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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:887663..891701- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038083 ID=XLOC_038083|Name=XLOC_038083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4039bp|location=Sequence derived from alignment at sc0000109_pilon:887663..891701- (Clytia hemisphaerica_ch_hm2_pilon)
ATAATGTTTTGGTTATTTTTTGCCCTTCTCTTGCTCATCGATAAAGCATA
TTGCTCATCATTAGTGAGCTGGTCAAAACCAGTCAATAAATCCATCGCAA
AATTAGTTGATGGTAAATTGGATCAATATCATTACATTAACATCAAATAT
GGGAGATTTACGAGACAAGCAAAATTTCAGGCTGTATTTCCTGCCATAAA
ATCTATTATTGAAGACTTGAGTGTGAATGAATGCCTTGATAGTTGCAACG
ATACACCTGGCTGTGTAATGGTTCTTCACAACACAGGGAATTACAAAGTA
TGCTCTCTCTACGACAAAACGTGTCGAAATGATGAATTTTTTTGTGTGGC
TGGAGGCACTCATCATACTTTGTACATAAGAAAGGTAAACATCAGCAGCA
TCTTGATGTAAAACATTTCGTGTATTAGACAAGGCAAGAAGACTTTCTCT
TCTTCTTTTATTTGACAACAATTTTATGAGAACAACAAGCAAGGCTCAAA
ATACCAAAAAAAACTAAACGTCCCAACCCGGTTATTTATTTTTGAAAATA
TTTTCAGCCATCAAAAACTGGTGCTCTACATAATCTAGTTTTGGTCCTTA
TCGGGGAAAACTTCGTCGGGGAAAAGTGACGAAATTTTGGCCAAGTGACG
AAAATTTTCCCCAACCTTAATGCGTTTACCAACTACCAGCAAGTGACGAA
TATTTTTTCCCCGACGAAAATTTTCCCCGATAAGGTAATTAGTTACCTTG
TTTTTTTGTGTCTTTTTTTTGGGGGGGGGGAGCTCAGAGGTAAAATTTGT
AACTCCCCCGGTTAAAGCTCTCCCCCTGGTTATTCTATTTTCGAACCAGC
CTGCTATTAGGGACCTTAGAGTAACTCCACCTTGTCATTTAAAATTCACT
TTGACACGACAAAGTTTTCTACATTTTATTTCTTTAAAAAGCGGCACAAA
CTTTTAATTTTTGTATAATTTGGAATTATTACAAACGGTTGGGAATAGTT
TTTTTCCAATTAAACGATAATCAAATACCAAAGTAATGAACTAGGATTTC
AAATACTAATTCAAATATCTAAAGCTGGGTTTCCATTCACCTAGCGGGCA
GTGCGCTGCGACCAAAATTTCCTTAAATAGCTCAATGACGTCAGAAAATG
TAAATATTTGTACACAAAGTTAGAGCTCTTTCGAGCGCTGGTGTGCAATT
TTGGTAGCTGAAAAATTTCAACTTCCAAAAGCGGGCGTGCGAGCTCATAC
AGTGATCAAATAGTTTTAGCCAATCAGAAGAGAGTAAACATGTAAAAAAT
TTAAAAATGTATACAGATTGTGATGAAGTCTTTTGAATATTTCGAGCACT
TCTTTTAAATCTCAAGATGAATGGAAATCAATCACTGGTCGCTAGTGCGT
TGCGACCACTTTTATATTTAGAATTCTGGTCGCAGCGCACTGCCCGATAG
GTGAATGGAAACGAGCCTTAAGTCGTAAAAATTGGCATAACTTTGGGATT
TTTATAATATAAACTCTTTTCTCTTTTTTTTTGTCCGGTTTGGGACACAA
AGTAAAGTTTAAAACCATCTCGGCGATTCGCCCCAATATAACAGTTATAC
AATTTTAGTTAGTTAATCATTTAGTGAGTTACCTTAAAGGAAGAAATTTT
GGCGGGAAGAAAATTTGGCGGATTTGGCGGATTTGACTGAAATCCGCCAA
ATTAAGTTCCCGCCAAAATTTCTTTTTTCCACCATCCGCCAAATTAAATT
CCCGCCAAATTAAACATTTTGAAAATATGATCTCTTTTAAGGTGTTTTTG
CTATTTTTTCGCTGTTTTGACGCCATCTTAAGGTTAAATTTTTAAGCGAC
CGCCAAATTAAATTAGCCTCCGTCTCGGAAGAGGACTGGGCCTGAATTTG
CGGACGTTTTCACAGTTTCACTTTCGTTTTCGGCTATGCGACAGCGTTTT
CAAGCAGAAAGCAGAGGAAATCTGTGAAATTATGGCAGGGAATGCTAACC
TATTTTCCCAGTGTTTCTCAAGATTGGAGCAAGATTATTGTTCTAGAAAG
TCATAAAGGCCTAATAGTTTTCAGATTTGTATGATTTCATCAGAAAAAAC
ATTTACACCAAAGCTCCTTATTGATATGTAAAGGCTACCAAAAATAGCAA
TGTCCTCCATCAGAACAACTTTAACATAATGGACAAGGACAGTCAAGAAG
TCTACTTTGTTGAAAATTTGCACAAAATACTTAGAGAAAATGGTACTATG
GAAGCCCATTCTATACTCCTAAATGATAGTTGAAAAATCAGCAGTTGAGA
GGGTTGATTAGAATAGAACTCAAAGCACACAATAAAGTATATACATATGT
ATTTGTCCAGAAAGAACTGGCATGTTGTTTGCTTTGTTTTGGTGTTTAAA
AATATGTACTTATCAGTCCTAAAAAAATATAAATTCGAATATAATGAGGG
CAATGAGTCTGGTTAAATGTTACTATATTTACAAGAAAGGATTACTGAAA
