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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000053_pilon:1776942..1780513- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038132 ID=XLOC_038132|Name=XLOC_038132|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3572bp|location=Sequence derived from alignment at sc0000053_pilon:1776942..1780513- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAGTTTGGCGATTCTTTTGGCCGTTACCATCATTGGTCAATCTTA
CGCAGGTATTGTTTATTGTTGTTATTCAATCTTATTCAATTTTTATCTCA
ATTAAAGGGACATAAAAGTAGCAAAATGTAAACATTGCACGAACCACGTG
TCATTAAAGAGAACAATTAAAACCACGTGTCCAAAACAAACTTGTAAAAC
AATTGAATAATCAAAATTAGCCATATTTGCTTTGATTTTTTTATTTTGAC
ATTTGTTTTGATTTTGTATCCGCAGCATACAGTTTGTTTACAAATTTCGC
ACGTACTGTTATGTCCCTTTAAATATTGCGAAAAATCCTCTCGCTGTTCT
TGAGACCTTCTAGGTCCCATTGATATTTTTGGGGGGGTTTAGGGAGGTAA
TTCAAGGAAATTTTTCAAAATTATTAAAACATCTGTAATTTTCAATTGTC
AAGACATTTGTTATCACTAAGGAAAATTTAATGTGTTAAACATTGTAAAA
CCTGGGAGAGCGGGGTCAAATCAGTGAATAACATTTCTTCCAACAACCAA
GGGATCTTAAGATGTTATAGCTTCCATAGAAACAACTTTGTAAGATTTTT
AACTTAAAAAAATCGTGTATTCTAACGTAACTCCACAATAAGATAACTCG
AAAAATTAGCTATTTCATTACATTTTCTTTAATTTCAGGTTATCTTGGGT
GCTATAGGAAACCATGCGTCGCTGCAAACACTGACCGATGTGAAAATAAA
CCATATGGACGATACCAATGTATCTGCAAAGAGGGATTCTCTGGTCGCAG
ATGTGAAACAAGTAAGTCATCTTTCTTTATGGATGAGCTGTGAAGTGTTT
GAATTCTATGATACACATGAGATAAAAAGATTATTATAGTTTATGTATCA
GATGTCAAACAATTACGTCATTCCTTATTTACACAAAAATTGTTTTTAGC
TCTGGTTTCTAATTGTTATTGTGAATTATGAAGTGGGCAGAAAGTTTGCT
AACTTTGTGTGCACTCTAATAATAAGAATAAATAGGTCAGAATGTCACCA
TGCATGCCAGTGTGATGAATATAAGAAGGGATTTCTATGTTTTTTTCAAA
GAAATTTAAAACCTTACGGCGAGTCTTTCAAAGGGGTCATCAGACAGTTT
GATATTTTTTCTGGCCTGTAAAATCATTCCCACAATCCTGAACGAAAGCT
CTGAATCCCGGGGGAGGATACTTAGACAAATGGAGGGTAGGGTATTTGGC
ACCCTTCACAATACCATAATTGGATTTCCAAAGTCCCGGTAAGGGTAGGA
AAAAACAGAAAATCAAATTGCAGTCCCACTAAGGGTAGAAGAAATAGGAA
AAATTCAACTTTTTACCCCCAGAAAGATAGAAATTTAGTCAAAATTAGTC
CCGGTAAGCCTCGTAAAATTCACAAAATTTTCGTTTGTCGAGGGTTGGGC
ATCATCCCCCCGTCAGTTCGCAACCCTAGTACCCCCCCCCCCCCCCCCCC
GTGGCGCTAAATTTGTACTCTTATCCAATAAAATACTAATATTATCTTTT
AGTAAAATAGTCACAACCTTTTATCTTTCTTTCTTCTATCATAACATTAT
GAGCTGCAGTCAATGTGTTAGACATGATGTTTTGCCTTATTGCCAATGTT
TTTAAATGATTTAATACTTTGGGTTTTTTTTTCTGAAATAGATGACGATG
ATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATT
AATTCTTTCACTTGCAAATGCAAGAACGGATTCAATGGAAAATTCTGTAA
AAACAACATCGATGATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCT
GCGAAGACGGAATCGATTCTTTCACTTGCAAATGTAAGAATGGATTCAAT
GGAAAATTCTGTAAAAACAACATCGATGATTGCAAAGGTGTCAAATGCTT
AAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGTCAATGCA
AACGTGGATTCAATGGAAAATTCTGTAAAAACAACATCGATGATTGCCAA
GGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTT
CACTTGTCAATGCAAACGTGGATTCAATGGAAAATTCTGTAAAAACAACA
TCGATGATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGAC
GGAATCGCTTCTTTCACTTGTCAATGCAAACGTGGATTCAATGGGAAATT
CTGTAAAAACAACATCGATGATTGCCGAGGTGTCAAATGCTTAAACGGAG
GAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGAATGGA
TTCAATGGAAAATTCTGTAAAAACAACATCGATGATTGCCGAGGTGTCAA
ATGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCA
AATGCAAGAATGGATTTAATGGAAAATTCTGTAAAAACAACATCGATGAT
TGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATCGC
TTCTTTCACTTGCAAATGCAAGAATGGATTCAATGGAAAATTCTGTAAAA
ACAACATCGATGATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGC
GAAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGAATGGATTCAATGG
AAAATTCTGTAAAAACAACATCGATGATTGCAAGCGCGTCAGATGTCTTA
