTATCCCGGTAAT
CCGCCAATCAAAAATGGGAAACCGATCGGATTACCACACCAACTGTTGCA
AGGCAACAAGAATGTCTTAGTTATGCCTAGCAACAAAATAGATGGTGCTT
TCACTACGGTTCGCATTCAAGGGACGTCTCAAAACACAGTACAAAGTCca
caaatgacgtcatcatcatcgAATGTCCGACATCCAGCAGCCAATGAACA
GCTAAGAAATGATCACGTGATAGGTGATAAGCCTATCAAAATAGATTGTA
TGGATGATAACGTCATTAAAAGAGAAGGAAAAGTTGAGGAAAAAGAGAAC
GAGAATAATAAACGAACCTTTCAACAAATAAGCCACGAGAATCATTTGCA
AAACAACGACTTGGTACCAGTGCACAAGAAGAAACGTGGTCGACCGCCCT
CGTGTGAGTTTCATGAATCTTTTGTCTGTTTTCAGGGCCCgtggaagcat
tttcatattagcCATTGTTCATTGTTCTTCCGTCTCAGTGAATTATTtaa
agaggcttttccgtctcaaaGATCTGCATAATTCTCCAAAAGACGGCAAG
ACGTCTCAGAGAACAACCTTGCTTCGACCACTGATCAGCCCATTGTAATG
gcaatgacgtcatttgggaTCGCTCATATTTTATGGTCTTGTTTTGCCTG
GAGGTCTAGGTGTGGACCTATAGGAGCATTAATTAATGGGGCAAAAGGGG
AAATATGGAGACATGAACAGATTAcccaaaaatttccaaatgaaAGCATC
TAGATTATTCTCTAGTCAAGGAAATCTTAAAATGAGATTGCTGTCCTCCC
GGCTGCTACAGGCCTATCTAGTTATGTCATCTTTGTCATTAAAAATATCC
TTAAACAAAGCTATTTGAACAAATGTTTGCCCACGGACGGGGTGTGCTAC
TAATCTTAGAATAGTAAAATATGGGTTCATTTGTTAATGTTAAGGATGGA
ACATTGGTTATTAATTTATTTCTGTTTTCAGCGAGCAAACTCCTGCACAA
AAGTTTCCGACCAGCAGACAACACTAATCCTATCACCTTGGCTAACCGTG
TCCTGAAAGATGCGTTCTATAAAAGTAAGTCAATGTATTGTAGATTCTAT
TCCACCTCAACAAACATCATTAGCGAGGTTATGTATCTGAAATTCTCTAC
TTCTACGGTTAGTAGCGGCGAGGGAGATGAccagtaaggcaagtaatggc
ggttGTAaacaagttcgatatttgacgtacgacattatgtcgactttgct
tatacggcgttttggtgtttttcccgtacagtccaaagtagacaacgaca
tgtcgcatttggtgacgacccgtatgcccgcaaccgtagccgtagaatat
ctccgatacataatctctctATTTAAATATAAGTCCCAAGGGCTTCGATG
TGTAAGCtcaaccggcgtttgcgactaCGGGAACCGAGTAGTTATTATTG
TCTTTTTATATTTCTCGATATTTCCCTGGAATTTTCATGAACAGTTtgta
atttatatatttttttttcgtttgattCGTAGAGCAACAGCAAATTCAGA
ACCAGCTACAAAGTTACATCGATGAACATCTATCCAAATGTCCGGAATGG
CCGGAAAACCCGGGACACTGGACGTCCGGTGAATTGTTCAAATTCCTCTC
GGTCACGGATTGTGCTTCTTTTGCCGACATTCTGAAAGACGAGGTGATTA
AGTCTTTCTTTTTCGAGAACGATAATTTGTGAGTTaaactttaaccggat
taaatttcgccagattaaatttcgcgagctaagaaaatcgcgaaattttc
tggatttaagccagaaaacagctgaaaatagccattttttgccataaatg
gagacttggaactagtttctccgCCAAGAATACAatcttaaaagttttgt
ggtggatttaatttcgtgaatcaggaatctcacgcgtgttcgcgagtttt
aatttcgcgaaaatggcaaaaattcgtgaaatcgcgaaatttaatctcgc
gaaaattaatccgatgaAAGTATCCACTCTTGGTCAGTAGCATGGAGTTG
CAGAGGGCACACTTTGCCGTTTTTACTTATAAAAATTGGAGGAAAATATC
CAAAAAGAGGGAACGCtaaaatacacccccttctcacagacccggtaggt
tttttttagccagtggggataaaaacagcggactgaaactcgatagggat
tgatattcccatatttttatggttgagtatttcaattcttttgtttttaa
gtcagagaATTTAGTGGGAATGGGGAAAAAGCGTCATATTTTGCAACGAG
GATTGGtctatttgatcattttcagtggggacaaaaattggaggataatt
ttttaCTGGGGGcaatatttttgacaatttttccagtgagagGTGTTTCC
AGTggatttgtgagaagggggcgcTAAAATACAAACAACTCCTCAGTTTA
CCCCAAATGGTTGGtccttttttctcttttgaatttCTATCTAGGACCTG
TCCATTATACCATGCTGATGCTAAAATGATACTTTATAGAATTAGAAATT
TTACCAGCTTAGAATTGGGGAAGAAGTTTGAATACATAATTTTCTCTGTC
ACTGCAGGAAATCGATGGAAAATCGTTTCTTTTGTTAACACGCGAAGCGC
TGATGGAATTCAAAGGTATCCGTTTAGGTCCAGCTCTCAAAATTGCCGGT
TATTCAGCGTATCTTCGAGCTAGAAATCGAATCCTGAACATTGAACGAGT
TTCGAATCGTCAAGTACATAGAACTCCTTCTACAAATTCCCCAAACGTAT
CACGTGCTCAGATGACGTCACAAGAGAGAAAAGATAACACTGCATTGGAG
