XLOC_038084 (mRNA) -

Overview


Name	XLOC_038084
Unique Name	XLOC_038084
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000109_pilon:929681..932200-
coding sequence from alignment at sc0000109_pilon:929681..932200-

mRNA from alignment at sc0000109_pilon:929681..932200-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_038084 ID=XLOC_038084|Name=XLOC_038084|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2520bp|location=Sequence derived from alignment at sc0000109_pilon:929681..932200- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGAAATACAAGTTCGCCTTCAAACCGATGAAAACAGGACGAGGTC
AAAAGACAGAAATTTGAACTTTTTACATGATGTTATCAAAGAGATGGCTT
CATTCAGTCCGCAATTGGCCTCACGTGCTTTTGATAGTAGCAGCAATAAA
AGTTCCCAAGATGTCTGTGGATATTGTGGTGAATTGAGTTACGATGTTGA
ATTAAAAACTTTGCCATGTTTACATTCGTTTTGTGTGTCTTGCTTACAAC
GTCGTGTCGTGCGAACTTTAACCGGCGATCTTAACTTATCGTGTCCTTCG
TGTCACCGTGACGTCCGACTTGAAGGTGAAGATGGAGTCAACTCGCTCCC
TTCAAGTTCATGGATTCGTGATTATTTTGCAGATGTCGTGACTGGTGATC
GAGAGAGCACGCCTCCCAAACCATCGCCTTGTGAACGTTGCAGTGATTTC
CCTTCACCTCCTACTAGACGTTCCATCGATTCGCTACCACCAGGTTTGAC
AAATTTTTCGACCCCGCCATCAACTTCTAGTTCAGTAGCAACCTCACTTG
CGACGGGCCTCAGTAAACTGGCTATCGGTGCTGTACACCAACATCGAGTT
GAGCAAAAAACTTTTCCAAAACAAGTTCAACCACAACATCATTCGTTCGT
ACCTTCCTTACATTCTACAACCCTCTCTGCTGGACGATCACCTGTATTTT
GTGAACTCCACAGTCGCGAATATCAATATTATTGCAACTACTGTTTAGTA
CCAGTCTGTAGAGATTGCATAAACGCTGAACATAATGGTCATAATTTCGG
TTATTTTAATCCTGCTACTGCTTTTGAGAAAACAACCCAAGGCACTGCTA
TGAACAATAATCAACAACAAACATCAGAGAAAGCTTTTCGTAAACTTGTT
GTTGATGCTAGAGTAGAGATCAAAGCGATGGAGGATGCTTTGATCAGTGT
TAAGAAAATGTCAGAGGATGTTGAAACTCGTAGTGCCAATGTGACAAGTG
ATGTAAAAACTACCGTCAAAAGACACATCCAAGCTGTGGAGGAGAGAGAG
AAAGATTTGTTGAGGAGAATCGAATGTATTCGCCAAGTCAAGGGTAAGGC
TTTACATTTGCAATCAGAACAGTTGAAACTAGCGATCAGTCGGCTCAGGA
TTGCTACCGATTCCTCTGAACTTAGTCTTGAACAATGTTCTGAGGAAGAT
TTTACAAAAACAACTGAAAACATCGTGAATGCGTTGAAAGGTGTTAAGAA
TCAACAGTCTTTGTTGCACCCATGTGAAGACGATTCCTTTCTATTCACTC
CGCCCGATTCGGCCCTTGAGACCGCCCTTACTTCAATGGGACTCGTGTCT
AGTAGTGCTTACCCACCCCTCTGCACTGCTATTGGTGAAGGCTTGAGACG
AGGAATATGTGGTAAGGCTTCAATGTTTACTGTTATTGCCAAGGATCACC
AAGGTGCCAATCGCTGTGTTGGAGGAGATGTCGTTCGAGTGTCTATCACA
AGTCCTGATGGTCGCGAAATGGTGGGAGAAATCTACGACCGCCAAAATGG
TAATTATTCGGTCACATATCGTCCTCAGTGTGAAGGCGAGCATATTATCA
ATGTTACCATTCGTGGCCAGCCGATTATGGACAGTCCATTCAAACTTCAA
ATCAAACTCGGTCGTAATTATGCCAACGTTGGACAGCCTATTTTCCATGT
TGGGTCTGAAGGAGAAGATGGAGGTCAACTGTGTCGTCCCTGGGGAGTAT
GTTGTGATCGAGATGGGAATATCATCGTCGCAGATCGTAGTAATAATCGA
ATCCAAGTTTTTGATTCTAAAGGTATTTTCGTGCACAAATTTGGAAGTGC
TGGCTCTCGTAATGGCCAATTTGATCGACCGGCAGGTGTTTGTGTTGATT
CTCAGAATCGAATTATTGTTGCCGATAAGGATAACCATAGGATTCAGGTC
TTTAAAATAGATGGAACATTTGTTTTGAAATTTGGTGAGCGTGGTAGTAA
AAATAGTCAATTTACATACCCTTGGGATTGTGCTGCTAATCGAGAAAATC
AAATCCTTGTGTCAGATACCAGAAATCACAGAGTTCAATTATTCTCATCG
GAAGGTATCTTTTTGAATAAATATGGTTTTGAGAATTCATTCTGGAAACA
TTTCGATTCACCTCGTGGTGTGGCGTTTAACCATGAAGGTCACATGGTAG
TCACTGATTTCAACAACCACCGATTGCTGGTTATTCACCAGGACTTCCAA
ACCGCACGTTACTTGGGAACGGAGGGTGATAAGAATGGACAATTTTTGCG
TCCACAAGGTGTAGCTATTGATCACGAGGGCAATATTATCGTGGCGGATT
CTCGAAATCATAGAATCCAGATTTTTCAACCCAATGGTAATTTTTTGTGT
AAATTTGGTACTTACGGAGAAAGTGTTGGTCAGTTGGATCGACCTTCAGG
TCTCTGTGTCACTCCTGATGGTATCATCCTTGTTGTGGATTTTGGAAATA
ATCGAATACAAGCATTTTGA

