XLOC_038135 (mRNA) -

Overview
NameXLOC_038135
Unique NameXLOC_038135
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000053_pilon:1642036..1649854-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038135 ID=XLOC_038135|Name=XLOC_038135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7819bp|location=Sequence derived from alignment at sc0000053_pilon:1642036..1649854- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATAAAGAATGCGAAGAGACAGCTATCAGCTTCAGCAACCCAAT CTCGGTAAGTCTAGACTTTTTAGCTGTTTTTGTCCAAAAGGGAAAAGAAA TAAACTTGTAAACTTATTTATTGCACACAAAGAAAAAATATTGCGTGACC TTTCTCCCTTTGTCTGACTGGAGAAAGGTCCTACCCAGAAGGAAAGACTT CGGCCCCTTTGATTAAATCAATGTGCAAATAAAAAATGGAATTCTATATC TATAAATGTCAAAACAAAGGGGAAATAAAGAACTAATTCCCTAGTGAATA GAAATAGACACGAACAAACAAAAGAGAAATCTACAAATCTATTTCATTTT TCAAACATGATGAGCCAAGACTGTATGGTAAGAAAGCTGACAAAATTTAT TTGAATATTTTTAAATTTAAATTGATTTTGATTTTATGCGGCCATCAAGG GCAAATTGTTTAAATCTTGCTCTTTACGAAAGTTTGTATTATAAAATATA CAGTAGTGTCTCCATAATTCGAGCACGCATTGAGAACACGAATTTGTCAA GGGGGGGGGGGTGACCTTGACAGACAACGGGTACGTGCCGCTGTAGTGTG AAAAATGGACCCTTTCAGATATGGATATTTGGTAAATCTGGGATTAGTCC GGCGGCGATCCAGGATCACCCTTACAATTAGTAAATATGGGTTTTTATTT TATTTTCCCATCATATGGTCCCTTGGGACCCCAAAACCAGTTTTTGCCAA GCTGGCAAAGCCGGGGAAAATTTTTTATGGGGGCTTGAAGGGGGTAGGGT CATTTTAGCCTGGGGGTCCTTAGAAAGTCGATTTTTGAAGTTCTTATTTA GCTAAAACTGATTGTGCCATCAGATAGAGCTTGAAGAGTAGATCTCCAAA ATGGGGTCATTTGTCTCATTTGGCGGACTTAGTCCCCCGGAATTGGCCGA TACGTCTTCAAAAATGCAATATTTTGTGCTGACGTCAGCATTTTTGAGAA AATTTTCAGCGAAAGATACCAATTTTAACAGATGTGTCTCGAAGTGTACT ATCGATTAGAGGGGTCATTTATAGGGTTTCCTAGGCTAGATCATGAGATA TTTGAGTTTGAAATTTTGCTGACTCTGCGTTTTTCAACGTTTTTGGCCCT TTTCTGCTGTAGTTTCTTGTCATTTTTTTCCAAACTGAGGCTGGGCATGT TCTTACGATGTTCTTAATTTTTCGACGAATTTCAGCCTCAATGTTCTTAT AAACTGGGTTCTAATAAAAGAATGTTAAAAAAAAAAATATTCTTAACACC TTACCTTTATTAGATTCCCCAACCATTAAAGCCAAACCAGAACATTCAAA ATTTTTGAAACCTGCAGATGTTCTTAATTTTTTGAATTTCAAGCCTAAAA ATATTCTTAATTTCAGCATTATGTGAGTGTTTTTGTGCGGTTTCTTTTGA AATTGGATGTTTTAGAGTCCGTTCAAGCCTGAAAATGTTCGCAAGGGCTC