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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:1808118..1810306+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038143 ID=XLOC_038143|Name=XLOC_038143|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2189bp|location=Sequence derived from alignment at sc0000010_pilon:1808118..1810306+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTCGCCCAAGGCGACTCCAGGTCAACTGGAAGAGCTTAGTGGGAGC
TGCACATGGTAAAAGAACGCTAAAACTCCGACCAAACCAGCAGGACCTTT
ACACGTGTCCTATAAAGCTATGTTTACATGGTGACTTCAAAAGTTGCAGA
GGGTTGAGAAAGCATATCAACACTAAACATCCTTGGTACTATTACTTTGA
CGAGCAGCCTGAAGTTAAACGTGAGGACATGACTGACTTTCCTGTTGCAC
CAAAGAGAGCATCTACTGCCGGTAAGCCGTCTTTTTCATTGGATGAAGGA
ATTGGAAGAGACTTTTTAACTTGGCTTGGAACATCTTGTGGAGGTGGAAA
AAACAATAAGGAGGCTAGACAGATTGGCAAACGagctatgaaatatttta
tgcatGCCATGGGTAACAATGAAAATGACATTGACCTAACTAACGAATTT
GTTGACTGTTGTTTGTCATCTGCTTCAATTTTCATATCGTTTCTAAAAGT
GATAGAAGAAGAATGGAAAGTTGGTCCCTCCGGTGCTGTAAACTACGTAA
AGTGTATTACAGATTTCATTGATTTTCGAAAAGCAAATGGAGTTTCTGAC
AATACTCTTCGTTGCTTCACAGTTGTGGAAGTTTATCTCAGGCGAGCAAA
TGAAAACCTTCGAAAGAAAAAGAACTTAGACTGTAATCGAAACCTCGACT
TGGAAACCCTTATCGCCAGAAACAGCTGGGCAACGTTGGAGGAAATGGAA
GTGGTCATACCTTTCCACATGAAACAGTTCAAAAAGATAATTGAGAAGTG
TTCTGAAAGCCACGAAGCAAGATTTCTAACGAAAGGTGAATTGGTCTTCT
GTATTCGATTCATCACAGCTTTGCTTTTCCTCCGAGTTAAATGCTCAAGA
CCTATGACGTACCAGTTTCTCACGGTTGAAATGGTTAACAAAGCAAGAAA
TAATGGTGGATTTGTCGATCAAAGAGAGTTCAAAACAGCATCAAGGTATG
ATTATGGTTCTAAAGAATTTGTATTAGATTAAGACAAAGTCTACTTTTTC
TGCTTGATATCCTAATTTTAAGAAACGATGATTTTTGATCTAATAAATGA
TACCATACATTTTATATCACTTACTGTATCTTTAAATCAAAGTTTAATTC
TCATTTAGATATATCTATCAtatgataattattattttgttatgaTATTT
AAACTGTTTTATTAATAGTATAATAATAACAATGCATGTTTATTGTTTTA
AGGTATATCTTCGACACTTTGATATTATCAGACGATACGATAGAGATTAT
TGATTTGTACTTAGAGTACATCCGACCTCGTCTCAATCCACAATGCGACT
TCCTTCTACTCTCAACAAATGGAACTCAATTTCAATCCTTGACTTCAGCT
ATGACGATCCTCGTTCATGAAGCCATTGGCAAGCACATCAACCCAACTCG
TTATAGGCAAATAGTCGAAACGGAAAGCAGCGAAAGGCTTAACTTGGAAG
AGCAACATTACATCACCGAAGATCAAAAGCACAGCTCTACTGTAGCTAAA
ATACACTACAAGAAGACTCAATCGAGGATCGTTGCAGTAGAGGGACGTAA
ATGTATGGAAAAGATGACAAAGGACGCAAGGTCTGACGGCAACAAAAACC
TTGTTGAAATGTTTAATAATATATCTTGTTCTTTCGATAACGACGTATTG
AGTCATAGTCGACGCATAATAGAAGGTATGAAACCTAACGCTCAAAATTC
GATTTCGAGTGCTTCTTGCTCATCAAGCCATATGGAAGTTGATACCGATC
CATACCAACCAGTGAGTGAATCACTAAACGAATCGACAGATATGGTCATC
ACAGAAACTTTTCCTACTAATAACACTCCAGCCGTGGCTGATGTACAGGA