Coding sequence (CDS) from alignment at sc0000109_pilon:929681..932200-

>XLOC_038084 ID=XLOC_038084|Name=XLOC_038084|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5040bp|location=Sequence derived from alignment at sc0000109_pilon:929681..932200- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGAAATACAAGTTCGCCTTCAAACCGATGAAAACAGGACGAGGTC
AAAAGACAGAAATTTGAACTTTTTACATGATGTTATCAAAGAGATGGCTT
CATTCAGTCCGCAATTGGCCTCACGTGCTTTTGATAGTAGCAGCAATAAA
AGTTCCCAAGATGTCTGTGGATATTGTGGTGAATTGAGTTACGATGTTGA
ATTAAAAACTTTGCCATGTTTACATTCGTTTTGTGTGTCTTGCTTACAAC
GTCGTGTCGTGCGAACTTTAACCGGCGATCTTAACTTATCGTGTCCTTCG
TGTCACCGTGACGTCCGACTTGAAGGTGAAGATGGAGTCAACTCGCTCCC
TTCAAGTTCATGGATTCGTGATTATTTTGCAGATGTCGTGACTGGTGATC
GAGAGAGCACGCCTCCCAAACCATCGCCTTGTGAACGTTGCAGTGATTTC
CCTTCACCTCCTACTAGACGTTCCATCGATTCGCTACCACCAGGTTTGAC
AAATTTTTCGACCCCGCCATCAACTTCTAGTTCAGTAGCAACCTCACTTG
CGACGGGCCTCAGTAAACTGGCTATCGGTGCTGTACACCAACATCGAGTT
GAGCAAAAAACTTTTCCAAAACAAGTTCAACCACAACATCATTCGTTCGT
ACCTTCCTTACATTCTACAACCCTCTCTGCTGGACGATCACCTGTATTTT
GTGAACTCCACAGTCGCGAATATCAATATTATTGCAACTACTGTTTAGTA
CCAGTCTGTAGAGATTGCATAAACGCTGAACATAATGGTCATAATTTCGG
TTATTTTAATCCTGCTACTGCTTTTGAGAAAACAACCCAAGGCACTGCTA
TGAACAATAATCAACAACAAACATCAGAGAAAGCTTTTCGTAAACTTGTT
GTTGATGCTAGAGTAGAGATCAAAGCGATGGAGGATGCTTTGATCAGTGT
TAAGAAAATGTCAGAGGATGTTGAAACTCGTAGTGCCAATGTGACAAGTG
ATGTAAAAACTACCGTCAAAAGACACATCCAAGCTGTGGAGGAGAGAGAG
AAAGATTTGTTGAGGAGAATCGAATGTATTCGCCAAGTCAAGGGTAAGGC
TTTACATTTGCAATCAGAACAGTTGAAACTAGCGATCAGTCGGCTCAGGA
TTGCTACCGATTCCTCTGAACTTAGTCTTGAACAATGTTCTGAGGAAGAT
TTTACAAAAACAACTGAAAACATCGTGAATGCGTTGAAAGGTGTTAAGAA
TCAACAGTCTTTGTTGCACCCATGTGAAGACGATTCCTTTCTATTCACTC
CGCCCGATTCGGCCCTTGAGACCGCCCTTACTTCAATGGGACTCGTGTCT
AGTAGTGCTTACCCACCCCTCTGCACTGCTATTGGTGAAGGCTTGAGACG
AGGAATATGTGGTAAGGCTTCAATGTTTACTGTTATTGCCAAGGATCACC
AAGGTGCCAATCGCTGTGTTGGAGGAGATGTCGTTCGAGTGTCTATCACA
AGTCCTGATGGTCGCGAAATGGTGGGAGAAATCTACGACCGCCAAAATGG
TAATTATTCGGTCACATATCGTCCTCAGTGTGAAGGCGAGCATATTATCA
