XLOC_038155 (mRNA) -

Overview
NameXLOC_038155
Unique NameXLOC_038155
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000053_pilon:1565210..1566271+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038155 ID=XLOC_038155|Name=XLOC_038155|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1062bp|location=Sequence derived from alignment at sc0000053_pilon:1565210..1566271+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATTTCACCAAGGTTATTCATCTGTTTGGTTTTCTTGGCGACTGC ATATTCTGCTTGTTTGAATGACCGAGAAGCAGATACAACCATTGGTGCAG GGAATGTCAAGAAAGCTTTCAATGAAGACCAGGAGCAGATTGCCAGAGTT GTCAGTCAAACCAATGTGGAAAATTCATTGATCAATAATTCTGGTAAACT GGTGAACAAAGACGTCAAATCTGCCAGCAAAGCAAATATCCAAAGCCCTG GAAAGAAAGAATCCACCAATATTGATGAAGAAGATTCTTCTGTACTTACC AAAGATGAATTGTCCAAGAAAGGCGATTGTATGTGTATTTATAACAATTT GATCTGTGGGAATCACAGAGTTGGGTTTTGCCAAGACCGTCGACACGGGC GAAAAAGAGACTCGGAACTAACCAAGAAAGGCGATTGTATGTGCATgtat aataatttgatttgcGGTAACCGTAGGGTCGGGTTTTGCCAAGACCGTCG ACACGGGCGAAAAAGAGACTCGGAACTAACCAAGAAAGGTGATTGTATGT GCATgtataataatttgatttgcGGTAACCGTAGAGTCGGGTTTTGCCAA GACCGTCGACACGGACGAAAAAGAGACTCGGAACTAACAAAGAAAGGTGA TTGTATGTGCATgtataataatttgatttgcGGGAATCGTAGAGTCGGGT TTTGCCAGGACCGTCGACACGGGCGAAAAAGAGACTCGGAACTAACAAAG AAAGGTGATTGTATGTGCATgtataataatttgatttgcGGGAATCGTAG AGTCGGGTTTTGCCAACATCGCCGGCATGGGCGAAAAAGAGACTCGGAAC TAACAAAGAAAAGCGGTGGTTGTGTATGCATTTACAATAACCTGATCTGT GGAGGACAAATGCTTGGTTTTTGCCAAGATAGAAGAAATGGTCGAagaac tgctgactcagcaggaAATGACATTGGGGAGTTCAAGAGAAGTGATTGCA TGTGTTTTCACAATGAGCTTCTCTGTGGTGGACATCGTATTGGTTTCTGC CAAGAACACTGA

Coding sequence (CDS) from alignment at sc0000053_pilon:1565210..1566271+

>XLOC_038155 ID=XLOC_038155|Name=XLOC_038155|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2124bp|location=Sequence derived from alignment at sc0000053_pilon:1565210..1566271+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATTTCACCAAGGTTATTCATCTGTTTGGTTTTCTTGGCGACTGC
ATATTCTGCTTGTTTGAATGACCGAGAAGCAGATACAACCATTGGTGCAG
GGAATGTCAAGAAAGCTTTCAATGAAGACCAGGAGCAGATTGCCAGAGTT
GTCAGTCAAACCAATGTGGAAAATTCATTGATCAATAATTCTGGTAAACT
GGTGAACAAAGACGTCAAATCTGCCAGCAAAGCAAATATCCAAAGCCCTG
GAAAGAAAGAATCCACCAATATTGATGAAGAAGATTCTTCTGTACTTACC
AAAGATGAATTGTCCAAGAAAGGCGATTGTATGTGTATTTATAACAATTT
GATCTGTGGGAATCACAGAGTTGGGTTTTGCCAAGACCGTCGACACGGGC
GAAAAAGAGACTCGGAACTAACCAAGAAAGGCGATTGTATGTGCATgtat
aataatttgatttgcGGTAACCGTAGGGTCGGGTTTTGCCAAGACCGTCG
ACACGGGCGAAAAAGAGACTCGGAACTAACCAAGAAAGGTGATTGTATGT
GCATgtataataatttgatttgcGGTAACCGTAGAGTCGGGTTTTGCCAA
GACCGTCGACACGGACGAAAAAGAGACTCGGAACTAACAAAGAAAGGTGA
TTGTATGTGCATgtataataatttgatttgcGGGAATCGTAGAGTCGGGT
TTTGCCAGGACCGTCGACACGGGCGAAAAAGAGACTCGGAACTAACAAAG
AAAGGTGATTGTATGTGCATgtataataatttgatttgcGGGAATCGTAG
AGTCGGGTTTTGCCAACATCGCCGGCATGGGCGAAAAAGAGACTCGGAAC
TAACAAAGAAAAGCGGTGGTTGTGTATGCATTTACAATAACCTGATCTGT
GGAGGACAAATGCTTGGTTTTTGCCAAGATAGAAGAAATGGTCGAagaac
tgctgactcagcaggaAATGACATTGGGGAGTTCAAGAGAAGTGATTGCA
TGTGTTTTCACAATGAGCTTCTCTGTGGTGGACATCGTATTGGTTTCTGC
CAAGAACACTGAATGATGATTTCACCAAGGTTATTCATCTGTTTGGTTTT
CTTGGCGACTGCATATTCTGCTTGTTTGAATGACCGAGAAGCAGATACAA
CCATTGGTGCAGGGAATGTCAAGAAAGCTTTCAATGAAGACCAGGAGCAG
ATTGCCAGAGTTGTCAGTCAAACCAATGTGGAAAATTCATTGATCAATAA
TTCTGGTAAACTGGTGAACAAAGACGTCAAATCTGCCAGCAAAGCAAATA
TCCAAAGCCCTGGAAAGAAAGAATCCACCAATATTGATGAAGAAGATTCT
TCTGTACTTACCAAAGATGAATTGTCCAAGAAAGGCGATTGTATGTGTAT
TTATAACAATTTGATCTGTGGGAATCACAGAGTTGGGTTTTGCCAAGACC
GTCGACACGGGCGAAAAAGAGACTCGGAACTAACCAAGAAAGGCGATTGT
ATGTGCATgtataataatttgatttgcGGTAACCGTAGGGTCGGGTTTTG
CCAAGACCGTCGACACGGGCGAAAAAGAGACTCGGAACTAACCAAGAAAG
GTGATTGTATGTGCATgtataataatttgatttgcGGTAACCGTAGAGTC
GGGTTTTGCCAAGACCGTCGACACGGACGAAAAAGAGACTCGGAACTAAC
AAAGAAAGGTGATTGTATGTGCATgtataataatttgatttgcGGGAATC
GTAGAGTCGGGTTTTGCCAGGACCGTCGACACGGGCGAAAAAGAGACTCG
GAACTAACAAAGAAAGGTGATTGTATGTGCATgtataataatttgatttg
cGGGAATCGTAGAGTCGGGTTTTGCCAACATCGCCGGCATGGGCGAAAAA
GAGACTCGGAACTAACAAAGAAAAGCGGTGGTTGTGTATGCATTTACAAT
AACCTGATCTGTGGAGGACAAATGCTTGGTTTTTGCCAAGATAGAAGAAA
TGGTCGAagaactgctgactcagcaggaAATGACATTGGGGAGTTCAAGA
GAAGTGATTGCATGTGTTTTCACAATGAGCTTCTCTGTGGTGGACATCGT
ATTGGTTTCTGCCAAGAACACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038155XLOC_038155-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053_pilongenomesc0000053_pilon:1565210..1566271 +
Properties
Property NameValue
Aaloc1-1062:1