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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000053_pilon:1697504..1705727+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038151 ID=XLOC_038151|Name=XLOC_038151|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8224bp|location=Sequence derived from alignment at sc0000053_pilon:1697504..1705727+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATAAAATATTCAACAATATAATGCGAGGCTTTCATACATACAACAC
TCGACGATCAGCTGTACTCTCTAAACACGCAGCCGTTGCTACTAGCGACC
CTACAGCAACACAAGTTGGTATCCAATTACTTCAAAATGGTGGCAATGCT
GCGGACGCTGCTGTTGGAATTGCGGCTACATTGAACTTGGTAGATCCAGG
CTCGACTGGGATAGGTGGAGATGTGTTCGTCTTGTTTTATGACGCTAAAA
CGAAGAAAGTTAAAGGCTTAAATGCAAGGTAAGAGGCTAAATAGTACATG
TTGAATACCAGTTGAGTTGGATGAAAGCCTATATaggagactgttcatct
aacgtttccaaaccatctaaaaagaacgacaaatagcgagtttatgtatt
cgagataaatcgagggggacggtataaagcaaagttgacatgtctccaaa
atcaccgtcgactttgctcgacgacggtgaaaacaccaaaataccgtcgt
ctgtttaggtgagcaaaggcgacatagagccgtacatcgactatcgactt
tgttttgtatcatttcacttaccgtcgccctcgatatcctccgatacata
aactcggtaataactaataaaaagcgacaaaaagaatgacaaaccctaac
cctaactatcaaagaacgacatatttcgccatccacaaccccgaatgaaa
gtgactgtaccatttctacagattcattcctctttgtttgtcacgggaat
taactacatgtggtttaaaaaaacgcaaaattacgcatgcgtataagtct
ctatttgggtgagctggaaacattagatgaactaactTATAGATTGAtat
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgttcgttcgttttcgttcgttcgttcgttcgttcgttcg
ttcgtcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcttcgttcATTTATTTGTTCA
CCCATTCTTTCCTATTCTAATTTCAGCGGGAGATCATCATCGAACATGTC
TTTGGTTTACTTGAAAGCGAAAGGTATATCGCGCGCTCAAGGTCACATCC
GTATCCCATTGAACAGTGCGGACAGTGTGAACGTACCGGGCGCCGCCGCT
GGATGGGTGGATACTGTTGAATGCTTCGGAAGTGGAAAAGTAAGTTGTTC
AAATGTTATTATAAAAGTAAATGACTGAGATCTGTATCTTTTTTATGGTC
ATGATATTTATAGTCATAATAATAATTTGGCAATAATAAACGCTAGCCGT
GTCCTGCTAGATTTGAGTatggcctaaaagcctggagctgtataTTATAT
AGACTACCGTAATATCCagtttatgcttattttttatgTTATAGTTATCA
TTGAAAGAGATTCTCCAACCGGCCATTACATTATGTAAAGAAGGCTATCC
CGTCCACGAATTTTCTGCTTACCTACAACaaaaaaaCGAAGGAGTGCTGC
AACGTACACCGCACTCCTTTCCAGATGATATGCTACTAAATGGGAGAGCA
CCGCAACATGGAGATGTcgtgaaaaatacaaaacttgCCGGTATCTTTGA
GGTATATTTAATTTGCTTTGGAGAAGatcgtcttttttttttaagtttta
