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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000121_pilon:857934..860409- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038106 ID=XLOC_038106|Name=XLOC_038106|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2476bp|location=Sequence derived from alignment at sc0000121_pilon:857934..860409- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTACTTCCTATCTCTCTTCATCTCTTTTGTTCACTGTCGGTGATAC
AAGATGCTGCTTATGGAATACTTTTGATCCGCAAGGGAAACCTATTTGTT
CCTTACAACAACATACGTGGAGCTATGAGGTAGGTTTATATATTGTTCAT
TTGTTTTAGATTAAAAGATTGGGCTTTTCCAGAAAAATTTGAAAATGGGG
GTGGAGGATATAAGGTGTTTTGTGAAAATACCTTATGATCCACCGGACAA
AAGATCTTATCCCCCCCGGACAATCAAAATTACCCCTAAACAGAGCAAAT
TTGTCCCCAAAACAAGGCAAATTTTGCAGATTTTTCACTACCCCCGGACA
AAATATCCAATATATCCTCCAACCCCATGTACATAAATTTTCTGCAAGAG
CCCATTGCACATGATTTAGAGAGCGCGTGCTATTTTCTTCACATAGGGTT
TTTTCAAGAAAAATATAACATGGGATTAGATTATCGTTTACCCAATAATT
CTTCCCCAGGCAAAAAAGCTTACAAACCTCAACATGTATTTAATCATTTG
GCTTTTCCAGAAAAAAAATCGAGCACCCCCTGTTGAGGAGGTCCATTTCC
GTTCCAAGGGGGTAAGGTTTGAAATGCAGTGGAATTCCATAAGGGTAGAC
GAAAATCCGTCAAAAATAAGCGGAATTTCAAGAGGGAATGATTGAAAATT
TGTAAAAATTCGGAATTCCAGAGGGGTATGATCCTAAAATTGCCTGGAAT
TCCAAGGGGGTAGGTCACAAAAGGTTGGACCTCCTCAACAGGGGGTGCTC
GGTTTTTTTCTGGAAAAGCCCATTAATCATTCGCCTAAATTTATGCTTTT
CATCATGAAGAGTTCTGTAGAATCAATATGAAGTTCCTTTTTACTATACT
TACCTGTATCAAACACTTTTCTCTGCTGAAAAAAAACGATGCGTTCGGTC
AGACACTACTCCGTGTCTAAGCTTTTTTTCACAAGTCTCTTGCTGCCTCT
GTGGTGTAGCGCATAGGCAACGAGACACAGAATTTCTCTAACCGATACCA
TCGAGATGTTGAAGCAGGCCGACACAAGACAATATCAAGTATGTAAGAAT
CGTCCATGGCTAGTTTGGTACAGGCTATGATTATACATACTTTTGAGATT
TTTCAGCCTTTTATTCCTTATCATTCTTCTTCCATTTTAGGTGGAATGTT
TGGCACTTTCACCTGATAGAACGCTCTTAGCAACTGGTAGTGTGGATAAA
CAAATCACTCTTTCTACAGTAGAAGTCTCTGATGAGTTTAGTCATGGTTT
ACACGATGACTCTAATGAACTCCCATACGCTAAATTACCTGCTAAAACTG
CTACGTCCATGCAAGAAGTCAAAAGTAAGACATTTAAAATTTGAAACTTG
AAGGTATTTATCGTATTAATATCCTCATTTCAATTTGATCATTAGGCTTT
TTGATTAAACCGGTCGTCTTTAAAATTCAAATCCTAGAAAGCTCTCTTCG
AGATCTTCAGGTTGTCAGATTTTTAGATACGGTTTGCTGTGAAATCTGCG
AAATCGACAAGTATTTTAGAATTTTGGCATATACTCAAGGTATGAAATTT
GTTTCTAGAATGAAAATGTACTAAATAAAACCTTATCAAACCCATCATTT
CAGATGACAAATCATCGGCCGATTATCTGGACGATGCCGTATATTTAAAC
GTCGCGCGTGAAAAGGAGGATGGGCTTCGCGTCGCTAAACAGACAATTCG
AATTAAGGCTCCTGTTACATCAGAGATTTTACAGAACAAGTTAAGCAATT
TGAAAGTAGTTGATAACAACGGTACTGAACACCAAAGAACGGTGAGTTTC
GCTTTCGTTTTCAAACTGTTGATTTTCCTTATTCGAAGAAACAGTGCTAA
CATTCAGGATCACCGAGAGTTTAAAGGAATCTTTAACCTTTCTCAAGCAA
GAAAAAGTGAAACCTTAAGATTTGCGCTACATAAGGACAATCCTTATATA
TAGGGACGTCCTTAAATATAGAGTATAATGCCGTAATGCCTAAGAAACTT
TAGTTCCAATCTGAATTTTGTCAATTAAAATTATCTACATAAATTTTTAT
CTAGAATGCAGCCAATCTTTTTCGACGTTTATCAATGCGAGCTGAGGGTG