TGACCATAATGAATTTTTAATATTGCCCTGTACAAAATGTAGATTTCTGC CTGATGTAACCAATAAAACTATGGCATGTTATACATACTGTTAGTCCAAC TATTCCTGAATCTGAAAATTTAAAAATCACATTAAAAAATTTTGATGAAG AAGAAAATGAAGAATTTTGCCAAGAAGGGTATTTCTTTCAACTTTGAGAA CCTTATTTTCGGCGAAGAAAAACCACTTTAAAATTTATATAAAGTTCTTT CTTATAAAAAAAACCTGTATCAAGCCTTTCTTGTAAAGTGAGACACCCCC CTTATGGAAGGGGGAGGGGTTCACATTATGAATTAATAGTACTTTCGGGT AATAATTTACAAAAATTCTTGTCTCTACCCACTGGTCATGGGCAGTGGAT GGTTAAATAAGAAGAATATTCGAAAATATTCAATTTGAGGCTGCCGAATC CAAATCTGATACACGAAGCCCGAAGTCTAAAAATTTTGAGGCAAAGGCTT GGAGTTTTTGTGGTGAAAAAATGAGGGGAATTTCCCAAGAATCTTCAAAA TATTTTAGCTTCAAACGCTTACTAATCGATAAAGAATTTTTTGATACGTA AAATTTAAATACCTTTTTGTAAGTTGACTTTTAGTTGATTTTAGCCGCTG CCTTTTAATCTCTTGTCATATTTTTCTTGTCAGCTTCTAAATCCGACTTC ATGAAAGCATGTGTTGTGTTTTGATAACTGCGGAGTACTGGGTCGAAATT TTTCTTCCCGATCGTTAAAAATGAAATCGATTATAGCCTAGCAGTGTTTT GATTGGTCAAGCATGAAATCGACATCAAAGCATTCGAAATTTTTTTACAC TTTTCAAAACATTTAGCTTGTACTGCTGTGCTGTTGATAGCTCTTTTGTG TTGGTTTTTTGTTTTGAAAGTTGTGTTTTGTTAGTTTGGGATTTCTGGAA AGTCTCTATGCATCGTTCGAATTGTAAACGTTCTCGCTTCTCTGATTCCT GGAGATGGGGTCACGTGACAAGATCACTTGATAATGCATTCAGATTGAGA CTTTATGGTTATGCTGGCATTAGAATTTCAAGGGTTGGAGTCTTAGATGA TGTAATTATAACTTTCTACTTTTCTACAAATTTAATCTCGCAGAAAATTT ACGTTGATTACAGTACGTTGATAAATATCAACTTCACAGAAAACAAATGT GTCAACAGGTTTTATCCAACCAGATCCAACGAGGGGACCTTAATCTGAAC AAATTACGACATTATATACCTTTCATTTAGATTTGAATTTTCAACCTGTC TTACTAGGGGGATTATGAAATTCATTGATCGTTCTTAAATTGTTCTTAGG TTTTGACTAAAATTTATCCTTATTTTTTCTCATTTCTAGCTATACGTTCC GATCACCGATGGGAGTGCAATTCAACAACAAAAACTTATCCCTCCAAATT CTTCCGTCTATGAACCTGCTTTCAATGCAGTAAGTTTTTTTTAAATGCCT TTCAAAATTCTTAAAAATTTAGTAATACTTATGGGGAAAAGAAAATGTTA AGTGGATGATTTTAAGACTTAAGAAAATCTCTCAAAAATCCCGAGAGAGG ATTTTTTCTAATGGACCAAAAATCCTAAATTTATACTTTTTCCTGGACTT TAAACTTCGTTGATTTGTCAAATCTTTCTTTGAGCAAAATATTCGGCAGA ATGAGTCTATTTTGCTCATTTTTGGCCATTTCCAGTGTACTTTATTTAGG CCAATCTTTAGTAACAGATTTTTACCCATTCCACAAGCCTATAAACGAAG AAAATCAGTTTTCATTTTCTTTAGAGAGGCCCTTCAAAAGACCTATGATT CACGCGATGGTGCAATTTTCTTTTCCAAATTCACACATTCACGAATATTT