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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:1052417..1056388+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038077 ID=XLOC_038077|Name=XLOC_038077|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3972bp|location=Sequence derived from alignment at sc0000109_pilon:1052417..1056388+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTCAACATGTCATAGGTTTGTTTTAAAGTAAACCCTTAGATTTCGAGGG
ACgcgataaaaattttaaagtccAATAGTTTTGACAATAGCTCTTTTACA
CTTAGTTTAAAGGGATTTAAGCCGAATGCTTTTATTAAAGGtataaaata
gattttaaatgGTACCCAAAAATGCGCTCATATAATTCTCAAGGCAATAA
GCTTTTATGTCATTTCGAAATTATACTGACTAACAATCTGAAATTAACAA
CCTTTACacctcatttttctcacttgTAATTCCCTTTAAGTTTGTCTGAG
ACCACtccgggtaacttaatgcatgtcccagaattgcattaatttttccg
ccccagttccactccctaaaccataacaaactatacatttttggaagcat
aTTTGTATGTAGAATActgtattcggtgtaacttaaaaattttttcagta
taattagagatcttaagaaaacctgattatgtcatgattgatgacgtcat
aaaaacaaaaagttgaatatctcgagaaatataaataaaaactttatgaa
atttgaaccagtgataaagtacattgggatgtttcaaaaagttttgaaaa
tatttcccaaaattaatgacgtcagcagaaatggcaagaattcaaatttt
tgcgataaaatgctgacatcagcaaattttcaaatttttggaaaaaaatt
ctcctcctcttgatgagttctaCTATATATtggaccaaatttcataaagt
ttcgagtattagttcttgagatattcaacattttaaaattatgacgtcat
gaataATGACaatcacgttttcttaaaaaaactcaaattctgctgagaaa
aaaattaagggctctgaccatagtgaatttttcataattgctgtgtttaa
aatgtgttttctggaCTGATGTAATCAACAAAactatgacatgttataca
ttttctgttatgTTAGACAAACTtatcctgaatctgaaaattcaaaaatt
gcattgaaaaaatttgaagaagaagaaaagaaagacttttgcgaggaaga
gtatttcaactttgaagagcttagtttcggcgaagaaaaaacattttgaa
aaaattttcgcagtagatggtgtatcttttaccgaacaataaaatttttg
cggaaaatttttgtaaatgcttctttgtctccaaatcttcaaaatagtgg
tttttcatcaatttttatctggattttgcttaaaaaaaacagtcataact
tttgatacatcgttttagaaaaattttccgcaaaatttaaaatagttcaa
ctctttgcggacagtgtaaagaaattttgaaacaaaaaagttaattaccc
attaaaactaagcactttttgtaaaagagggtgatgcaacatatttatta
acatctttttaaagttcataacgtcatttttgcaattaaattcttaatta
ctcttaagggatacgattaaaaagcaatttataaaggcaattctttgtta
aaagtcttaagaaacctgaaatataacttctatgttcaaataccaaaatc
aatttttggactatggtcagagcccttaagttacACCGactacggtattc
tacatctaaatatgcttccaaaaatgtataatttgttatggtttagggac
tggaactggggcggaaaaattaatgcaattctgagacatgcattaagtta
cccgagcaTGGAACTCCACTAAATTCATTAATCTGAACTACAAAATTTTA
CCAAATGGCTGTGTACAAAATCAATCCCTAACTTCCCAAAACCCTAATCT
TATTAAGTCCATTGGTAACCAAACAACCTTAAAAATAAATCTAACGTGAT
GAGATGGACGTCCTTTCTGTTCTTCTAACCAGGTtagaaaaatagatttt
cttcCTTTCTAGGAACAAAGTCGAGATTAGAGTACGTACAATACGACTTG
GAGAATGACGATGAATGGGTGGCAGGAGAAACAGCTTTTGAAGAGCCATC
TGCTTATGGTGAAATCACCAAGGACAAGAAGCATCTTAAACTGTATCATT
GCTACTATGAACCAAGTAAGAATAAATTAAACATTTTCACCAAGTCGTTT
TATCAAGACTATCTTCATTAGATTAGATCATGAAATCTGACgtgattttt
cgaaaatctttgtGATTTTCAATCTTTACCACTTTGATTCTCTTGCAAAT
CCATAAAATTAAATCCTCCCTCACCGCTATCAAAGGAAAAGAATTAAAAT
CCGTATCCAAACAAATTTTTCAGTACCAAGCTGTGGAGTACCAACATTCG
GTTCGAACAGTATCGATTACAACCAGAGTGAATTCAATGTGGGTCACAAA
CTTAACTACGCTTGTCCACGTGGTTTTTCAAATGCAGGGGATTCGAATGA
TGTATGTTTGGTGGAAGAAATGTGGTCCAGTCTGGAAGGTGCTAACTGTG
AAGGTAGTCAAATTGTGATAATAGACCTATCAACCTGGAGCCTGGGCTCG
AGTTTACCTGGAAGGATGACGTCAAAAAGTCGTTGGATTTTCATTATaga
acaaaaattttgacgtcaaatcctTGTAAATTCATCACCTAACCTCCTCA
AAAGCCGATCGCACCgttaagggttgataggtgtaaAGACTAAACTTAAA