ACTCGAAAGAAAATCCGAAATCTAAAGAACTTGTTGAAGAAAGAAAGAAA
AATGGACCGCGTGTAAAACCATCAACGGCTAGTGTGAAGCGTCGCAAGCC
GGCCAATAGTAAAACGCTAGACAATGGCTTTTTATTGGAATTAGAAGGCA
AGTTTACAGTCAGTCCACCATCAAGCAGCCATCTTGGATATGATGATAAT
TTGAGTTGCCACAGCAACTCTGACGTCAGTAGTTTCTATAGCAACGATGA
CGAATATTGTGATATTGAGGTTGTGACGTCAGAAATGATTCGGTTGGCTA
CTGAAGAAGAAGCACACAAAATGTAA Coding sequence (CDS) from alignment at sc0000121_pilon:857934..860409- >XLOC_038106 ID=XLOC_038106|Name=XLOC_038106|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000121_pilon:857934..860409- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTACTTCCTATCTCTCTTCATCTCTTTTGTTCACTGTCGGTGATAC
AAGATGCTGCTTATGGAATACTTTTGATCCGCAAGGGAAACCTATTTGTT
CCTTACAACAACATACGTGGAGCTATGAGATGGGTACTTCCTATCTCTCT
TCATCTCTTTTGTTCACTGTCGGTGATACAAGATGCTGCTTATGGAATAC
TTTTGATCCGCAAGGGAAACCTATTTGTTCCTTACAACAACATACGTGGA
GCTATGAGGTGGAATGTTTGGCACTTTCACCTGATAGAACGCTCTTAGCA
ACTGGTAGTGTGGATAAACAAATCACTCTTTCTACAGTAGAAGTCTCTGA
TGAGTTTAGTCATGGTTTACACGATGACTCTAATGAACTCCCATACGCTA
AATTACCTGCTAAAACTGCTACGTCCATGCAAGAAGTCAAAAGTGGAATG
TTTGGCACTTTCACCTGATAGAACGCTCTTAGCAACTGGTAGTGTGGATA
AACAAATCACTCTTTCTACAGTAGAAGTCTCTGATGAGTTTAGTCATGGT
TTACACGATGACTCTAATGAACTCCCATACGCTAAATTACCTGCTAAAAC
TGCTACGTCCATGCAAGAAGTCAAAAATGACAAATCATCGGCCGATTATC
TGGACGATGCCGTATATTTAAACGTCGCGCGTGAAAAGGAGGATGGGCTT
CGCGTCGCTAAACAGACAATTCGAATTAAGGCTCCTGTTACATCAGAGAT
TTTACAGAACAAGTTAAGCAATTTGAAAGTAGTTGATAACAACGGTACTG
AACACCAAAGAACGATGACAAATCATCGGCCGATTATCTGGACGATGCCG
TATATTTAAACGTCGCGCGTGAAAAGGAGGATGGGCTTCGCGTCGCTAAA
CAGACAATTCGAATTAAGGCTCCTGTTACATCAGAGATTTTACAGAACAA
GTTAAGCAATTTGAAAGTAGTTGATAACAACGGTACTGAACACCAAAGAA
CGAATGCAGCCAATCTTTTTCGACGTTTATCAATGCGAGCTGAGGGTGAC
TCGAAAGAAAATCCGAAATCTAAAGAACTTGTTGAAGAAAGAAAGAAAAA
TGGACCGCGTGTAAAACCATCAACGGCTAGTGTGAAGCGTCGCAAGCCGG
CCAATAGTAAAACGCTAGACAATGGCTTTTTATTGGAATTAGAAGGCAAG
TTTACAGTCAGTCCACCATCAAGCAGCCATCTTGGATATGATGATAATTT
GAGTTGCCACAGCAACTCTGACGTCAGTAGTTTCTATAGCAACGATGACG
AATATTGTGATATTGAGGTTGTGACGTCAGAAATGATTCGGTTGGCTACT
GAAGAAGAAGCACACAAAATGTAAAATGCAGCCAATCTTTTTCGACGTTT
ATCAATGCGAGCTGAGGGTGACTCGAAAGAAAATCCGAAATCTAAAGAAC
TTGTTGAAGAAAGAAAGAAAAATGGACCGCGTGTAAAACCATCAACGGCT
AGTGTGAAGCGTCGCAAGCCGGCCAATAGTAAAACGCTAGACAATGGCTT
TTTATTGGAATTAGAAGGCAAGTTTACAGTCAGTCCACCATCAAGCAGCC
ATCTTGGATATGATGATAATTTGAGTTGCCACAGCAACTCTGACGTCAGT
AGTTTCTATAGCAACGATGACGAATATTGTGATATTGAGGTTGTGACGTC
AGAAATGATTCGGTTGGCTACTGAAGAAGAAGCACACAAAATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121_pilon | genome | sc0000121_pilon:857934..860409 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 502-873:373 |
| Aaloc | 316-501:822 |
| Aaloc | 130-312:1287 |
| Aaloc | 1-129:2477 |
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