|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000053_pilon:1765793..1768910+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038148 ID=XLOC_038148|Name=XLOC_038148|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3118bp|location=Sequence derived from alignment at sc0000053_pilon:1765793..1768910+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAGTTTGGCGATTCTTTTGGTCGCTACCATCATTGGTCAATCTTA
CGCAGGTATTGTTTATTGTTGTTATtcaatcttattcaatttttctttca
aaaatccgCTCGATTTTCTTAAGACCTTCTAGGTCCCATTGATATTTTTT
GGGGGGTTTAGGGAGGTAATTcaaggaaatttttcaaaattattaaaacT
GCAATATTCAATTGTCAAGACATTTGTTATCACTAAGGAAAATTTAATGT
GTCAAACATTGTAAAACCTGGGAGAGCGGGGTCAAATCAGTGAATAACAT
TTCTTCCAACAACCAAGGGATCCTAAGATGTTATAGCTTCCATATAAAGA
CAACTTTGTAAGATTTTCAACGTCTAAAAATTGTGTATTCTAACGTAACT
CCACAATAAGATAACTCGAAAAATAAACTAATTCATtacattttcttaaa
tttcaggTTATCTTGGGTGCTATAGGAAACCATGCGTCGCTGCAAACACT
GACCGATGTGAAAATAAACCATATGGACGATACCAATGTATCTGCAAAGA
GGGATTCTCTGGTCGCAGATGTGAAACAAGTAAGTCACCTTGCTTTATGG
ATGAGCTGTGAAGTGTTTGAATTCTATGATACACATGAATTAAAAAGATT
ATTATAGTTTATGTATCGGATGTCAAACAATTACGTCATTCCTTATTtac
acaaaaattattttagctCTGGTTTCTAATTGTTATTGTGAATTATGAAG
TGGGCAGAAAGTTTGCTAACTTTGTGTCTGCTCTAATAATAAGAATAAAT
AGGTCAGAATGTCACCATGCCAGTGTGGTGAATATAAGAACAGATTTCTA
TGttttattcaaagaaatttaaaaccTTACGGCGAGTCTTTCAAAGGGGT
CATCAGacagtttgatattttttctggCCTGTAAAATCATTCCCACAATC
CTGAACGAAAGCTCTGAATCCCGGGGGAGGATACTTAGACAAATGGAGTG
TCTAGTATTTGGCGCCCTTAACAATACCATaattggatttccaaagtccc
ggtaagggtaggaaaaaagtaatataatattttagtaaaatagtcagaac
cttttatctttctttcttcTATCATAACATTATCAGCTGTAGTCAATGTG
TTAGACATGATGTTTTGTCTTATTGctaatgttttaaaatgatttaatac
tttgggtttttttttctgaaatagaTGACAATGATTGCCGAGGTGTCAAA
TGCTTAAACGGAGGAACCTGCGAAGACGGAATTGCTTCCTTCACTTGCAA
ATGCAAACGTGGATTCAATGGAAAATTCTGTAAGAACAACATCGATGATT
GCCGAGATGTCAAATGCTTAAACGGAGGAACCTGCGAAGATGGAATTGCT
TCTTTCACTTGCAAATGCAAGAACGGATTCAATGGAGAATTCTGTAAAAA
CAACATCGATGATTGCCAAGGTGTCAAATGCTTAAACGGAGGAACCTGCG
AAGACGGAATCGCTTCTTTCACTTGCAAATGCAAACGTGGATTCAATGGA
GAATTCTGTAAAAACAACATCGATGATTGCCGAGGTGTGAAATGCTTAAA
CGGAGGAACCTGCGAAGACGGAATTGCTTCTTTCACTTGCAAATGCAAGA
ACGGATTCAATGGAGAATTCTGTAAAAACAACATCGATGATTGCCGAGGT
GTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCAC
TTGCAAATGCAAGAATGGATTCAATGgaaaattctgtaaaaacaacATCG