agagATACCGTTCTTACGGCTACCTATCCAAAAGTCtgttctgattggtt
gataatCACAAAATGATGATGTAATAATGATGTACTAAACCAATCAGTGC
TCAGAGAGGCGTTTGATTGTTGAGCAAACTTTTGGATAGCATAGTATAGA
AAAACTTAACAATAAGTCATTTTCAAGAACACCGAATAGTTTCTTAGATG
CACGCAAATAAcattaagtttcttttcaacaTTTTACCAAACACTGGCTC
CTTAAATCTCGATTTATAGAAATTGGCAGCCGAAGGAAAGAGGGGATTTT
ACGAAGGTAGTATTGCGCAATCGATAGTCGATGCTGTTCAAGGTTGTGGA
GGGTGCTTAACCATGCAAGACATGGCCTCACATACTAACACATTTGATGA
ACCTATATCCACTGACTACAAAGGTAACcgtgttgataaaatatattctt
ttttgagATATGTTAAGGAGGAAAGCCTTTATGCTGGCAAAGCAGTGCAG
aatgaacaaaagaatttctcaaaatttgtgctcTTGTAGTGCGGAAGGga
gaaaagttgttttttattttaatcaaaaaaGCTGTTTAAGTAAATGGTAA
TAAATGACCTAAATGAAAGTTCTTGGATCACAAGATAATTGGAAAGTTCA
TCAATCCATGGggattattattaatttttaaaaagtttatcctTATATTT
TTAAGCGCGAAACTCTTGTTTCTTTAACATGACACCAGGTGTTTGCAAAC
GGTTTCAATCTTTATAGTTTGAGCTTCTTCTCTTCGGTGTTTCTGTATAA
AAGATTAAGCCGTAAATATCACGAATCTATCTTTTTCGTCAGGTATAAGG
ATCTGGGAGATGCCTCCAAACGGACAAGGCCTCGTTGCGTTAATCGCTTT
TAATATACTAAAAGAAATGGACCAAATTCCCGGCGACCGACTCTCGGCAC
CATATATGCATCGGCTGATTGAGGCCGTACATCTCGGATTTGCGGACGGA
TTTCGACACATCGCTGACTCAGCAAAACCAGATGTTTTAAAGAGACTCTT
GTCTGACGAGCACGCGAAATCAAAAGCAGAATTGATACAAGAGGAAAAGT
AAGCGAATTTGATAGCCTGTTATTTGATAGAACAGGGTGATAAAAAGTCG
CCCActtgatttttctctttttatattCCCCGTATCGTATTTTCCTTAGT
AAATTTAGTGTGAAACTTAAAGGGTTATAGATTAgtatttcttacatttt
tgCGAGCATTTTTCATCCATTATTTCGCAGTTAAGGGCCTTATAGAATGA
CGATAATTGTTTTATCATGTTCGTAGAATTTTGCCCGATCGGTCAACATG
CAGGAAATGGAATGGAGAATtttctggaagtttttttaaattcaagctct
ctcctcctgcagtcaaaatacttatacgcatttacttttgactttcggat
taaacaagatatatacatataccaatcagtgaatttgctgaatgaaagtc
aaattacaatctgtctcctgtcttagacattcaggagattgattcatttt
tcgacccAAACAGTTTGTCCCCAATAATGAAcaaatgattaaaatgataa
taaatagtagaacaatgattgaatatggacaaaagtgattattgttggtg
gttgaattggcaacgaaattccactgtaactaAATTAATTTGACATTCGT
CATTCATTCAATATACTCTACTCCCAGCAAGAATGCTTAAAGATCCTGTG
TTATGGTACTTCGACAGtaagtacaaatatttttttctttgtgtactttt
ataagacttggttttattaatcttttatgtttaacctgtgttcttgttga
tacttacctggcactatttgggaaattattatcaaatattgaaagaaact
ttagtgaactatttttgaggaaatttcagtacactcaccatataggcggt
catcgaaaaattgttctattcacGTCACCCGCCCGCCGcatcatcaaatt
ttccgctgattttccggtgcggagatgcagaaaaaaatctgggaaaagca
acttgttcttttaaagtacagcttttttctcaattgcactgacgaccatc
