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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000352_pilon:149716..153186- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038142 ID=XLOC_038142|Name=XLOC_038142|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3471bp|location=Sequence derived from alignment at sc0000352_pilon:149716..153186- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATCCTCAATTCCATCTCTAACATCTCTTGATAAAAATGCAGAAGA
TTATGTCAAAACTTTAGAGGAAATAATCACTAAACATAACGAAACCATTC
GATGTTTAAGATCGGATAAATCGTCTCTACGTAAAGTAAGTTCTGCTTTC
ATTTCACGGTAAAGTAGTTTTGGAGGTGGTTGAATCATAGTCCATATAAA
AAACTTTCCATTGTTTCTTACTTGAACTTGTGTTTGAGAAATTATTTTGC
TTTGCTCGCTATTTGATCATGTGATTAAATCTTAAACCAATCCCACGAGG
AATACTTGGTAACGTGATCAAAAACTGAGCAATCGATTTTTATCTTTTGA
AGGAAAAAGCTAAAAAAAAAAGATTAAAACAATAAATAAGCTTCCAGACC
AGAGTTGTTTATACGAACTATGGTTGGATATATTAGAAAAAAGAAAGTTA
AACTTGTTGTCAGCAGTTGTCTTTAGGTTAGGCACTTTTTAAAAGCTATC
ATAGGTTTCCCATAATCATAAAATCGAAAAGTATTTTTTGTCATACTGAT
TTTCTCAATGAACTATATACTATTCAAACAACCCCTTCTCACAGACCCGG
TAGAATTTTTTCAGCCAGTGGGGGTCAAAATAACTGACTGAAAATCGATG
GGGATTGGTATTCCCATATTTCTTATGGCCGGGGATTTAAATTCTTTTGT
TTTCAAGTCAGAAAATTCAATGGGGATGGAAAAATAACATAACATTTTGC
AGCGAGGATTGGTTTATTTAATAATTTTCAGTGGGGACAAAAATGGGAGG
ATAATTTTCCACTGGGGAAGATATTTTGGCTAATTTTTCCAGTGGGAAGG
GCTCCCAGTGCGTCTGCGAGCGAAGGGGGTGTATTCAAATATGAGCAGCC
ACTTCGAACATTACGTAATCAATATCATGAAACATGAAAAACACTTTTAT
TTCTTTTCTCTAGGACTTAACACATACAAAGTATTCCAGAAAAACATTTA
TCAAACGTTTCACAATCACTACATTAAAAAATGCTTTCCTCAAATCGAAA
GTCAAAGATCTTGACGATCAAGTGTTTGCTGATGGCGAGATGATGGATAT
GGCAAGCCAACAATTAGAAAATGTCTATGCTGAAATGTCTGATCAAAGAT
GTATGATCGACTCACTTAAAGATGAATTGGAGGACTCTGAAAATGATAAA
AATCGTTTACAAAACTCGATGAGCGAAAAGGTAAGGAAATTCAAACTCAA
ACCCAGTCCCTTAGTTCCCTTTTTCTGATTCCAAAGTTCAAGTCCTGCAA
GTGGCTTTTGGGTACGATACATGTTTTTTTTATAAGCAAGTGTTTGTCCC
TATATCAGGCTCGCATTATGTTTAGTTTGAGAACAATAGAGCCATTGTTT
AGGTACCAAAAACTGAGCCTTCATATGCTTATAAATTTTATGCTTATAAA
AGAAAAAACATGTATTGCAGAAAAAGTGCACTTTTTTTATATGAACAAAT
CAAGAACAATTCCAGCCTCAGATTTGACAAATTACTAAGAAAATAATGCG
AATTCTGGTTATATCAAAAGAGGGTGTAATATTTGACAAGTCACGTGACC
TATTTAGAGCAATTCGATTGGTCAAACACTACTTAAACGCAATAATATTA
CGTGGTTCGGCCTACAATTAGGGTCAAAATATATTGGGAATTTTGGTTAA
TTCCTTGTTTTCAGATATTTAAAGATCGGAAGAAAAAGTCGCTTTTGGGC
AAATTGATAAATTCATTCGAATATTTCAATTTGGGAGGGGTTTATAGACT
TCCAGGGTATATTCTGAGCCCTATCGGATCATTCTTGAACTTTTAGTTCC