ATGATTGCCGAGGTGTCAAATGCTTAAACGGTGGAACCTGCGAAGACGGA
ATCGCTTCTTTCACTTGCAAATGCAAGAATGGATTCAATGgaaaattctg
taaaaacaacATCGATGATTGCCAAGGTGTCAGATGTCAAAACGGAGGAA
CCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGAATGGATTC
AATGgaaaattctgtaaaaacaacATCGATGATTGCCGAGATGTCAAATG
CTTAAACGGTGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAAT
GCAAGAATGGATTCAATGGTAAATTCTGCCAGAACAACATTGATGATTGC
CGAGGTGTCACTTGCCAAAATGAAGGAAGCTGCGAAGATGGAATCGCTTC
TTTCACTTGCAAATGCAAAAACGGATTCAATGGAAAATTCTGCCAAAATA
ACATTGACGATTGCAAGCGCGTCAGATGTCTTAATGGGGGAACTTGCAAA
GATGGGATTGCTTCTTTTACTTGTCAATGCAAGCCTGGATTCTCCGGAAA
ATTCTgtcaaggtttgttttttcatattgttaccaatatttttttgctcC
AAGTCATCTTGAAATATTAAAAGCAAATTCAATGgttgataaaaaatgaa
gcaaaactTGTAACTCGGAACCCATTATTTAATGTACCAAGAGACCCGGA
AATTGTTTTATTTCCTATGCCGCTATACAAATTCTTGTTGAAAGTTGTAT
TTCCCGAAATCAGTTCTTTTAAGTGATTTATTGCAATTTGTTTTTCTTCG
CCAGTTCCATCATGTCACCCTAACCCATGTCAGAatggtggaaaatgttt
gaaacatggaaaagccATCAGATGTTGGTGTAAACAAGGCTATGAAGGAA
GATTCTGTGAAACAAGTGTCAAAGGtaacatttaaaatatcaaaaaatca
tttccttTCGATGATTAAAGTTGCaattaaaatacaacaattttaatttt
gaaaatttttcttaaaaaatcttatttgagaaaatgtcgGAATTCTTTgg
aattctttttctttgctCTTACAAAATCATTGGAAATCAACTATTTAGAG
GCTGTATTAACAATTACTTTACGAAGTACTGAAATACATAATAAAGTTAA
CAAATCTTTCATTTGCCAGAATGCAATTACCACTGCAGCAGCCAGCGTGG
ATGGTGCCGTATTATGGGAACCGACGGCCGTATCTATGACAACTATTGTC
AATTCGAGCGTGCTCAATGCAAAAATAAATCACTTCGAATCAAGAAGAAA
CTCTGTGGTTACTggtaa Coding sequence (CDS) from alignment at sc0000053_pilon:1765793..1768910+ >XLOC_038148 ID=XLOC_038148|Name=XLOC_038148|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2256bp|location=Sequence derived from alignment at sc0000053_pilon:1765793..1768910+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAGTTTGGCGATTCTTTTGGTCGCTACCATCATTGGTCAATCTTA
CGCAGATGAGAAGTTTGGCGATTCTTTTGGTCGCTACCATCATTGGTCAA
TCTTACGCAGgTTATCTTGGGTGCTATAGGAAACCATGCGTCGCTGCAAA
CACTGACCGATGTGAAAATAAACCATATGGACGATACCAATGTATCTGCA
AAGAGGGATTCTCTGGTCGCAGATGTGAAACAAgTTATCTTGGGTGCTAT
AGGAAACCATGCGTCGCTGCAAACACTGACCGATGTGAAAATAAACCATA
TGGACGATACCAATGTATCTGCAAAGAGGGATTCTCTGGTCGCAGATGTG
AAACAAaTGACAATGATTGCCGAGaTGACAATGATTGCCGAGGTGTCAAA
TGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAA
ATGCAAGAATGGATTCAATGgaaaattctgtaaaaacaacATCGATGATT
GCCGAGGTGTCAAATGCTTAAACGGTGGAACCTGCGAAGACGGAATCGCT
TCTTTCACTTGCAAATGCAAGAATGGATTCAATGgaaaattctgtaaaaa
caacATCGATGATTGCCAAGGTGTCAGATGTCAAAACGGAGGAACCTGCG
AAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGAATGGATTCAATGga
aaattctgtaaaaacaacATCGATGATTGCCGAGATGTCAAATGCTTAAA
CGGTGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGA
ATGGATTCAATGGTAAATTCTGCCAGAACAACATTGATGATTGCCGAGGT
GTCACTTGCCAAAATGAAGGAAGCTGCGAAGATGGAATCGCTTCTTTCAC
TTGCAAATGCAAAAACGGATTCAATGGAAAATTCTGCCAAAATAACATTG
ACGATTGCAAGCGCGTCAGATGTCTTAATGGGGGAACTTGCAAAGATGGG
ATTGCTTCTTTTACTTGTCAATGCAAGCCTGGATTCTCCGGAAAATTCTg
tcaagGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCTT
CTTTCACTTGCAAATGCAAGAATGGATTCAATGgaaaattctgtaaaaac
aacATCGATGATTGCCGAGGTGTCAAATGCTTAAACGGTGGAACCTGCGA
AGACGGAATCGCTTCTTTCACTTGCAAATGCAAGAATGGATTCAATGgaa
aattctgtaaaaacaacATCGATGATTGCCAAGGTGTCAGATGTCAAAAC
GGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGAA
TGGATTCAATGgaaaattctgtaaaaacaacATCGATGATTGCCGAGATG
TCAAATGCTTAAACGGTGGAACCTGCGAAGACGGAATCGCTTCTTTCACT
TGCAAATGCAAGAATGGATTCAATGGTAAATTCTGCCAGAACAACATTGA
TGATTGCCGAGGTGTCACTTGCCAAAATGAAGGAAGCTGCGAAGATGGAA
TCGCTTCTTTCACTTGCAAATGCAAAAACGGATTCAATGGAAAATTCTGC
CAAAATAACATTGACGATTGCAAGCGCGTCAGATGTCTTAATGGGGGAAC
TTGCAAAGATGGGATTGCTTCTTTTACTTGTCAATGCAAGCCTGGATTCT
CCGGAAAATTCTgtcaagTTCCATCATGTCACCCTAACCCATGTCAGAat
ggtggaaaatgtttgaaacatggaaaagccATCAGATGTTGGTGTAAACA
AGGCTATGAAGGAAGATTCTGTGAAACAAGTGTCAAAGTTCCATCATGTC
ACCCTAACCCATGTCAGAatggtggaaaatgtttgaaacatggaaaagcc
ATCAGATGTTGGTGTAAACAAGGCTATGAAGGAAGATTCTGTGAAACAAG
TGTCAAAGAATGCAATTACCACTGCAGCAGCCAGCGTGGATGGTGCCGTA
TTATGGGAACCGACGGCCGTATCTATGACAACTATTGTCAATTCGAGCGT
GCTCAATGCAAAAATAAATCACTTCGAATCAAGAAGAAACTCTGTGGTTA
CTggtaaAATGCAATTACCACTGCAGCAGCCAGCGTGGATGGTGCCGTAT
TATGGGAACCGACGGCCGTATCTATGACAACTATTGTCAATTCGAGCGTG
CTCAATGCAAAAATAAATCACTTCGAATCAAGAAGAAACTCTGTGGTTAC
Tggtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053_pilon | genome | sc0000053_pilon:1765793..1768910 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 982-1128:2972 |
| Aaloc | 862-978:2607 |
| Aaloc | 199-858:1701 |
| Aaloc | 181-195:1227 |
| Aaloc | 58-177:459 |
| Aaloc | 1-54:1 |
|