gaaaaattgttttgctcgcgttaccacccgccccgcCCCGGGAATgtttt
gaccgcccgtccgcccgcatgcatttttagcacccgttgcgacgcgaaca
aagcattttttcgatgaccgccatatcatctaatttcatgtttcttattt
cccctttaagctttttatgaatgaagattcgtttaccttgacaacgcaat
attacctcgttattgctactattaccacgttacgtcatgatttcccatcc
ttctacacgatattgctgttacaactgcaagataaatggcatatcttttt
aatgtaaacaattttatccatgagatcccttatcatcccgttggaaaaag
tcctgaatgtacgctatttcctgttaatacctgcttccttctcatcaata
ttgcctcgttactgatactattaccacgttacgtcctatcatcttccatc
ctttacacaacgctgttacagcttctagattactggtaaatccatttaat
gtaaacaattttggatcacgatatcctttgttaaaccgttggaaaaGCTA
ctaagtacgttgttacctgtcaatttttggttcctgctcgttatgttcct
ggctcatagcatttcttatgctgtttggttctactatgtttcatttatat
ttcaaattggttgaaataaatatagttgcatgtcttttgactggtttagt
atctgtaactgtctgtaattgattctacctgaacacttttcctaatgaat
gtttttaagatttgtattttattctttgtaaaaagtaattcacattttta
gaaaacatatatgtttcatttatgttagcttattcattgatatctcaaag
aaaaaactgagaagaatcattctaactattccaaatcatttccaaacttt
tgctataaagcattaaaaagccttaattagcattaattagtttttagaag
catttgtactagcgggcggcagttagtgaaagctatggctagtaaTAACG
TAATCTTAAACTACGCGTATCGAAAAATCGGttctgttgtttttgttttt
tcagaatCGCTTCAGAGCATTACCACTATCCGACAATCAACAGTGGACAA
AACACTGTATATTTCTCAGTGGTGGACAGTGAAGGAAATGCTTGCTCATT
TATCAACAGTGTTTATAACTACCATGGGTCGGGAATCGTTCCGAAAGATT
GTGGCTTCGCCCTACAGGTGCGTTTGTACTGATAccgtacacgctttttt
ttttataagaatagcgtactttggttgagggtgagcattattcttatttt
tctattgttctaaacaataggcctattgttttaaacccgaaatctcaccc
tgatattcttatagaagttattcttataaaagaaaaagcgtgtatcttcA
AAACACTAGATACAGTTGACATTCTCTAATACACAAGTTGCAAAATTAAT
GTCCGAAGACAAATCaagcttttactcgaaattcttatgtgcttgttaca
tgacatttacttttgattgatttgaatttattgacactaataaagttatc
agccgtaagttgtaaagcatgggaataaaatcacgtgaactttttcaaGT
AATCACAATgctttgactgcattgatataattttgcaacccgtgtattcg
atttcaaattattttcataaaggATCGTATCGGATAGAGCGTCAATCTGC
CTAGTGAAAGTTAAGCCTTAATATAATTattggagcgtatcgaatagtat
aACTTCGAATGAAAGAGCTTCAAGCTTTTTTCCTTGTACTGTTATCATCA
GACTAGAGTCCACCtctgatttatttttgcttCCAGTTAAAGTAAATAAG
ACGATACTATCTAGAAATAAGCGAAGAGATATCGTCCGTTAGAGGGGTGG
TAAACGCAGGGAAACTGGGTGCTAGTCATTCTTCTTGACGTACAGTAACG
TCATTAGATAGTCGGATAGTTACCTGAAAGACTAAACTAACTTATATGTT
CACGCTTGCTACAATCAGTTCCagaatacttggcacaaaaggaaGATTCC
Ctacgaaattttataaccacaaacaatttggaagcgctctaaattaggtt