TTTCCTAAATTCATGCAATTTCTGTTCACGAAAAGTTTTCCAAATACCCC ATTCACACATTTGCGCATTCATTCAAACCATTGAGTTTAAAGCCCGAAGG GCTAGAGTTCAATCTCTAACCTTTCTCAGGCAACAAAAAGTGAAGCCTTA AAAAATGCGCCGACTTTTTGACAACAGATTGTATCTAGCAATTCCTTTGT TTACGATTGATATTTTTTTTCGAAATTTAGCGGCAAATTTTAGTTTCAAT CTGTCATTTGTGTAAAAACCAGGCGAGCCGCTCAAGGCCGTGCAACTTTG GTAGGATTTGTTGGCTTCAAATCCTACCAAAGAGATTGACTTCTAGCCCT TCGGGCTTATACTTCATTGATTCAAACTCCAGAGCGCCCCCATAGAGGCT TCTAGCCATCTTGATTGAGGATAAATCCTAAACGCCCATAATTATTCCGT TCAGGGTTACTTCACGTTACTTCATTTGTTTGAATTTCATGGTTTTTTTT ATTTTTGAACTTTTAAAGCTAACTCATAGATCATTGACAGTTACATCAAA ATGCCAAAAACATTTTGTTCAACCACCTTCACTTCAAGATAGGCCACCAT AGAATGAACTTCCTTTTATAGGATGAACCATATTCATGTGGCTTTCAGCC TTGCACTCCATCGCAGAGCCTAATCAATTTTAATGACTTTTTTGACTAAT GACCAAGTTAAATTTTTCTAATTTTTTTATATTTGAGTATTAAAAAGGCA TGCATTCAAATAATAAAGGTTTAAAATTTTTCTCTGGGCTAGTTAATAAA ATATCTCAAATAGGCTCTGTGATGGAGTGCAAGGCTGAAATCTTGAAGTG AAGGTGGTTGAACAAAATGTTTTTGGCATATTGATGTAACTGATTGATGT GTATGCCTGTTGCAACAACGTCAGGGTTTTAATCAAACAAAACGATTGGG AAACATTGAGAAATTTGATCGTCACAGATCGTCAAATTAATCGATTTAAT GAAAAAAGTTTTCAACGCTAAATTGAATTAAAAGAAGAGATAATCAGATG GTTTGTGATATTTGGCATGTGTAATCTTTTTATTTTCCTGAGCAAAATCT CAAAATATTTTACCTAAATATTTTCTAAAGTCTATTAATTACAAGTTTTT GACTTTTAGTAAAAAATTTCAACGTAAGAACCGTGTGAGAACCCTTTTTC AGAAATTTCAAATTTTGAAATCTCGACTGTGGAAAATAATTACCCAAACA TACTTGGAGGTTTTACTCAAGCTCACACATAAGCTTTCTTCAGGCCAAAT ATCTCAAACCATCTGATTATCCCTTTATAGCGCAGGCAATATGGGGCACT TGCAGGTGAACAAGGTCTTCAACTGTTCCTACACATCTATATTTTGAGAA TCACGATGGTTTTCAGGCTAACTCTCTATCACGAACAATTCAGGGGTGTC TTGAGAGCACCTGGGGTCGTTTTTTCTAGCAGCTTTGCCTAGGGTAGGGC ACTTGTTTCATCCAAACTAATTTTTGAAATCATGTTCAAATTTCAGTTCA ATTTAGGCGTGGAATTACCTCAGCATATACAACCAGCAAGCCATCACCAA AAGACTTTACAACAACATAACACACAACCCTATCATCAACAAGCGTGGCC TAACCAGACACTCCAGGCTCAACACCCTACATTCATAGAAGCTCCTTCCA CAGCTAACAAAGTTCTCCCCATTTTCGAAGGTCAAAGTTTCCCGTTTCGA TTATGGTATTTGGTCAATCATGAATTTTATGATGACGTAATCAAGTGGAG TGATGATGGGAATTACGTCATTATTACGTCAGAGGGGCGATTTGAAGATA AGGTTTTGATCGAACCTCGAGATCGTATCTTTAAAACGACCAGCATGAAG