AAATACTACTGTATGTACTACTGATGAACTAAACTCAAAAACTAAAACTT
TACCATAAATTTACATTACGACAATTTAAAAATCTATCTTTAATAGCAAC
AAAGAAAAAAACATGGCTCAAAGCTTTAAAAACAGAGCTAGTCAGAGCTT
CAATTCAGTAGGTATAGAGCTTTCAAAATTTGAAAACAGACACTGCATTG
GTATTACTACAAGACATACTATCCACACGGTTTTTTCGATTCATGAAAAA
AAATAAAGTATTTATCAAAAAAAGGTTCTCTTTTTTTTGGTAATCAATTC
CAACAAACAACAATCAATATAACAGTTTTTTGAAAACCATCCCACAGTGT
AAACATTATCAACCAACTAAACTCACACCGCCAAAATTGTAAAAATAAGT
CAATATAATTTCTATCAACAATTTCTCGTAAAATGTTTTTTTTCCAACAT
TCTGATACCAATCATGGCTGGAGGCATCATGTGTAGAGTGACTGTGTGGT
ATTTCATTGCTTTTAATGATCACGATACCAAACATCAACCAAACAAAACT
GACGCAAAGCCAAATCTGTCGATTAAAAATTTCCATGACAGCATGAAAAT
TATAATTGAAACTTATCTCGTAAAATGCTTTTTTCAACATTTTGGAGGTG
TTCAAAGTTAGAGGTATCATATGTAGAGCCAAGAAATACATGAAAAGTCA
TTTGCTATCCCATTTGCCATGAGATATATGAGTCAACAAATCAAACAAAA
ACCAACAAATCATGTCTCTTCACTTTCATGTCACATCGTGTTTATATGGG
CTATCAGAAAGCCAATCCACAAGAAGAGCCATCTTCCTTTATTATGGAGT
GTTCCAAAACTATTGGTAGGTTGTTTGGAAGTAAAGAAACCCACACAGTT
TGTTTTATTTTGAAGATTTAACTTGAAAACAAACTGCATCTTTCCAGCAG
AAACTCATGTTTCAACCTGCTACATAACATTGGTCAGTCGGGTCTGCTAC
TAACATGTAATAGTTTTATTATAGCCGAGCTTGAGAATCCGTAGGCAGAA
CTTGTAACATGTATTATGTGTATAATTATGTCAGTCGACTTGAATCATGA
TACATTACTCACATTTCACTGGATGCATTTTCGCTGTGAAATTATCCGCA
AAATTTTCTGACCGCGTTCTGAGACGGAGGCTAATTCCCGCCAAATTTAG
TTTTTTCGTCCATCCGCCAAATTAAATTCCCTCTGAAAAAACTTTTTTGG
CCATCCGCCAAATTAAATTCCCGCCAAAATTTCTTCCTTTAAGGTACTCA
TGTATCATTTACAGAAAATTTGAAACATCCCTAGGAAAAAATAAAAGAAA
TGTGTCCAAAATATGGCAAAACCTAAACCGCGAAAATTAATTCCCGCCAT
TGCGGTTTTTTTTTTGACCACGAAAATTAGTTTCCTTAAGGTAAGTTAAC
TGTCAAGCAAATCATTAACATTAACTTCCTTCTAATCTTAGAATCCATGC
GACGATTCATCATTGTGCAAACACGGCAGTTTTTGTCGA Coding sequence (CDS) from alignment at sc0000109_pilon:887663..891701- >XLOC_038083 ID=XLOC_038083|Name=XLOC_038083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=864bp|location=Sequence derived from alignment at sc0000109_pilon:887663..891701- (Clytia hemisphaerica_ch_hm2_pilon)
ATAATGTTTTGGTTATTTTTTGCCCTTCTCTTGCTCATCGATAAAGCATA
TTGCTCATCATTAGTGAGCTGGTCAAAACCAGTCAATAAATCCATCGCAA
AATTAGTTGATGGTAAATTGGATCAATATCATTACATTAACATCAAATAT
GGGAGATTTACGAGACAAGCAAAATTTCAGGCTGTATTTCCTGCCATAAA
ATCTATTATTGAAGACTTGAGTGTGAATGAATGCCTTGATAGTTGCAACG
ATACACCTGGCTGTGTAATGGTTCTTCACAACACAGGGAATTACAAAGTA
TGCTCTCTCTACGACAAAACGTGTCGAAATGATGAATTTTTTTGTGTGGC
TGGAGGCACTCATCATACTTTGTACATAAGAAAGATAATGTTTTGGTTAT
TTTTTGCCCTTCTCTTGCTCATCGATAAAGCATATTGCTCATCATTAGTG
AGCTGGTCAAAACCAGTCAATAAATCCATCGCAAAATTAGTTGATGGTAA
ATTGGATCAATATCATTACATTAACATCAAATATGGGAGATTTACGAGAC
AAGCAAAATTTCAGGCTGTATTTCCTGCCATAAAATCTATTATTGAAGAC
TTGAGTGTGAATGAATGCCTTGATAGTTGCAACGATACACCTGGCTGTGT
AATGGTTCTTCACAACACAGGGAATTACAAAGTATGCTCTCTCTACGACA
AAACGTGTCGAAATGATGAATTTTTTTGTGTGGCTGGAGGCACTCATCAT
ACTTTGTACATAAGAAAGAATCCATGCGACGATTCATCATTGTGCAAACA
CGGCAGTTTTTGTCGAAATCCATGCGACGATTCATCATTGTGCAAACACG
GCAGTTTTTGTCGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109_pilon | genome | sc0000109_pilon:887663..891701 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 385-432:49 |
| Aaloc | 1-384:4040 |
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