gaaagggtagaattttaacgctagacttaagatctgaggatccaaaagtt
caaaaatgctccgttagggcttgaaatatagcttagaaaccaataaatcc
cttccagattgaaatattcgatgaaatcaagttgcaagctcgaaattgac
attctcgctattttcgaaaaatggtaaaatagccaaaatagccaatatgt
tatggcactgattgtagtatGGGACGGAGTGCCAATAGATTATTTCAAAA
CCCCATTTAAGTTCATTAAACATTATAATAAAGGAACAAAAATAGcttcc
aattttgaaaaaaaaaaacactggtcACTTAAGTTATGATTTTCTGTTCT
TCTCCAAAAAGGACTGTATCGTATGGATTTGTTGCATGCTCTAAGTAATT
CCAAAAACACCGGGCAATTTATCAACTCCACCCAGTTCACCAAGATCCCA
GTTCTCCGGGTTACATTTCCATGAGGGTGTAGCAATGATTTTCTCTTAAT
TAGGGTTCAGTTATGTAAATAAAGTTGTTTGTAGCCGCTGTCACACGAAA
ATCATTTATGGTAAATTTACTCCAGACACATAGAACTCTATTGGGATTtc
ccagaaatagtccgtgccccctccCTGTTggggatatcggatatccaggg
agttaacgatttttattcaaaagtgcATATTCAGGGGATTAactatctac
aagggagcgaaTATCCAgtggtaagcatctttataagagaggatatccag
gggtttgagaatatttttaagagtctttactaataaagtaggatatccag
ggggttcgatacttcgaaaaatcaatatcctcaacagtgggggcaatttc
tttttctggaaaagcccattgtttCAATAGTACGTCGTCAAATCTAAATC
TATAAGTAGGACATACTAGATTGTTGGAAGATTTGATGAGCATAAATGTG
ATCCAATTTTTATTCAGAAAATAGTTAAATCTAACAAAAGATAGTTGGGG
ATTACTAGAATCTTGAAAAGAGAGAGAGAAGCTGACCCCccgatatcatc
ggaccgggccctatcctgggatagtttcctacccctagatagggaaatca
cagcgcttacgatacattgtactctgtgctcgcgacacatcagagccgtg
ctgtatcTAGAATCTTGGAAAATTGATGTTAATATCCAATTTTTTATTCA
GAGTCGAGGTGGTAATTTCTCTCTGGAAGAGGATCATCCGAACTGCGTTG
GACCAAACAAGCGATCATACCATACGATAATACCTGGAATGGCCACACAT
GCAGATACAGGAGAACTGTTCGCTTGTTTTGGTAATATGGGAGCTTTCAT
GCAACCTCAAGGTCACGTGcaggtaaaatgtttttttattgcttaatgta
ttcacaggaaaaaatctgtGATTATTCATGACGGTTTTTTGGTACCTTGT
TACACTTATTTAACTACTTAGGGTATTAACGTGAATTGATCATCCTCGCG
TAAGTTACAACTATTTGACAAAATTGAGCCAATCGAAAATACTGCCTTTC
GCGTTAATAAATTGTGGCTCTCATTTTTTCCGTGATAAATACTTAATTAC
TGAAGAAAGATAATTCTGTTAAAAGTGTGATAAGCTATATCCAGGGCTGC
ATATGGATTTTCACGAAAGATtgaattaaaaagttttattcgacctgaaa
tacacgttttttacaagGAGAAACTAAATACGATAAcgtataaggcttcg
attgccaaaatattaagaacaagttaaggatATTTTAAAGTCCACCACga
tttctcaagaaaatggataaaaatacttacaaaatggtaaaaataacatG
TTGAGTGCATTTTTAGGGTTAAAGTTCAAGAGGttaatttcttacaaaaa
agacGTGTAGAGCTGACATGGTTATcacagaaaaaagataatcaTTGTtg
attaagaaacttttttttcagttaatGACGAACTTGATTGACCATCAGAT
GGATCCACAACTTGCCATTGATATGCCTCGATTCAATATCATTTACCCTG
ACAACCCTCAAACAAGACCAACTGTTCATATCGAAGACGGCGTCAGCCAA