ATGTTACCATTCGTGGCCAGCCGATTATGGACAGTCCATTCAAACTTCAA
ATCAAACTCGGTCGTAATTATGCCAACGTTGGACAGCCTATTTTCCATGT
TGGGTCTGAAGGAGAAGATGGAGGTCAACTGTGTCGTCCCTGGGGAGTAT
GTTGTGATCGAGATGGGAATATCATCGTCGCAGATCGTAGTAATAATCGA
ATCCAAGTTTTTGATTCTAAAGGTATTTTCGTGCACAAATTTGGAAGTGC
TGGCTCTCGTAATGGCCAATTTGATCGACCGGCAGGTGTTTGTGTTGATT
CTCAGAATCGAATTATTGTTGCCGATAAGGATAACCATAGGATTCAGGTC
TTTAAAATAGATGGAACATTTGTTTTGAAATTTGGTGAGCGTGGTAGTAA
AAATAGTCAATTTACATACCCTTGGGATTGTGCTGCTAATCGAGAAAATC
AAATCCTTGTGTCAGATACCAGAAATCACAGAGTTCAATTATTCTCATCG
GAAGGTATCTTTTTGAATAAATATGGTTTTGAGAATTCATTCTGGAAACA
TTTCGATTCACCTCGTGGTGTGGCGTTTAACCATGAAGGTCACATGGTAG
TCACTGATTTCAACAACCACCGATTGCTGGTTATTCACCAGGACTTCCAA
ACCGCACGTTACTTGGGAACGGAGGGTGATAAGAATGGACAATTTTTGCG
TCCACAAGGTGTAGCTATTGATCACGAGGGCAATATTATCGTGGCGGATT
CTCGAAATCATAGAATCCAGATTTTTCAACCCAATGGTAATTTTTTGTGT
AAATTTGGTACTTACGGAGAAAGTGTTGGTCAGTTGGATCGACCTTCAGG
TCTCTGTGTCACTCCTGATGGTATCATCCTTGTTGTGGATTTTGGAAATA
ATCGAATACAAGCATTTTGAATGAGAGAAATACAAGTTCGCCTTCAAACC
GATGAAAACAGGACGAGGTCAAAAGACAGAAATTTGAACTTTTTACATGA
TGTTATCAAAGAGATGGCTTCATTCAGTCCGCAATTGGCCTCACGTGCTT
TTGATAGTAGCAGCAATAAAAGTTCCCAAGATGTCTGTGGATATTGTGGT
GAATTGAGTTACGATGTTGAATTAAAAACTTTGCCATGTTTACATTCGTT
TTGTGTGTCTTGCTTACAACGTCGTGTCGTGCGAACTTTAACCGGCGATC
TTAACTTATCGTGTCCTTCGTGTCACCGTGACGTCCGACTTGAAGGTGAA
GATGGAGTCAACTCGCTCCCTTCAAGTTCATGGATTCGTGATTATTTTGC
AGATGTCGTGACTGGTGATCGAGAGAGCACGCCTCCCAAACCATCGCCTT
GTGAACGTTGCAGTGATTTCCCTTCACCTCCTACTAGACGTTCCATCGAT
TCGCTACCACCAGGTTTGACAAATTTTTCGACCCCGCCATCAACTTCTAG
TTCAGTAGCAACCTCACTTGCGACGGGCCTCAGTAAACTGGCTATCGGTG
CTGTACACCAACATCGAGTTGAGCAAAAAACTTTTCCAAAACAAGTTCAA
CCACAACATCATTCGTTCGTACCTTCCTTACATTCTACAACCCTCTCTGC
TGGACGATCACCTGTATTTTGTGAACTCCACAGTCGCGAATATCAATATT
ATTGCAACTACTGTTTAGTACCAGTCTGTAGAGATTGCATAAACGCTGAA
CATAATGGTCATAATTTCGGTTATTTTAATCCTGCTACTGCTTTTGAGAA
AACAACCCAAGGCACTGCTATGAACAATAATCAACAACAAACATCAGAGA
AAGCTTTTCGTAAACTTGTTGTTGATGCTAGAGTAGAGATCAAAGCGATG