TCTTTCATTCGCCAGTTGAACTTGTATGGTTTTCACAAAGTCCAGTTGGA CAAGGATAAAAACTTTTCGCATTTGAACGTCAAAGATAAAGCGAGTTGGC CAGAAACCGTCTTTGCGCATTCATCTTTCAAAAGATCACGTCAAGAACTT TTAGGTGAGTAAAGCTCTATTTTCTCTAATTTAGGTGTCTAATGATAGCT CCCAAGTTTATTAATTTTTTTGATTTTGCCCTAACTTGAAAGCTCTTTTG GTATATGAGAACGTCACTCACTTATCGTCAGGATATCGTAGCGAAACGGA ACCGTAGAGTGTGAACATGGTCTTAGATTTTAGTACTGTCTCACCTCCTT AGTTAGTCTCCCAACAACTTTTATTACATTCCTGTAGAGCAAGTGAGACG ACGTTGTAAAGTCAAGCAACACAAACAAACAAAAGCTCAAGGTTTTCCCG TCGAATCTTACCCGTCAACGTCGTCCGTCAGTAACCCAAAGAAACGGCGA AATATGTTTTTAGAATATTCAAACATGGTAGCATCTTCATCTGCTTCAAA TCAACAACAATCTTCAACCCAACTCCAAGAATCACAGTCTGAAAATCTTC AACAAACGTAAGTCTCCTTTTGATCGTCTTAAGCGGGGGGAGGGGGAGAC CTTAACGTGCCGCCGTCAAATATTATGAATGTTTGGTAAATTTGTGACCC TGTCAGAACAAAAAATCGAAAAGAAGACGAAAACTTTCCACCCTGAAAAT AAATAGACAAAAAGAAAAAGAAAAGAATTAACCAAAAATCGACCGTGTCG GATATTCAATTAATAAATTTTCCAGATTAGCCAGACCCTAAACAATAGAC CCAGACCAGCAGTACGCCCCATACATAATTTTGCCTAAGTTAACAGTATC ATTAGTGTTATCTTGGAGATCTAGACGAGCTCTTGTCTTCAATCAACAAA TACTTGTTACTCACTTTAAAACTTTAAAGAATGAAGGAAATGCTTGGTAT TTCTGCTGAGAGAGTTGCTGAAGATGTTGTACAATTTTTGCGAAGTTGTA AAATTTATATGCTAAACGCCTACCACTCAAAATTATTATTTTTTTTTCAT ATAAAATTAATATTTTAATTTTAACCTTCATTTTTACCCCTCTCATTTGA GCTTACAATTTTCACTTTTTGTTTGCAGGTACAATCCATCAGCAAGTGAA ATTATGATGCAATACCCTAACCTTTTACCACAACCTGATCAATTCTTAAC TGCTGGACGCGATGGTAAGAATGTTGTGAAACGACTTTTTTTTAACATTC AAACTAGGTGCAAAACAGTTAACATGGCTTTGTCGTTATGGGACAACACT CAACCTTTCGAAATTTTTCAAAAACAATTAAATTTTCTTAATTAAAGAAA ATTTACAGCAGATGTCTTTAATGTTTGCTCCATTCATAAAGAAAATTCGT TTAAAAGTATTAAGGCCTATTAATTTTTACAAAAAATTGAATTTCATGTT GCAAAAAATTAGCATTTTTTGAGACAAATGGTCTTGAGAAGACAATATTT GCCCTGGGAAGACAAAAATTGGTCTCTATGTCAAAATGTTCCAGAAATTT TTAGTACATGTATACTAAAATAACAACTCTTTAAAACTCTTTTGGTATAC ACTAGACGGCTCCCGTCGTTGCAAACGCCGGTTTAGCTTGCGCATCGAAA GCCCTTAGGATGATAAAGATGGTATTATTATTATTGATGCTCTCTTTAAT TCAAATAATCTTTAAGGGTAATTTGAGTTAGTTAGCACATTGAGAAGTAT ACATTTATGACTGAGATTTCAGTACCGATCCCCCTCCCTGAGTTTTAAAA GCTTTAGACTTTCATCGAGAGAACACAAAACTTTCAAATCAGGTGAATCC TAAAAACAGGTGTCAGGGTAATCTTTTGATGCACCCTAATCTATAATCCT