GAGACTATGGACGAACTTACTAGATATGGACATAACGTGAAACTGACCAC
GGGTTGGGATCGAATCATGTTTGGACGTgcgcaaattattttgaataagc
GAGACACGTACGGTAACCGAGTGTTGTGGTCTGGTTCAGAGAGTCGCACT
GATGGATGTGCAATGGGCTATTAA Coding sequence (CDS) from alignment at sc0000053_pilon:1697504..1705727+ >XLOC_038151 ID=XLOC_038151|Name=XLOC_038151|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3390bp|location=Sequence derived from alignment at sc0000053_pilon:1697504..1705727+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATAAAATATTCAACAATATAATGCGAGGCTTTCATACATACAACAC
TCGACGATCAGCTGTACTCTCTAAACACGCAGCCGTTGCTACTAGCGACC
CTACAGCAACACAAGTTGGTATCCAATTACTTCAAAATGGTGGCAATGCT
GCGGACGCTGCTGTTGGAATTGCGGCTACATTGAACTTGGTAGATCCAGG
CTCGACTGGGATAGGTGGAGATGTGTTCGTCTTGTTTTATGACGCTAAAA
CGAAGAAAGTTAAAGGCTTAAATGCAAGATGAATAAAATATTCAACAATA
TAATGCGAGGCTTTCATACATACAACACTCGACGATCAGCTGTACTCTCT
AAACACGCAGCCGTTGCTACTAGCGACCCTACAGCAACACAAGTTGGTAT
CCAATTACTTCAAAATGGTGGCAATGCTGCGGACGCTGCTGTTGGAATTG
CGGCTACATTGAACTTGGTAGATCCAGGCTCGACTGGGATAGGTGGAGAT
GTGTTCGTCTTGTTTTATGACGCTAAAACGAAGAAAGTTAAAGGCTTAAA
TGCAAGCGGGAGATCATCATCGAACATGTCTTTGGTTTACTTGAAAGCGA
AAGGTATATCGCGCGCTCAAGGTCACATCCGTATCCCATTGAACAGTGCG
GACAGTGTGAACGTACCGGGCGCCGCCGCTGGATGGGTGGATACTGTTGA
ATGCTTCGGAAGTGGAAAACGGGAGATCATCATCGAACATGTCTTTGGTT
TACTTGAAAGCGAAAGGTATATCGCGCGCTCAAGGTCACATCCGTATCCC
ATTGAACAGTGCGGACAGTGTGAACGTACCGGGCGCCGCCGCTGGATGGG
TGGATACTGTTGAATGCTTCGGAAGTGGAAAATTATCATTGAAAGAGATT
CTCCAACCGGCCATTACATTATGTAAAGAAGGCTATCCCGTCCACGAATT
TTCTGCTTACCTACAACaaaaaaaCGAAGGAGTGCTGCAACGTACACCGC
ACTCCTTTCCAGATGATATGCTACTAAATGGGAGAGCACCGCAACATGGA
GATGTcgtgaaaaatacaaaacttgCCGGTATCTTTGAGTTATCATTGAA
AGAGATTCTCCAACCGGCCATTACATTATGTAAAGAAGGCTATCCCGTCC
ACGAATTTTCTGCTTACCTACAACaaaaaaaCGAAGGAGTGCTGCAACGT
ACACCGCACTCCTTTCCAGATGATATGCTACTAAATGGGAGAGCACCGCA
ACATGGAGATGTcgtgaaaaatacaaaacttgCCGGTATCTTTGAGAAAT
TGGCAGCCGAAGGAAAGAGGGGATTTTACGAAGGTAGTATTGCGCAATCG
ATAGTCGATGCTGTTCAAGGTTGTGGAGGGTGCTTAACCATGCAAGACAT
GGCCTCACATACTAACACATTTGATGAACCTATATCCACTGACTACAAAG
AAATTGGCAGCCGAAGGAAAGAGGGGATTTTACGAAGGTAGTATTGCGCA
ATCGATAGTCGATGCTGTTCAAGGTTGTGGAGGGTGCTTAACCATGCAAG
ACATGGCCTCACATACTAACACATTTGATGAACCTATATCCACTGACTAC
AAAGGTATAAGGATCTGGGAGATGCCTCCAAACGGACAAGGCCTCGTTGC
