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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000352_pilon:156094..159595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038140 ID=XLOC_038140|Name=XLOC_038140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3502bp|location=Sequence derived from alignment at sc0000352_pilon:156094..159595- (Clytia hemisphaerica_ch_hm2_pilon)
CTAACACAACATGACGCTCTAAACACCACTCTTCAACTTCTTACCAACAC
TCACTCACAAAACAACTTTGAACATTCAGCAACACTTACAAGAACATTTT
ACACTGCTTATATTAACAACAACATCATCATGAGTAAACAAAACAATAAA
AACGTTCCAAAGAACCATACTACTCCAAAAGCTTTTAATGGGATATCAAA
GAGCGCCTTGTTGGCTCCGCAAAGTGTCGTCACTATGCATTGGTGTACGC
CTAGCTCTGCTACTTTACCAATGGCAAGTGGGTTACATTTAGCCTCGGTT
AATTCCTCAACATGTTCGTGCACTAAAGAACAGATTAAACGTAACCGTAT
ATCAAGCGTTCCTGCATTACTTTCTGGTACTGCCCCACCTGAGTCGCAGA
TGACCGAATGGAGACGTAAAGGAGCCAGACCACGCTCTAGTGGATCAGTC
TCTAAAGACAGTGATTATAAAAGCCATGATAGTGGCACATTTAGTATGGC
TAACATGGTATCCGCCAGCGGAAGTGGAACCAAATCAAATGCCGTCAACC
CTGCCGCTATTACGCTCACCAAAGACCCTTTTGCGGAGTTGCGTGAAATC
TTGAAACCGTCATCACCGGAACTAATAAATGACATCATTAATGAAATCAA
AGGTATAATATAAATTTTAATTTATTTTAATTTCGATTTAGAGTAATTGA
ATAAAACATATAGATGAAATCATAATGAAGCTTTCTAGCATTCAAACTGA
ATGTAATATGTTCTTAGATTTCGGATGGATTTTCCCTTTCAATATAGCAC
CTGTAGGCTGTTAATGTAGGGTTACGCTGTGCCAGAATGTATCTCACCTG
TGGCACAGTGTACAGCAATGATTTTGGAAATTTCCAATATCGGGTCTGTT
TACAGAAAAGTGTAGGGGAAGCAGTTATTTATTGCCGGATGCTGACTATA
TATTTACCGGAAGTTAAACTTTTTCCACCTTGTGATCTTAGGGTAGTTTT
AGTGACTCTGATTTGTCCTCGTGTTTAATAAGCCACTCCACCTTTCCAAA
GAGTAACAATCAAGGTTCAGAAGGACTTTAACAGTGAATGACTTATCTCA
GGTGCCTAATAAACGCCCCCCCTGCTCGTTAATCTTAATGTTTACTTATT
TCTGAAAATATTTTCTAGAATTTCTAACCCTGTTAATTAATGATTAATAA
TTAATTAATAACCTGTTAATTAGGGACCCCGTTTATTATTAATTTTTGAA
GACCTCCCTCCTCCGTTTGCTAAGCGCCCGAGAGTAACTAAATTGGAAGC
TACATTCCAGGCGGATGGATATTCAAAAAGCCCAAATTCTAAAGATTAAT
GGAAGTTGACATAAGTAAGGTATGACTTAAGGGCTCTGACCATTGTCAAA
AAATTTGTTAAGGGATCTGAAGATAAAACTTTTGTTTTGGGTTCCTTGAC
ATTTTTAACTAACAACAGCCTTTACAAATTGTTTACAGATTCATTCTGTC
TAGAGTAATTTAAAATTTGATAACAAAAATGACGTTATGAACGTTATGAA
GACGTTAATAAAATGTTCTATCACCCTCTTTGACAAAAAATGCTAAGTTT