ATGGAGGAACCTGCAAAGATGGGATTGCTTCTTTCACTTGTCAATGCAAG
CCTGGATTCTCCGGAAAATTCTGTCAAGGTTTGTTTTTTTTCATTTTTTT
ACCAATATTTTTTGACTGCAAGTCATCTTTAAATAATGAGTTACAAGTTT
TGCTATCAACCATTGAATTTGCTTTTAATATTTTATGTACCAAGAGACCC
GGATATTGTTTTATTTCCTATGCCACTATACAAATTCTTGTTGAAAGTTG
TATTTCCCGAAATCAGTTCTCTTAAGTGATTTATTGCAATTTGCTTTTCT
TCGACAGTTCCATCATGTCACCCTAACCCATGTCAGAATGGTGGAAAATG
TTTGAAACATGGAAACGCCATCAAATGTTGGTGTAAACAAGGCTATGAAG
GAAGATTCTGTGAAACAAGTGTCAAAGGTAACATTTAAAATATTAAAAGA
TCATTTTCCTTTCGATGATTAAAGTTGCAATTAAAATACAACAATTTTAT
TTTTGAAAATTTATCTTAAAAAATCTTATTTGAGAAAATGTCGAAATTTT
TTGGAATTTTTTTTCTTTGCTCTTACAAAATCATTCGATATCAACTATTT
AGAGGCTGTATTAAAAATTACTTTACGAAGTACTGATATACATAATAAAG
TTAACAAATCTTTCATTTGCCAGAATGCAATTACCACTGCAGCAGACAGC
GTGGATGGTGCCGTATTATGGGAACCGACGGCCGTATTTATGACAACTAT
TGTCAATTCGAGCGTGCTCAATGCAAAAATAAATCACTTCAAATCAAGAA
GAAACTCTGTGGTTACTGGTAA Coding sequence (CDS) from alignment at sc0000053_pilon:1776942..1780513- >XLOC_038132 ID=XLOC_038132|Name=XLOC_038132|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1800bp|location=Sequence derived from alignment at sc0000053_pilon:1776942..1780513- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAAGTTTGGCGATTCTTTTGGCCGTTACCATCATTGGTCAATCTTA
CGCAGATGAGAAGTTTGGCGATTCTTTTGGCCGTTACCATCATTGGTCAA
TCTTACGCAGGTTATCTTGGGTGCTATAGGAAACCATGCGTCGCTGCAAA
CACTGACCGATGTGAAAATAAACCATATGGACGATACCAATGTATCTGCA
AAGAGGGATTCTCTGGTCGCAGATGTGAAACAAGTTATCTTGGGTGCTAT
AGGAAACCATGCGTCGCTGCAAACACTGACCGATGTGAAAATAAACCATA
TGGACGATACCAATGTATCTGCAAAGAGGGATTCTCTGGTCGCAGATGTG
AAACAAATGACGATGATTGCCGAGATGACGATGATTGCCGAGGTGTCAAA
TGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAA
ATGCAAGAATGGATTTAATGGAAAATTCTGTAAAAACAACATCGATGATT
GCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCT
TCTTTCACTTGCAAATGCAAGAATGGATTCAATGGAAAATTCTGTAAAAA
CAACATCGATGATTGCCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCG
AAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGAATGGATTCAATGGA
AAATTCTGTAAAAACAACATCGATGATTGCAAGCGCGTCAGATGTCTTAA
TGGAGGAACCTGCAAAGATGGGATTGCTTCTTTCACTTGTCAATGCAAGC
CTGGATTCTCCGGAAAATTCTGTCAAGGTGTCAAATGCTTAAACGGAGGA
ACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAATGCAAGAATGGATT
TAATGGAAAATTCTGTAAAAACAACATCGATGATTGCCGAGGTGTCAAAT
GCTTAAACGGAGGAACCTGCGAAGACGGAATCGCTTCTTTCACTTGCAAA
TGCAAGAATGGATTCAATGGAAAATTCTGTAAAAACAACATCGATGATTG
CCGAGGTGTCAAATGCTTAAACGGAGGAACCTGCGAAGACGGAATCGCTT
CTTTCACTTGCAAATGCAAGAATGGATTCAATGGAAAATTCTGTAAAAAC
AACATCGATGATTGCAAGCGCGTCAGATGTCTTAATGGAGGAACCTGCAA
AGATGGGATTGCTTCTTTCACTTGTCAATGCAAGCCTGGATTCTCCGGAA
AATTCTGTCAAGTTCCATCATGTCACCCTAACCCATGTCAGAATGGTGGA
AAATGTTTGAAACATGGAAACGCCATCAAATGTTGGTGTAAACAAGGCTA
TGAAGGAAGATTCTGTGAAACAAGTGTCAAAGTTCCATCATGTCACCCTA
ACCCATGTCAGAATGGTGGAAAATGTTTGAAACATGGAAACGCCATCAAA
TGTTGGTGTAAACAAGGCTATGAAGGAAGATTCTGTGAAACAAGTGTCAA
AGAATGCAATTACCACTGCAGCAGACAGCGTGGATGGTGCCGTATTATGG
GAACCGACGGCCGTATTTATGACAACTATTGTCAATTCGAGCGTGCTCAA
TGCAAAAATAAATCACTTCAAATCAAGAAGAAACTCTGTGGTTACTGGTA
AAATGCAATTACCACTGCAGCAGACAGCGTGGATGGTGCCGTATTATGGG
AACCGACGGCCGTATTTATGACAACTATTGTCAATTCGAGCGTGCTCAAT
GCAAAAATAAATCACTTCAAATCAAGAAGAAACTCTGTGGTTACTGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053_pilon | genome | sc0000053_pilon:1776942..1780513 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 754-900:148 |
| Aaloc | 634-750:514 |
| Aaloc | 199-630:1178 |
| Aaloc | 181-195:1880 |
| Aaloc | 58-177:2883 |
| Aaloc | 1-54:3573 |
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