GTTAATCGCTTTTAATATACTAAAAGAAATGGACCAAATTCCCGGCGACC
GACTCTCGGCACCATATATGCATCGGCTGATTGAGGCCGTACATCTCGGA
TTTGCGGACGGATTTCGACACATCGCTGACTCAGCAAAACCAGATGTTTT
AAAGAGACTCTTGTCTGACGAGCACGCGAAATCAAAAGCAGAATTGATAC
AAGAGGAAAAGTATAAGGATCTGGGAGATGCCTCCAAACGGACAAGGCCT
CGTTGCGTTAATCGCTTTTAATATACTAAAAGAAATGGACCAAATTCCCG
GCGACCGACTCTCGGCACCATATATGCATCGGCTGATTGAGGCCGTACAT
CTCGGATTTGCGGACGGATTTCGACACATCGCTGACTCAGCAAAACCAGA
TGTTTTAAAGAGACTCTTGTCTGACGAGCACGCGAAATCAAAAGCAGAAT
TGATACAAGAGGAAAAaatCGCTTCAGAGCATTACCACTATCCGACAATC
AACAGTGGACAAAACACTGTATATTTCTCAGTGGTGGACAGTGAAGGAAA
TGCTTGCTCATTTATCAACAGTGTTTATAACTACCATGGGTCGGGAATCG
TTCCGAAAGATTGTGGCTTCGCCCTACAGaatCGCTTCAGAGCATTACCA
CTATCCGACAATCAACAGTGGACAAAACACTGTATATTTCTCAGTGGTGG
ACAGTGAAGGAAATGCTTGCTCATTTATCAACAGTGTTTATAACTACCAT
GGGTCGGGAATCGTTCCGAAAGATTGTGGCTTCGCCCTACAGAGTCGAGG
TGGTAATTTCTCTCTGGAAGAGGATCATCCGAACTGCGTTGGACCAAACA
AGCGATCATACCATACGATAATACCTGGAATGGCCACACATGCAGATACA
GGAGAACTGTTCGCTTGTTTTGGTAATATGGGAGCTTTCATGCAACCTCA
AGGTCACGTGcagAGTCGAGGTGGTAATTTCTCTCTGGAAGAGGATCATC
CGAACTGCGTTGGACCAAACAAGCGATCATACCATACGATAATACCTGGA
ATGGCCACACATGCAGATACAGGAGAACTGTTCGCTTGTTTTGGTAATAT
GGGAGCTTTCATGCAACCTCAAGGTCACGTGcagttaatGACGAACTTGA
TTGACCATCAGATGGATCCACAACTTGCCATTGATATGCCTCGATTCAAT
ATCATTTACCCTGACAACCCTCAAACAAGACCAACTGTTCATATCGAAGA
CGGCGTCAGCCAAGAGACTATGGACGAACTTACTAGATATGGACATAACG
TGAAACTGACCACGGGTTGGGATCGAATCATGTTTGGACGTgcgcaaatt
attttgaataagcGAGACACGTACGGTAACCGAGTGTTGTGGTCTGGTTC
AGAGAGTCGCACTGATGGATGTGCAATGGGCTATTAAttaatGACGAACT
TGATTGACCATCAGATGGATCCACAACTTGCCATTGATATGCCTCGATTC
AATATCATTTACCCTGACAACCCTCAAACAAGACCAACTGTTCATATCGA
AGACGGCGTCAGCCAAGAGACTATGGACGAACTTACTAGATATGGACATA
ACGTGAAACTGACCACGGGTTGGGATCGAATCATGTTTGGACGTgcgcaa
attattttgaataagcGAGACACGTACGGTAACCGAGTGTTGTGGTCTGG
TTCAGAGAGTCGCACTGATGGATGTGCAATGGGCTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053_pilon | genome | sc0000053_pilon:1697504..1705727 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1393-1695:7922 |
| Aaloc | 1222-1392:7152 |
| Aaloc | 1060-1221:4906 |
| Aaloc | 805-1056:2595 |
| Aaloc | 649-801:2020 |
| Aaloc | 442-648:1495 |
| Aaloc | 280-441:1128 |
| Aaloc | 1-276:1 |
|