CAATGGGTAATCAACCTTTTTCTTCCGAAATGTTTTTAAATTATCCGCAA
AGAATTGAACGCTATTTTAAAATTTTCGCAAAAATTTTCTAAATTGATGT
ATTAAAAATTATGACTGTTTTTCTACAAAAAAATTAGGACAAAAAATTGG
TCAAAAAACACTTTTCAAGATTTTGAGACAAAGAAGCTTTTACAAAAGTT
TTCCGAAAATTCATTTTTTAGTTTGCTGGTTTATAATGCAAAAATAATTT
TCAAAATGTTTTTTCTTCGCCGAAAAAAAGGCCTTCCAAGTTGAAATACG
TACTCTTCTTCGTAAAAATCTTCATTCTCTTTCTCATCAATTTTTTTCAT
TCCGATTTCTAAATTTTCAGATTCAGGAATAATTGGCGTAACAGAAAATG
TAAAACATGCCATAGTTTTATTGGTTACATCAGGCCATAGTCATTATAAA
AAAAACCCGGTCTGGTAATGCATTGTTTTAGCTTTTTGTTCAATTTTGTT
TTGTTACAAACAAAAGACAAGTTGCGATTTGCATACTTTTTGATCACGTT
ACCAAAATCTCCTCTTGGGATTGGTCTATTTTCTAATCACATGATCAAAA
AGTTTGCAAAATAAATCGATGTTGGCACGTAAGCTCCATCTTTTAACAAT
AAAAAGAGACAAAAAGCCTTCCAGACCAGTGTTTTTATAATGACTATGAT
CAGGCAAAAATCTATACTTTGTACATGGCAAGTATGAAAAATTCACTATC
GGAAATAAGAGAAGGATTTTTACAAATCTATGGTCGTTAGGAAGATAGTT
AGCAGTGGAATACATTATCAATATAGAAAATTAAAAAAAAGGAAACAACG
TTGTGAAATAATCGACTTCAAGAAGCATCGTTCAGTGAATATTTATTCGT
TCATAAGCATACGCGTTCTAAATTCAACTTTGACGTCAAAGCAAGTCTAC
CAAGCCTTGAATTCCGAGCATCATTTCTGCCATAAGATAAAACTTAAGAC
TTCTGCCTGGCCGACTGTTTAACCCTATTCATACTAGGCTATTAGAGGCG
GTTCAAAACTAGGGGGGTTGTTTCTGTACCACTTTTGATGACTTCACTCG
TCATGGTCTTTTAAAAAGCTACACTTTTTTTTATATAAGAACAATTTTAT
AAGAACAATGAGGCTCAAAAATGCCAAAAAATAAGAACAATTTAAGAACA
GTGGAGAGGCTGAAGTTAGAGAGTTATAGCAAAAAGAATCACTGGTTTCT
AAAATCCTCTAAATAGTAAAGTAAATAGCCAAAACTTGTTTTTTACCTTA
GAAAAAATAAGAGCAAAATAAGAACAATTCAAGGCTCAAAGTGCCAAAAA
AATAAGAACAGCCGAGCCTCAACAAAGATTTACTGGTTCTTATAAAAAAA
AAGTGTATGTATTTTAACAAACACTTTAGAAAAAAGTTCCCTGAGTCGTC
TAAAATGCTTATTTTATCCTAAATATTCAATAAATTACTGTTTAAACGAT
ATATTATTTGACATGAAAAATAAATTTGTATTGAAAATGTGTCAATTTTT
GTGACACCTTACTGTCAGAAATGTCATCACGCTCAAGGGTGTGGAAATTG
TTAGGTGACAAATTTTTTGTATTTTGAAGCTAAATAAAAGTTAAGAATTT
ACAGAAAATTTCATGCCAAAAGCTCTATTATTTCAGGAGCTATTAACAAT
AGTTTTATCCCCAAATAGAAACAGCCCCCTCCCCTAGGACGAATAGGGTT
AAAAATAACACAGATTTATTTGACACAAAGACGGGTTCTGTTCATTATTT
TTAGGAGTGACAGCCAATTCTGAGAAGACTTCCGAGTCCAATAATCCATC
TCTTGCATCTACATCTGTAACTGTATCGAAGAATGTATTGCCACCATCAA