GAGGATGCTTTGATCAGTGTTAAGAAAATGTCAGAGGATGTTGAAACTCG
TAGTGCCAATGTGACAAGTGATGTAAAAACTACCGTCAAAAGACACATCC
AAGCTGTGGAGGAGAGAGAGAAAGATTTGTTGAGGAGAATCGAATGTATT
CGCCAAGTCAAGGGTAAGGCTTTACATTTGCAATCAGAACAGTTGAAACT
AGCGATCAGTCGGCTCAGGATTGCTACCGATTCCTCTGAACTTAGTCTTG
AACAATGTTCTGAGGAAGATTTTACAAAAACAACTGAAAACATCGTGAAT
GCGTTGAAAGGTGTTAAGAATCAACAGTCTTTGTTGCACCCATGTGAAGA
CGATTCCTTTCTATTCACTCCGCCCGATTCGGCCCTTGAGACCGCCCTTA
CTTCAATGGGACTCGTGTCTAGTAGTGCTTACCCACCCCTCTGCACTGCT
ATTGGTGAAGGCTTGAGACGAGGAATATGTGGTAAGGCTTCAATGTTTAC
TGTTATTGCCAAGGATCACCAAGGTGCCAATCGCTGTGTTGGAGGAGATG
TCGTTCGAGTGTCTATCACAAGTCCTGATGGTCGCGAAATGGTGGGAGAA
ATCTACGACCGCCAAAATGGTAATTATTCGGTCACATATCGTCCTCAGTG
TGAAGGCGAGCATATTATCAATGTTACCATTCGTGGCCAGCCGATTATGG
ACAGTCCATTCAAACTTCAAATCAAACTCGGTCGTAATTATGCCAACGTT
GGACAGCCTATTTTCCATGTTGGGTCTGAAGGAGAAGATGGAGGTCAACT
GTGTCGTCCCTGGGGAGTATGTTGTGATCGAGATGGGAATATCATCGTCG
CAGATCGTAGTAATAATCGAATCCAAGTTTTTGATTCTAAAGGTATTTTC
GTGCACAAATTTGGAAGTGCTGGCTCTCGTAATGGCCAATTTGATCGACC
GGCAGGTGTTTGTGTTGATTCTCAGAATCGAATTATTGTTGCCGATAAGG
ATAACCATAGGATTCAGGTCTTTAAAATAGATGGAACATTTGTTTTGAAA
TTTGGTGAGCGTGGTAGTAAAAATAGTCAATTTACATACCCTTGGGATTG
TGCTGCTAATCGAGAAAATCAAATCCTTGTGTCAGATACCAGAAATCACA
GAGTTCAATTATTCTCATCGGAAGGTATCTTTTTGAATAAATATGGTTTT
GAGAATTCATTCTGGAAACATTTCGATTCACCTCGTGGTGTGGCGTTTAA
CCATGAAGGTCACATGGTAGTCACTGATTTCAACAACCACCGATTGCTGG
TTATTCACCAGGACTTCCAAACCGCACGTTACTTGGGAACGGAGGGTGAT
AAGAATGGACAATTTTTGCGTCCACAAGGTGTAGCTATTGATCACGAGGG
CAATATTATCGTGGCGGATTCTCGAAATCATAGAATCCAGATTTTTCAAC
CCAATGGTAATTTTTTGTGTAAATTTGGTACTTACGGAGAAAGTGTTGGT
CAGTTGGATCGACCTTCAGGTCTCTGTGTCACTCCTGATGGTATCATCCT
TGTTGTGGATTTTGGAAATAATCGAATACAAGCATTTTGA

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
XLOC_038084	XLOC_038084-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000109_pilon	genome	sc0000109_pilon:929681..932200 -

Properties


Property Name	Value
Aaloc	1-2520:2521

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XLOC_038084 (mRNA) -