TTCTTAAGGGCAAATGCACCATTAAATCTGCAAAGTCAAAGAGAGGTTAA TTAGGGATCGTCAAACTTGGCTTTTTCATTGTAATATTCAAACACCTTTC TTTACCCTTGAATACTTCTGGGGTCAGAAATTTTCGAAGTGTTGTGAAAT TTTCGACATTTATTCTCGCGAATTTGACGAAAAACATTTTTGATTTTCGC CTTTCAGCCATGATGGCGACAACCTCCGCACAACGTCTCTCTCCCGCTTC TTCCGTCAAACGAAACCTGCAAGCAATCGACTGGGGAAATATCTCGAACA TAAATAACTCCTCGACAAGCACAACAAACGAAGATGTGTCACCGAGATTC GACTGTCAGATCAACCAGTTACAATCTCCATCAACGAACCGACAAGTGTC TCTTCGAGAGAAAACCACCCATCTCACAACACCGCCCTGTTTGCCGCCCG CTGCTGAGCAATCCCTACTTGATTCAAGCATGTCAAAAGAGAATTTGAAC CCTTTAGCTGATTTCTGTGCTTCTTTGTTTTACCCAAACAAAGAAAACGA GCTGGGCTGTGATGACTGA

Coding sequence (CDS) from alignment at sc0000053_pilon:1642036..1649854-

>XLOC_038135 ID=XLOC_038135|Name=XLOC_038135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2640bp|location=Sequence derived from alignment at sc0000053_pilon:1642036..1649854- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATAAAGAATGCGAAGAGACAGCTATCAGCTTCAGCAACCCAAT
CTCGATGGCTGATAAAGAATGCGAAGAGACAGCTATCAGCTTCAGCAACC
CAATCTCGCTATACGTTCCGATCACCGATGGGAGTGCAATTCAACAACAA
AAACTTATCCCTCCAAATTCTTCCGTCTATGAACCTGCTTTCAATGCACT
ATACGTTCCGATCACCGATGGGAGTGCAATTCAACAACAAAAACTTATCC
CTCCAAATTCTTCCGTCTATGAACCTGCTTTCAATGCATTCAATTTAGGC
GTGGAATTACCTCAGCATATACAACCAGCAAGCCATCACCAAAAGACTTT
ACAACAACATAACACACAACCCTATCATCAACAAGCGTGGCCTAACCAGA
CACTCCAGGCTCAACACCCTACATTCATAGAAGCTCCTTCCACAGCTAAC
AAAGTTCTCCCCATTTTCGAAGGTCAAAGTTTCCCGTTTCGATTATGGTA
TTTGGTCAATCATGAATTTTATGATGACGTAATCAAGTGGAGTGATGATG
GGAATTACGTCATTATTACGTCAGAGGGGCGATTTGAAGATAAGGTTTTG
ATCGAACCTCGAGATCGTATCTTTAAAACGACCAGCATGAAGTCTTTCAT
TCGCCAGTTGAACTTGTATGGTTTTCACAAAGTCCAGTTGGACAAGGATA
AAAACTTTTCGCATTTGAACGTCAAAGATAAAGCGAGTTGGCCAGAAACC
GTCTTTGCGCATTCATCTTTCAAAAGATCACGTCAAGAACTTTTAGTTCA
ATTTAGGCGTGGAATTACCTCAGCATATACAACCAGCAAGCCATCACCAA
AAGACTTTACAACAACATAACACACAACCCTATCATCAACAAGCGTGGCC
TAACCAGACACTCCAGGCTCAACACCCTACATTCATAGAAGCTCCTTCCA
CAGCTAACAAAGTTCTCCCCATTTTCGAAGGTCAAAGTTTCCCGTTTCGA