CC Coding sequence (CDS) from alignment at sc0000352_pilon:156094..159595- >XLOC_038140 ID=XLOC_038140|Name=XLOC_038140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1500bp|location=Sequence derived from alignment at sc0000352_pilon:156094..159595- (Clytia hemisphaerica_ch_hm2_pilon)
CTAACACAACATGACGCTCTAAACACCACTCTTCAACTTCTTACCAACAC
TCACTCACAAAACAACTTTGAACATTCAGCAACACTTACAAGAACATTTT
ACACTGCTTATATTAACAACAACATCATCATGAGTAAACAAAACAATAAA
AACGTTCCAAAGAACCATACTACTCCAAAAGCTTTTAATGGGATATCAAA
GAGCGCCTTGTTGGCTCCGCAAAGTGTCGTCACTATGCATTGGTGTACGC
CTAGCTCTGCTACTTTACCAATGGCAAGTGGGTTACATTTAGCCTCGGTT
AATTCCTCAACATGTTCGTGCACTAAAGAACAGATTAAACGTAACCGTAT
ATCAAGCGTTCCTGCATTACTTTCTGGTACTGCCCCACCTGAGTCGCAGA
TGACCGAATGGAGACGTAAAGGAGCCAGACCACGCTCTAGTGGATCAGTC
TCTAAAGACAGTGATTATAAAAGCCATGATAGTGGCACATTTAGTATGGC
TAACATGGTATCCGCCAGCGGAAGTGGAACCAAATCAAATGCCGTCAACC
CTGCCGCTATTACGCTCACCAAAGACCCTTTTGCGGAGTTGCGTGAAATC
TTGAAACCGTCATCACCGGAACTAATAAATGACATCATTAATGAAATCAA
AGCTAACACAACATGACGCTCTAAACACCACTCTTCAACTTCTTACCAAC
ACTCACTCACAAAACAACTTTGAACATTCAGCAACACTTACAAGAACATT
TTACACTGCTTATATTAACAACAACATCATCATGAGTAAACAAAACAATA
AAAACGTTCCAAAGAACCATACTACTCCAAAAGCTTTTAATGGGATATCA
AAGAGCGCCTTGTTGGCTCCGCAAAGTGTCGTCACTATGCATTGGTGTAC
GCCTAGCTCTGCTACTTTACCAATGGCAAGTGGGTTACATTTAGCCTCGG
TTAATTCCTCAACATGTTCGTGCACTAAAGAACAGATTAAACGTAACCGT
ATATCAAGCGTTCCTGCATTACTTTCTGGTACTGCCCCACCTGAGTCGCA
GATGACCGAATGGAGACGTAAAGGAGCCAGACCACGCTCTAGTGGATCAG
TCTCTAAAGACAGTGATTATAAAAGCCATGATAGTGGCACATTTAGTATG
GCTAACATGGTATCCGCCAGCGGAAGTGGAACCAAATCAAATGCCGTCAA
CCCTGCCGCTATTACGCTCACCAAAGACCCTTTTGCGGAGTTGCGTGAAA
TCTTGAAACCGTCATCACCGGAACTAATAAATGACATCATTAATGAAATC
AAAGGAGTGACAGCCAATTCTGAGAAGACTTCCGAGTCCAATAATCCATC
TCTTGCATCTACATCTGTAACTGTATCGAAGAATGTATTGCCACCATCAA
CCGAGTGACAGCCAATTCTGAGAAGACTTCCGAGTCCAATAATCCATCTC
TTGCATCTACATCTGTAACTGTATCGAAGAATGTATTGCCACCATCAACC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000352_pilon | genome | sc0000352_pilon:156094..159595 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 655-750:97 |
| Aaloc | 1-651:3503 |
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