GGCAACCCGTTTCTTTGGCAATGAACTCTCCTCCCTACTGGTGAAAATCA
CTGAAAACtgaaattgaataaaatttaaaatccaagTCATTTAAAACAAC
AGATTTCCCATTCCATGtttttttCATCGCTGACCAAAGAATTCTCACCA
AGTCGTTTTTTATACAGGGGTGTGTCTAAAGGTAAAATTCGTATGATAAC
ACATTGTAGTATTCTCCATCAGTTTTATAATCCCAGTTTTCAGAATCTGA
TATTTCCGACAGCACGCAGTGTCAATTCAAGATATATGACCTTAAAAGCA
TATTgggtaatttcaaaataaaacctttacaCCCCTGTGGGCGACAggtt
tttttgtatatttttttatttggaaatcctgagaaattttgaaaaaggtt
ttggaAATTACAGGATTTTCCTAATTATTTGGTCATCCTTATCAGAAAAT
ccagtttttcaaaagtaaattgttacgGAAAATCCATGTCGTCCACAGGG
AGTAACGACTATAACTGCCCCATTGTTGGGGCAATAGCTCAAAATAGCTA
ACACCTTCACTCTTTATCCtttttttAAATCGAAGATATCAACGAATGCG
TCAGTAAAAACCAGGTCACTCGTCACCAATGCCACCGCAAAGCAAACTGT
TACAACACACCTGGTTCTTATCGATGCAAATGTAATCCTGGTTGGCAAGG
CAACGGAAGAAACTGTTATTGTAAGTAAAATGGTTGTTGCAGCCACTGTT
TTGGAACCTCAAGATTGTAAATGACCATCAGTGGTCATCAACACTGTACT
AACATTTAGCCAATTTAAGGAGGTCCTCCAGCGTACCTTCAATTCATGCA
ATTTTTATTCGCAATCCACGCGATTTCTGTTCAcgcaaaattttccaatt
cacgGATTCACgcagtctttttttaattttcactcaTTCACgaaagtgaa
aaagcccattcacacaAACCACTGGGGGCATAAAGGAAGGCTTCAGTTTG
AACCTTTCGGCCTATTTGTTAAGGATACAATATGCAAAATCTTTCTATAA
AGTTTTGggttattttggtatttttggcAAAGTTCAAAACGTATTCAAGT
AACGAAACCTATTGCTTTTGTAGTTGCTTAACCTTTACTAAAGATTTCAG
TCTTCGTTTGAAATACAATCTACAGCTTGTTTCAAACACAAAATATCGCA
TAATATTTTCctacaaatatatattttcagtCACAAATTGTACGCGACCA
AAGCCTATAGCGAATGGTGAATTGAGATTCTCCAGTGACAGCAGAACATT
CTTACTGAACGATCAAGTATCT Coding sequence (CDS) from alignment at sc0000109_pilon:1052417..1056388+ >XLOC_038077 ID=XLOC_038077|Name=XLOC_038077|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1152bp|location=Sequence derived from alignment at sc0000109_pilon:1052417..1056388+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTCAACATGTCATAGTGTCAACATGTCATAGGAACAAAGTCGAGATTAG
AGTACGTACAATACGACTTGGAGAATGACGATGAATGGGTGGCAGGAGAA
ACAGCTTTTGAAGAGCCATCTGCTTATGGTGAAATCACCAAGGACAAGAA
GCATCTTAAACTGTATCATTGCTACTATGAACCAAGAACAAAGTCGAGAT
TAGAGTACGTACAATACGACTTGGAGAATGACGATGAATGGGTGGCAGGA
GAAACAGCTTTTGAAGAGCCATCTGCTTATGGTGAAATCACCAAGGACAA
GAAGCATCTTAAACTGTATCATTGCTACTATGAACCAATACCAAGCTGTG
GAGTACCAACATTCGGTTCGAACAGTATCGATTACAACCAGAGTGAATTC
AATGTGGGTCACAAACTTAACTACGCTTGTCCACGTGGTTTTTCAAATGC
AGGGGATTCGAATGATGTATGTTTGGTGGAAGAAATGTGGTCCAGTCTGG
AAGGTGCTAACTGTGAAGTACCAAGCTGTGGAGTACCAACATTCGGTTCG
AACAGTATCGATTACAACCAGAGTGAATTCAATGTGGGTCACAAACTTAA
CTACGCTTGTCCACGTGGTTTTTCAAATGCAGGGGATTCGAATGATGTAT
GTTTGGTGGAAGAAATGTGGTCCAGTCTGGAAGGTGCTAACTGTGAAGAT
ATCAACGAATGCGTCAGTAAAAACCAGGTCACTCGTCACCAATGCCACCG
CAAAGCAAACTGTTACAACACACCTGGTTCTTATCGATGCAAATGTAATC
CTGGTTGGCAAGGCAACGGAAGAAACTGTTATTATATCAACGAATGCGTC
AGTAAAAACCAGGTCACTCGTCACCAATGCCACCGCAAAGCAAACTGTTA
CAACACACCTGGTTCTTATCGATGCAAATGTAATCCTGGTTGGCAAGGCA
ACGGAAGAAACTGTTATTtCACAAATTGTACGCGACCAAAGCCTATAGCG
AATGGTGAATTGAGATTCTCCAGTGACAGCAGAACATTCTTACTGAACGA
TCAAGTATCTtCACAAATTGTACGCGACCAAAGCCTATAGCGAATGGTGA
ATTGAGATTCTCCAGTGACAGCAGAACATTCTTACTGAACGATCAAGTAT
CT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109_pilon | genome | sc0000109_pilon:1052417..1056388 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 487-576:3883 |
| Aaloc | 352-483:3238 |
| Aaloc | 172-348:2276 |
| Aaloc | 19-168:1915 |
| Aaloc | 1-15:1 |
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