TTATGGTATTTGGTCAATCATGAATTTTATGATGACGTAATCAAGTGGAG
TGATGATGGGAATTACGTCATTATTACGTCAGAGGGGCGATTTGAAGATA
AGGTTTTGATCGAACCTCGAGATCGTATCTTTAAAACGACCAGCATGAAG
TCTTTCATTCGCCAGTTGAACTTGTATGGTTTTCACAAAGTCCAGTTGGA
CAAGGATAAAAACTTTTCGCATTTGAACGTCAAAGATAAAGCGAGTTGGC
CAGAAACCGTCTTTGCGCATTCATCTTTCAAAAGATCACGTCAAGAACTT
TTAGAGCAAGTGAGACGACGTTGTAAAGTCAAGCAACACAAACAAACAAA
AGCTCAAGGTTTTCCCGTCGAATCTTACCCGTCAACGTCGTCCGTCAGTA
ACCCAAAGAAACGGCGAAATATGTTTTTAGAATATTCAAACATGGTAGCA
TCTTCATCTGCTTCAAATCAACAACAATCTTCAACCCAACTCCAAGAATC
ACAGTCTGAAAATCTTCAACAAACAGCAAGTGAGACGACGTTGTAAAGTC
AAGCAACACAAACAAACAAAAGCTCAAGGTTTTCCCGTCGAATCTTACCC
GTCAACGTCGTCCGTCAGTAACCCAAAGAAACGGCGAAATATGTTTTTAG
AATATTCAAACATGGTAGCATCTTCATCTGCTTCAAATCAACAACAATCT
TCAACCCAACTCCAAGAATCACAGTCTGAAAATCTTCAACAAACGTACAA
TCCATCAGCAAGTGAAATTATGATGCAATACCCTAACCTTTTACCACAAC
CTGATCAATTCTTAACTGCTGGACGCGATGGTACAATCCATCAGCAAGTG
AAATTATGATGCAATACCCTAACCTTTTACCACAACCTGATCAATTCTTA
ACTGCTGGACGCGATGCCATGATGGCGACAACCTCCGCACAACGTCTCTC
TCCCGCTTCTTCCGTCAAACGAAACCTGCAAGCAATCGACTGGGGAAATA
TCTCGAACATAAATAACTCCTCGACAAGCACAACAAACGAAGATGTGTCA
CCGAGATTCGACTGTCAGATCAACCAGTTACAATCTCCATCAACGAACCG
ACAAGTGTCTCTTCGAGAGAAAACCACCCATCTCACAACACCGCCCTGTT
TGCCGCCCGCTGCTGAGCAATCCCTACTTGATTCAAGCATGTCAAAAGAG
AATTTGAACCCTTTAGCTGATTTCTGTGCTTCTTTGTTTTACCCAAACAA
AGAAAACGAGCTGGGCTGTGATGACTGACCATGATGGCGACAACCTCCGC
ACAACGTCTCTCTCCCGCTTCTTCCGTCAAACGAAACCTGCAAGCAATCG
ACTGGGGAAATATCTCGAACATAAATAACTCCTCGACAAGCACAACAAAC
GAAGATGTGTCACCGAGATTCGACTGTCAGATCAACCAGTTACAATCTCC
ATCAACGAACCGACAAGTGTCTCTTCGAGAGAAAACCACCCATCTCACAA
CACCGCCCTGTTTGCCGCCCGCTGCTGAGCAATCCCTACTTGATTCAAGC
ATGTCAAAAGAGAATTTGAACCCTTTAGCTGATTTCTGTGCTTCTTTGTT
TTACCCAAACAAAGAAAACGAGCTGGGCTGTGATGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038135XLOC_038135-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053_pilongenomesc0000053_pilon:1642036..1649854 -
Properties
Property NameValue
Aaloc961-1320:361
Aaloc874-957:1341
Aaloc655-870:2131
Aaloc145-651:2874
Aaloc55-144:4931
Aaloc1-54:7820