TCAGATCCTCAGTCTCAACTCTAGCGTTAAAATTCAGAGTTAAAACACTA
CTCGTCCAACCTAATTTAGAGCGCTTCCAAATCGTTTGTGGTTGTAAGAT
TTGGTGGGAATTTCCCTTTTTTCTCAAATATTATGACTTTGATTGTAGTC
AATCCGCTCCTTATGAACCATTCATTTCTAAGCCCAAAGATGCTAGGTTT
AAATCTCTTGGAAGGGAATGAATCCACTTATTTTTTTTATACAGCAAATT
AGTTTATATTCTTGAAATTTAGCTGAAAGATGCAGAATTTCGAGATGGGA
AAGCCTCCTTATATACCTCACTGAGACAAAAGTACTTTTAACAGACTATA
ATAGAGGCCTCCCAGTCACCTTTCAAATCACGAAATCACGCAAAAAAAAA
TCCAAATCACGTTATCACGAGTTAAATTTCCTTTCTATCACAATCACGTT
AATCAAGTTGTTTCCTCCAATCACGAAATCATGCACTTTAAGATCTTAAA
TCACAAAATCACGAACTTGGAAAAACGCCAATCACGGCATCACGAAAACC
GCTAGGGGATCTCATAATATTTAGCAAATTGGGCTCTTCCAGAAAAAATC
CGTTCATGGGGGGTGGAGGATGAATTGTCCAGGGGTATTGAAAAAATACC
AAAAAATTGCAATGCCCAGGGGGTAAATTCCAATGTCCAGGGGTAATTTT
TTGTGTCCACGGGGTTGATTTGATGTTTGTCCAGGGGTATAACCCGTGTC
CAGGGGGTTAAAAATCAAAATGTCCAGGGGTAATTCATGAAAAAATAATA
TATCCTCCACCCCCCATGAACGGATTTTTTCTGGAAGAGCCCATTAATCT
ACTCTGTCTTTCTCTACACAGGATAAGATCATTGCAACGCGGAACTACAA
AATCGCAGATTTACAAGCGGAAGTTGATACTGGATCAACGCGCATCAACG
AATCGAACGTGCGCTATGAAAAAGCCACGACACGTATCGACGAATTGGTC
GCTGTGTGTGCTGATAAAGATAATCAGCTTTTGACTAATCAGCAAGAGAT
TGAGCTCTTACGTAATGAGAAAAGTAGGCTGGAAGCTAAGCTATTATGTG
ATGCGAGCGAGAAAAGAACGCTTGCGCAACGAGTTGCTATGAAGGCATCG
CGTGCTGGAAGTTCTCTGAAGAAATTAAGTAATCCAGGTCGTTGGTGTGG
AAGCGCAAGATCAACTCGGTTTCGAGAAATGGCGGGTGACGAGAGTATGC
CCTTTCTACCGGCAACCGAGTGTGGAGCTGAACAAAGCTCACCGACTGTT
GACTCTGTCAGAGACAATACCACCATCCTCGCCCCCCTTTCTGCTACCAG
TAGCAACACAAGTACCGAAACACCTTCCAAACAAAACTTGAAAGCCAATA
AGAAAGACAACAAGAAAGGCAAAAAAGAAAAACCTAAAAAATCATCAATG
TTTGGTAGAGTCTTCAGAAAATCAAAGACACTAGAAAAATCTTTGTCACA
GACATCCACTGAATTGATTGATGATAAATGCAAATCTACAATCATCAAAG
ATGTAGATCAGTGTAATCATCAAGAAACCACCCCGCCCATTGGAACAACG
CCCATTGGAACAACGCCCATG Coding sequence (CDS) from alignment at sc0000352_pilon:149716..153186- >XLOC_038142 ID=XLOC_038142|Name=XLOC_038142|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2304bp|location=Sequence derived from alignment at sc0000352_pilon:149716..153186- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATCCTCAATTCCATCTCTAACATCTCTTGATAAAAATGCAGAAGA
TTATGTCAAAACTTTAGAGGAAATAATCACTAAACATAACGAAACCATTC
GATGTTTAAGATCGGATAAATCGTCTCTACGTAAAATGACATCCTCAATT
CCATCTCTAACATCTCTTGATAAAAATGCAGAAGATTATGTCAAAACTTT
AGAGGAAATAATCACTAAACATAACGAAACCATTCGATGTTTAAGATCGG
ATAAATCGTCTCTACGTAAAGACTTAACACATACAAAGTATTCCAGAAAA
ACATTTATCAAACGTTTCACAATCACTACATTAAAAAATGCTTTCCTCAA