AGTCGGCATCTTAAATATACCAAATGACAATATTGTTATCAAAAAGGAGG
CTGCTCGACAACAAACCAACAGAAAACAACATAAGAATGTGAAATTCACT
AGTGCAGAAGATCATTGCTTAAAGCAGGGCATCGAAAAATACGGTCGTAA
ATCATGGGCTATAATTTTGAAAGACCctaacttaaagtttcatgAAACTA
GAACTAGAGATTCTTTGAGGGTTAGAGCTGACAGTGCTTGCTTTAGAAAG
CTTTTTAATGATAATAAACAAGCAGCCTGTCGGCATTAA Coding sequence (CDS) from alignment at sc0000010_pilon:1808118..1810306+ >XLOC_038143 ID=XLOC_038143|Name=XLOC_038143|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3864bp|location=Sequence derived from alignment at sc0000010_pilon:1808118..1810306+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTCGCCCAAGGCGACTCCAGGTCAACTGGAAGAGCTTAGTGGGAGC
TGCACATGGTAAAAGAACGCTAAAACTCCGACCAAACCAGCAGGACCTTT
ACACGTGTCCTATAAAGCTATGTTTACATGGTGACTTCAAAAGTTGCAGA
GGGTTGAGAAAGCATATCAACACTAAACATCCTTGGTACTATTACTTTGA
CGAGCAGCCTGAAGTTAAACGTGAGGACATGACTGACTTTCCTGTTGCAC
CAAAGAGAGCATCTACTGCCGGTAAGCCGTCTTTTTCATTGGATGAAGGA
ATTGGAAGAGACTTTTTAACTTGGCTTGGAACATCTTGTGGAGGTGGAAA
AAACAATAAGGAGGCTAGACAGATTGGCAAACGagctatgaaatatttta
tgcatGCCATGGGTAACAATGAAAATGACATTGACCTAACTAACGAATTT
GTTGACTGTTGTTTGTCATCTGCTTCAATTTTCATATCGTTTCTAAAAGT
GATAGAAGAAGAATGGAAAGTTGGTCCCTCCGGTGCTGTAAACTACGTAA
AGTGTATTACAGATTTCATTGATTTTCGAAAAGCAAATGGAGTTTCTGAC
AATACTCTTCGTTGCTTCACAGTTGTGGAAGTTTATCTCAGGCGAGCAAA
TGAAAACCTTCGAAAGAAAAAGAACTTAGACTGTAATCGAAACCTCGACT
TGGAAACCCTTATCGCCAGAAACAGCTGGGCAACGTTGGAGGAAATGGAA
GTGGTCATACCTTTCCACATGAAACAGTTCAAAAAGATAATTGAGAAGTG
TTCTGAAAGCCACGAAGCAAGATTTCTAACGAAAGGTGAATTGGTCTTCT
GTATTCGATTCATCACAGCTTTGCTTTTCCTCCGAGTTAAATGCTCAAGA
CCTATGACGTACCAGTTTCTCACGGTTGAAATGGTTAACAAAGCAAGAAA
TAATGGTGGATTTGTCGATCAAAGAGAGTTCAAAACAGCATCAAGATGCG
TCGCCCAAGGCGACTCCAGGTCAACTGGAAGAGCTTAGTGGGAGCTGCAC
ATGGTAAAAGAACGCTAAAACTCCGACCAAACCAGCAGGACCTTTACACG
TGTCCTATAAAGCTATGTTTACATGGTGACTTCAAAAGTTGCAGAGGGTT
GAGAAAGCATATCAACACTAAACATCCTTGGTACTATTACTTTGACGAGC
AGCCTGAAGTTAAACGTGAGGACATGACTGACTTTCCTGTTGCACCAAAG
AGAGCATCTACTGCCGGTAAGCCGTCTTTTTCATTGGATGAAGGAATTGG
AAGAGACTTTTTAACTTGGCTTGGAACATCTTGTGGAGGTGGAAAAAACA
ATAAGGAGGCTAGACAGATTGGCAAACGagctatgaaatattttatgcat
GCCATGGGTAACAATGAAAATGACATTGACCTAACTAACGAATTTGTTGA
CTGTTGTTTGTCATCTGCTTCAATTTTCATATCGTTTCTAAAAGTGATAG
AAGAAGAATGGAAAGTTGGTCCCTCCGGTGCTGTAAACTACGTAAAGTGT
ATTACAGATTTCATTGATTTTCGAAAAGCAAATGGAGTTTCTGACAATAC
TCTTCGTTGCTTCACAGTTGTGGAAGTTTATCTCAGGCGAGCAAATGAAA
ACCTTCGAAAGAAAAAGAACTTAGACTGTAATCGAAACCTCGACTTGGAA
ACCCTTATCGCCAGAAACAGCTGGGCAACGTTGGAGGAAATGGAAGTGGT