GAATTCCCGAATAGTATTCCAACTTTAAGCATAGTTATGCTTTAA Coding sequence (CDS) from alignment at sc0000213_pilon:433831..436875+ >XLOC_038159 ID=XLOC_038159|Name=XLOC_038159|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2190bp|location=Sequence derived from alignment at sc0000213_pilon:433831..436875+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGTCATCAATTCCGACGACAACGGCCGTTACCATGACGATGACGTATAT
TCCCATCCAGACGACGAACACGAACAACAAATTACTCTACGTGCCCGTCC
ACAGTCAATCATCCAATCACCGACAACCGGTTATGTTGTATCCCGGTAAT
CCGCCAATCAAAAATGGGAAACCGATCGGATTACCACACCAACTGTTGCA
AGGCAACAAGAATGTCTTAGTTATGCCTAGCAACAAAATAGATGGTGCTT
TCACTACGGTTCGCATTCAAGGGACGTCTCAAAACACAGTACAAAGTCca
caaatgacgtcatcatcatcgAATGTCCGACATCCAGCAGCCAATGAACA
GCTAAGAAATGATCACGTGATAGGTGATAAGCCTATCAAAATAGATTGTA
TGGATGATAACGTCATTAAAAGAGAAGGAAAAGTTGAGGAAAAAGAGAAC
GAGAATAATAAACGAACCTTTCAACAAATAAGCCACGAGAATCATTTGCA
AAACAACGACTTGGTACCAGTGCACAAGAAGAAACGTGGTCGACCGCCCT
CGTTCGTCATCAATTCCGACGACAACGGCCGTTACCATGACGATGACGTA
TATTCCCATCCAGACGACGAACACGAACAACAAATTACTCTACGTGCCCG
TCCACAGTCAATCATCCAATCACCGACAACCGGTTATGTTGTATCCCGGT
AATCCGCCAATCAAAAATGGGAAACCGATCGGATTACCACACCAACTGTT
GCAAGGCAACAAGAATGTCTTAGTTATGCCTAGCAACAAAATAGATGGTG
CTTTCACTACGGTTCGCATTCAAGGGACGTCTCAAAACACAGTACAAAGT
CcacaaatgacgtcatcatcatcgAATGTCCGACATCCAGCAGCCAATGA
ACAGCTAAGAAATGATCACGTGATAGGTGATAAGCCTATCAAAATAGATT
GTATGGATGATAACGTCATTAAAAGAGAAGGAAAAGTTGAGGAAAAAGAG
AACGAGAATAATAAACGAACCTTTCAACAAATAAGCCACGAGAATCATTT
GCAAAACAACGACTTGGTACCAGTGCACAAGAAGAAACGTGGTCGACCGC
CCTCGTCGAGCAAACTCCTGCACAAAAGTTTCCGACCAGCAGACAACACT
AATCCTATCACCTTGGCTAACCGTGTCCTGAAAGATGCGTTCTATAAAAC
GAGCAAACTCCTGCACAAAAGTTTCCGACCAGCAGACAACACTAATCCTA
TCACCTTGGCTAACCGTGTCCTGAAAGATGCGTTCTATAAAAAGCAACAG
CAAATTCAGAACCAGCTACAAAGTTACATCGATGAACATCTATCCAAATG
TCCGGAATGGCCGGAAAACCCGGGACACTGGACGTCCGGTGAATTGTTCA
AATTCCTCTCGGTCACGGATTGTGCTTCTTTTGCCGACATTCTGAAAGAC
GAGAGCAACAGCAAATTCAGAACCAGCTACAAAGTTACATCGATGAACAT
CTATCCAAATGTCCGGAATGGCCGGAAAACCCGGGACACTGGACGTCCGG
TGAATTGTTCAAATTCCTCTCGGTCACGGATTGTGCTTCTTTTGCCGACA
TTCTGAAAGACGAGGAAATCGATGGAAAATCGTTTCTTTTGTTAACACGC
GAAGCGCTGATGGAATTCAAAGGTATCCGTTTAGGTCCAGCTCTCAAAAT
TGCCGGTTATTCAGCGTATCTTCGAGCTAGAAATCGAATCCTGAACATTG
AACGAGTTTCGAATCGTCAAGTACATAGAACTCCTTCTACAAATTCCCCA
AACGTATCACGTGCTCAGATGACGTCACAAGAGAGAAAAGATAACACTGC
ATTGGAGGAATTCCCGAATAGTATTCCAACTTTAAGCATAGTTATGCTTT
AAGAAATCGATGGAAAATCGTTTCTTTTGTTAACACGCGAAGCGCTGATG
GAATTCAAAGGTATCCGTTTAGGTCCAGCTCTCAAAATTGCCGGTTATTC
AGCGTATCTTCGAGCTAGAAATCGAATCCTGAACATTGAACGAGTTTCGA
ATCGTCAAGTACATAGAACTCCTTCTACAAATTCCCCAAACGTATCACGT
GCTCAGATGACGTCACAAGAGAGAAAAGATAACACTGCATTGGAGGAATT
CCCGAATAGTATTCCAACTTTAAGCATAGTTATGCTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000213_pilon | genome | sc0000213_pilon:433831..436875 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 808-1095:2758 |
| Aaloc | 649-807:1685 |
| Aaloc | 556-645:1134 |
| Aaloc | 1-552:1 |
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