ATCGAAAGTCAAAGATCTTGACGATCAAGTGTTTGCTGATGGCGAGATGA
TGGATATGGCAAGCCAACAATTAGAAAATGTCTATGCTGAAATGTCTGAT
CAAAGATGTATGATCGACTCACTTAAAGATGAATTGGAGGACTCTGAAAA
TGATAAAAATCGTTTACAAAACTCGATGAGCGAAAAGGACTTAACACATA
CAAAGTATTCCAGAAAAACATTTATCAAACGTTTCACAATCACTACATTA
AAAAATGCTTTCCTCAAATCGAAAGTCAAAGATCTTGACGATCAAGTGTT
TGCTGATGGCGAGATGATGGATATGGCAAGCCAACAATTAGAAAATGTCT
ATGCTGAAATGTCTGATCAAAGATGTATGATCGACTCACTTAAAGATGAA
TTGGAGGACTCTGAAAATGATAAAAATCGTTTACAAAACTCGATGAGCGA
AAAGGATAAGATCATTGCAACGCGGAACTACAAAATCGCAGATTTACAAG
CGGAAGTTGATACTGGATCAACGCGCATCAACGAATCGAACGTGCGCTAT
GAAAAAGCCACGACACGTATCGACGAATTGGTCGCTGTGTGTGCTGATAA
AGATAATCAGCTTTTGACTAATCAGCAAGAGATTGAGCTCTTACGTAATG
AGAAAAGTAGGCTGGAAGCTAAGCTATTATGTGATGCGAGCGAGAAAAGA
ACGCTTGCGCAACGAGTTGCTATGAAGGCATCGCGTGCTGGAAGTTCTCT
GAAGAAATTAAGTAATCCAGGTCGTTGGTGTGGAAGCGCAAGATCAACTC
GGTTTCGAGAAATGGCGGGTGACGAGAGTATGCCCTTTCTACCGGCAACC
GAGTGTGGAGCTGAACAAAGCTCACCGACTGTTGACTCTGTCAGAGACAA
TACCACCATCCTCGCCCCCCTTTCTGCTACCAGTAGCAACACAAGTACCG
AAACACCTTCCAAACAAAACTTGAAAGCCAATAAGAAAGACAACAAGAAA
GGCAAAAAAGAAAAACCTAAAAAATCATCAATGTTTGGTAGAGTCTTCAG
AAAATCAAAGACACTAGAAAAATCTTTGTCACAGACATCCACTGAATTGA
TTGATGATAAATGCAAATCTACAATCATCAAAGATGTAGATCAGTGTAAT
CATCAAGAAACCACCCCGCCCATTGGAACAACGCCCATTGGAACAACGCC
CATGGATAAGATCATTGCAACGCGGAACTACAAAATCGCAGATTTACAAG
CGGAAGTTGATACTGGATCAACGCGCATCAACGAATCGAACGTGCGCTAT
GAAAAAGCCACGACACGTATCGACGAATTGGTCGCTGTGTGTGCTGATAA
AGATAATCAGCTTTTGACTAATCAGCAAGAGATTGAGCTCTTACGTAATG
AGAAAAGTAGGCTGGAAGCTAAGCTATTATGTGATGCGAGCGAGAAAAGA
ACGCTTGCGCAACGAGTTGCTATGAAGGCATCGCGTGCTGGAAGTTCTCT
GAAGAAATTAAGTAATCCAGGTCGTTGGTGTGGAAGCGCAAGATCAACTC
GGTTTCGAGAAATGGCGGGTGACGAGAGTATGCCCTTTCTACCGGCAACC
GAGTGTGGAGCTGAACAAAGCTCACCGACTGTTGACTCTGTCAGAGACAA
TACCACCATCCTCGCCCCCCTTTCTGCTACCAGTAGCAACACAAGTACCG
AAACACCTTCCAAACAAAACTTGAAAGCCAATAAGAAAGACAACAAGAAA
GGCAAAAAAGAAAAACCTAAAAAATCATCAATGTTTGGTAGAGTCTTCAG
AAAATCAAAGACACTAGAAAAATCTTTGTCACAGACATCCACTGAATTGA
TTGATGATAAATGCAAATCTACAATCATCAAAGATGTAGATCAGTGTAAT
CATCAAGAAACCACCCCGCCCATTGGAACAACGCCCATTGGAACAACGCC
CATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000352_pilon | genome | sc0000352_pilon:149716..153186 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1090-1143:55 |
| Aaloc | 403-1089:751 |
| Aaloc | 136-402:2509 |
| Aaloc | 1-135:3472 |
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