CATACCTTTCCACATGAAACAGTTCAAAAAGATAATTGAGAAGTGTTCTG
AAAGCCACGAAGCAAGATTTCTAACGAAAGGTGAATTGGTCTTCTGTATT
CGATTCATCACAGCTTTGCTTTTCCTCCGAGTTAAATGCTCAAGACCTAT
GACGTACCAGTTTCTCACGGTTGAAATGGTTAACAAAGCAAGAAATAATG
GTGGATTTGTCGATCAAAGAGAGTTCAAAACAGCATCAAGGTATATCTTC
GACACTTTGATATTATCAGACGATACGATAGAGATTATTGATTTGTACTT
AGAGTACATCCGACCTCGTCTCAATCCACAATGCGACTTCCTTCTACTCT
CAACAAATGGAACTCAATTTCAATCCTTGACTTCAGCTATGACGATCCTC
GTTCATGAAGCCATTGGCAAGCACATCAACCCAACTCGTTATAGGCAAAT
AGTCGAAACGGAAAGCAGCGAAAGGCTTAACTTGGAAGAGCAACATTACA
TCACCGAAGATCAAAAGCACAGCTCTACTGTAGCTAAAATACACTACAAG
AAGACTCAATCGAGGATCGTTGCAGTAGAGGGACGTAAATGTATGGAAAA
GATGACAAAGGACGCAAGGTCTGACGGCAACAAAAACCTTGTTGAAATGT
TTAATAATATATCTTGTTCTTTCGATAACGACGTATTGAGTCATAGTCGA
CGCATAATAGAAGGTATGAAACCTAACGCTCAAAATTCGATTTCGAGTGC
TTCTTGCTCATCAAGCCATATGGAAGTTGATACCGATCCATACCAACCAG
TGAGTGAATCACTAAACGAATCGACAGATATGGTCATCACAGAAACTTTT
CCTACTAATAACACTCCAGCCGTGGCTGATGTACAGGAAGTCGGCATCTT
AAATATACCAAATGACAATATTGTTATCAAAAAGGAGGCTGCTCGACAAC
AAACCAACAGAAAACAACATAAGAATGTGAAATTCACTAGTGCAGAAGAT
CATTGCTTAAAGCAGGGCATCGAAAAATACGGTCGTAAATCATGGGCTAT
AATTTTGAAAGACCctaacttaaagtttcatgAAACTAGAACTAGAGATT
CTTTGAGGGTTAGAGCTGACAGTGCTTGCTTTAGAAAGCTTTTTAATGAT
AATAAACAAGCAGCCTGTCGGCATTAAGTATATCTTCGACACTTTGATAT
TATCAGACGATACGATAGAGATTATTGATTTGTACTTAGAGTACATCCGA
CCTCGTCTCAATCCACAATGCGACTTCCTTCTACTCTCAACAAATGGAAC
TCAATTTCAATCCTTGACTTCAGCTATGACGATCCTCGTTCATGAAGCCA
TTGGCAAGCACATCAACCCAACTCGTTATAGGCAAATAGTCGAAACGGAA
AGCAGCGAAAGGCTTAACTTGGAAGAGCAACATTACATCACCGAAGATCA
AAAGCACAGCTCTACTGTAGCTAAAATACACTACAAGAAGACTCAATCGA
GGATCGTTGCAGTAGAGGGACGTAAATGTATGGAAAAGATGACAAAGGAC
GCAAGGTCTGACGGCAACAAAAACCTTGTTGAAATGTTTAATAATATATC
TTGTTCTTTCGATAACGACGTATTGAGTCATAGTCGACGCATAATAGAAG
GTATGAAACCTAACGCTCAAAATTCGATTTCGAGTGCTTCTTGCTCATCA
AGCCATATGGAAGTTGATACCGATCCATACCAACCAGTGAGTGAATCACT
AAACGAATCGACAGATATGGTCATCACAGAAACTTTTCCTACTAATAACA
CTCCAGCCGTGGCTGATGTACAGGAAGTCGGCATCTTAAATATACCAAAT
GACAATATTGTTATCAAAAAGGAGGCTGCTCGACAACAAACCAACAGAAA
ACAACATAAGAATGTGAAATTCACTAGTGCAGAAGATCATTGCTTAAAGC
AGGGCATCGAAAAATACGGTCGTAAATCATGGGCTATAATTTTGAAAGAC
CctaacttaaagtttcatgAAACTAGAACTAGAGATTCTTTGAGGGTTAG
AGCTGACAGTGCTTGCTTTAGAAAGCTTTTTAATGATAATAAACAAGCAG
CCTGTCGGCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:1808118..1810306 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 997-1932:1254 |
| Aaloc | 1-993:1 |
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