XLOC_038112 (mRNA) -

Overview
NameXLOC_038112
Unique NameXLOC_038112
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000121_pilon:926261..927202+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038112 ID=XLOC_038112|Name=XLOC_038112|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=942bp|location=Sequence derived from alignment at sc0000121_pilon:926261..927202+ (Clytia hemisphaerica_ch_hm2_pilon)
agcggaaaaataaaactaaaaagcaaaaacaaaatatgtaAGACAAGTGA ACAAAGAGATGACTTGGATGTTGTTGCACCTGGTGATTGGTTGAAGTCGG TGGTGAATAGGGGTCTGGTGACAACAATGAACTCGTTACCAGGTTTCCGT GGCAACAGTTTTCCAGTACGAAAAGTCATTGGTGCCCATATTGACGAGGT TTAGTATGCTTTATTCGTTAATACtttttttGTTATTAGAACacaatttt acaagaataaCATGCtgaaatttggctaaaaacCTTATATTGAATTTAGA ACAATTTTAAGCCACAAATGTCAGAAATTGCTAAGAAACTTGTCACTATA TTGTAAGCCCGTTACCCGTCCTTCAATAAGAAAACCACAAGTTTAACCTT ATAAGGGAACTAATCTTCGTGGTGCGATGGTACTAAATTGGCGCATTTtt cggaactaattttcgtggtagACACTCAAAAAAGACAATATAGGTAGGAA TATTTAACATCTCTATCCAAGCAGTAAACTAAATATTCAATTTGTTTAAT TTCAGCATTCAAAGACATTTTACCAAGTCGAATGGGAGCCTAGTTGGGAA CCGGCTGAAAATTTGAAAGGCTGTGAAACTCTTATTCAAGACTTTTGGGT ACGAAACAACCCCATTGCTCGAGTGAAACAGGTAAAAATTACACGGTcca cattttggaatttttcataaacttataccaaattgaatcatttttcgATC TCGCGTAACttgtttatcgatttttttctcGGAAGAAATGACTTGATTTG TCAAAAATAATATTGTTGCCGAGATCGACCAATAGCTTCACTTCTTTCTC GTATGATTTGTATCGATAATGCATGATCTTCCATAGAAAACTAATGAact attttctcaatttttaagGAACCAGTGGACCAAATCTCGACA

Coding sequence (CDS) from alignment at sc0000121_pilon:926261..927202+

>XLOC_038112 ID=XLOC_038112|Name=XLOC_038112|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=696bp|location=Sequence derived from alignment at sc0000121_pilon:926261..927202+ (Clytia hemisphaerica_ch_hm2_pilon)
agcggaaaaataaaactaaaaagcaaaaacaaaatatgtaAGACAAGTGA
ACAAAGAGATGACTTGGATGTTGTTGCACCTGGTGATTGGTTGAAGTCGG
TGGTGAATAGGGGTCTGGTGACAACAATGAACTCGTTACCAGGTTTCCGT
GGCAACAGTTTTCCAGTACGAAAAGTCATTGGTGCCCATATTGACGAGag
cggaaaaataaaactaaaaagcaaaaacaaaatatgtaAGACAAGTGAAC
AAAGAGATGACTTGGATGTTGTTGCACCTGGTGATTGGTTGAAGTCGGTG
GTGAATAGGGGTCTGGTGACAACAATGAACTCGTTACCAGGTTTCCGTGG
CAACAGTTTTCCAGTACGAAAAGTCATTGGTGCCCATATTGACGAGCATT
CAAAGACATTTTACCAAGTCGAATGGGAGCCTAGTTGGGAACCGGCTGAA
AATTTGAAAGGCTGTGAAACTCTTATTCAAGACTTTTGGGTACGAAACAA
CCCCATTGCTCGAGTGAAACAGCATTCAAAGACATTTTACCAAGTCGAAT
GGGAGCCTAGTTGGGAACCGGCTGAAAATTTGAAAGGCTGTGAAACTCTT
ATTCAAGACTTTTGGGTACGAAACAACCCCATTGCTCGAGTGAAACAGGA
ACCAGTGGACCAAATCTCGACAGAACCAGTGGACCAAATCTCGACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038112XLOC_038112-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121_pilongenomesc0000121_pilon:926261..927202 +
Properties
Property NameValue
Aaloc325-348:919
Aaloc199-324:556
Aaloc1-198:1