XLOC_038144 (mRNA) -

Overview
NameXLOC_038144
Unique NameXLOC_038144
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000213_pilon:423728..424690-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038144 ID=XLOC_038144|Name=XLOC_038144|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=963bp|location=Sequence derived from alignment at sc0000213_pilon:423728..424690- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAGATTTGTTCTATCAATATCTTTGGTGGTTCTTCTATTTGGTAT AACTCTCGGAGAACAGATTCGTCCGACTCCAGTGATCCACAGATGCCCTA CAGCAAAGCAGAAGTGGAGATATTGTAAGATAACCTTTCAGTATTTGCCA ATCACGTGAATGTAGCACAAGAACCACAGGCGGCTTTTTGCTGTTGAAGA CTCTACCGACTGTTTATTTGCTATCCGCAACTACATCGAGGTTTTTGTGA TACATGATATACTGTTCTACTGTTCTTTGGTGGATAACTTTCACGACATT TGCAAATTCTTTCCACTTTTACGCGATTTTTGCCAGAGGACATTGATTGG TAAAATTTAGTCTACACAAAAGTTTTAAATCTAAAATAGGGACTCTCCTA AGGCTTCAGACGGTTAAGTTTTGAATAACTTTTAATTGTATAGCTTTTTG TGCACATGTTTGTAGGTGGCGGAGAGAGATATGATCGAGTTGCAGAATTT TGTTGTGATGGTGTGAAACTGGCAAAAGAACCTTTCAAACGGTGCTGTGG GTGAGTTAATGTTTGTAAGAATCATTTTCTTTACCCAGCTGGCACACAAC GTTGTTTCAACGTTCATCTAACGTTATATGGACGTTGTGAACGTTAGATA AACGTTGAAACAACGTTGTGTGCCAGCTGGGTTAGCTTTTAGAATTAAAC CACTAATTCGCAATATCAAGATGTTTGTTTTTAATGTTTCATTACGATAT ATTTCGAATTATTACAATTTCAGAAAGCGTCTTTATGATATCGAATCAGA GCGTTGTCGAAATGGTTTCGTCTTGATCAAGGAAAAGAGGTGCAGAGGAC GAACCTACGATCCTAAGGATAGTTTTTGCCACCGATGCCAAGTGTTCTCC CATAATGAGTTTGTGTATTGCGATGGCAGCCTTTATCCTAAGACATCCCG AAAACAAATTTAA

Coding sequence (CDS) from alignment at sc0000213_pilon:423728..424690-

>XLOC_038144 ID=XLOC_038144|Name=XLOC_038144|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=798bp|location=Sequence derived from alignment at sc0000213_pilon:423728..424690- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAGATTTGTTCTATCAATATCTTTGGTGGTTCTTCTATTTGGTAT
AACTCTCGGAGAACAGATTCGTCCGACTCCAGTGATCCACAGATGCCCTA
CAGCAAAGCAGAAGTGGAGATATTATGGCTAGATTTGTTCTATCAATATC
TTTGGTGGTTCTTCTATTTGGTATAACTCTCGGAGAACAGATTCGTCCGA
CTCCAGTGATCCACAGATGCCCTACAGCAAAGCAGAAGTGGAGATATTGT
GGCGGAGAGAGATATGATCGAGTTGCAGAATTTTGTTGTGATGGTGTGAA
ACTGGCAAAAGAACCTTTCAAACGGTGCTGTGGGTGGCGGAGAGAGATAT
GATCGAGTTGCAGAATTTTGTTGTGATGGTGTGAAACTGGCAAAAGAACC
TTTCAAACGGTGCTGTGGAAAGCGTCTTTATGATATCGAATCAGAGCGTT
GTCGAAATGGTTTCGTCTTGATCAAGGAAAAGAGGTGCAGAGGACGAACC
TACGATCCTAAGGATAGTTTTTGCCACCGATGCCAAGTGTTCTCCCATAA
TGAGTTTGTGTATTGCGATGGCAGCCTTTATCCTAAGACATCCCGAAAAC
AAATTTAAAAAGCGTCTTTATGATATCGAATCAGAGCGTTGTCGAAATGG
TTTCGTCTTGATCAAGGAAAAGAGGTGCAGAGGACGAACCTACGATCCTA
AGGATAGTTTTTGCCACCGATGCCAAGTGTTCTCCCATAATGAGTTTGTG
TATTGCGATGGCAGCCTTTATCCTAAGACATCCCGAAAACAAATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038144XLOC_038144-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000213_pilongenomesc0000213_pilon:423728..424690 -
Properties
Property NameValue
Aaloc211-399:190
Aaloc127-207:497
Aaloc1-123:964