XLOC_038150 (mRNA) -

Overview
NameXLOC_038150
Unique NameXLOC_038150
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000053_pilon:1711090..1712250+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038150 ID=XLOC_038150|Name=XLOC_038150|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1161bp|location=Sequence derived from alignment at sc0000053_pilon:1711090..1712250+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGAGGCCAAGGAAGATGCAGGCCAACAAGATGCTTATGATTATAA AAGATTACATAGTTATCCTCTTATAAGGGTGAGTAAGGGAATTAGTTTTA GCATGAACTAATTCTAGAGGAATTCACAGCACAAGGGTAATGATTAGCTG TTTGTCCAGAATTAATTTTGCTTAGCATTCTAAAACAACCCCAACCACAT TATTTATGCTTCGGgttttatatttctttacagTATCCTTTTTAACGTCT ATCGTTTGTCGTAGTTACTTTAAAACGAAATGTTTCGATGATTCTAGAAT TTGAATCTTAAAACACCTAGTTAGTTAAAAAGCAATTTGAATTCACAGAA GCATTAGTGTAAAAATTGTTACTTGTTGGTAATTGATTTTGATGCAAAAA GTTTTTGGTAATAATATCTTAATTTAGTTAGAAATTTTAAGCATTGTTCT ACAATGATTTCTCTTTTAGTATTCGGATATGAGTGAGGAGATGCGAGTTG AAGCAATGGAGTTGTGTGTCACAGCTTGTGAAAAATTTGCAGCAAATAAC GAGGTAATCTTtctcttgaaattgaaaatcatcaaaattaccTAATTCTC CATTCATTTTAAGCGACTGACCAATTTTCAATTCCTgctaaaaaacatta aaagtttTAACCTATTTGAAGTTCAGATAAATAGTGCTCTGCGTAGCATG TACATCATAATTaaattttagctgaaatttttaCAAGTTGCAATCCCTAT GAAAAAACTGTGAAATTTAttacctttcttttgatattgtaaTTAATTAA TGTGCAAGAGTAATCAACGCTTAGGATTTTGGGATTGAAGGTCGTACAAA GAATAAATTTGTGCagatttgttactatttttagaTTTGCCGCAAAGTGC TTTTGGtttacaaaagaaaatgttcatAGGGTTTTTACTCAGGTTCAGTG GAAAACATCACATTTAACAAAAgggtatttcaaaatttttgtttaggCTG CAGCCAAAATGATTAAGGAGAGTCTGGACAAAAAGTTTGGTTCATCTTGG CATTGTGTGGTAGGTGAAGGATATGGATTCGATATTACACACGAAGTGAA AAACCTCTTGTATTTATACTTTGGTGGATCCATTGCTGTCACTCTTTGGA AATGCTCctag

Coding sequence (CDS) from alignment at sc0000053_pilon:1711090..1712250+

>XLOC_038150 ID=XLOC_038150|Name=XLOC_038150|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000053_pilon:1711090..1712250+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAGAGGCCAAGGAAGATGCAGGCCAACAAGATGCTTATGATTATAA
AAGATTACATAGTTATCCTCTTATAAGGATGACAGAGGCCAAGGAAGATG
CAGGCCAACAAGATGCTTATGATTATAAAAGATTACATAGTTATCCTCTT
ATAAGGTATTCGGATATGAGTGAGGAGATGCGAGTTGAAGCAATGGAGTT
GTGTGTCACAGCTTGTGAAAAATTTGCAGCAAATAACGAGTATTCGGATA
TGAGTGAGGAGATGCGAGTTGAAGCAATGGAGTTGTGTGTCACAGCTTGT
GAAAAATTTGCAGCAAATAACGAGgCTGCAGCCAAAATGATTAAGGAGAG
TCTGGACAAAAAGTTTGGTTCATCTTGGCATTGTGTGGTAGGTGAAGGAT
ATGGATTCGATATTACACACGAAGTGAAAAACCTCTTGTATTTATACTTT
GGTGGATCCATTGCTGTCACTCTTTGGAAATGCTCctaggCTGCAGCCAA
AATGATTAAGGAGAGTCTGGACAAAAAGTTTGGTTCATCTTGGCATTGTG
TGGTAGGTGAAGGATATGGATTCGATATTACACACGAAGTGAAAAACCTC
TTGTATTTATACTTTGGTGGATCCATTGCTGTCACTCTTTGGAAATGCTC
ctag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038150XLOC_038150-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053_pilongenomesc0000053_pilon:1711090..1712250 +
Properties
Property NameValue
Aaloc163-327:997
Aaloc79-162:470
Aaloc1-78:1