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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:1044095..1052356+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038076 ID=XLOC_038076|Name=XLOC_038076|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8262bp|location=Sequence derived from alignment at sc0000109_pilon:1044095..1052356+ (Clytia hemisphaerica_ch_hm2_pilon) CCACCATTGAAAGTTGATCAAGCTGCATTACTCAAAGAAATGAAGTATAA
TATTAACTTTAAGAAGAAAGTCAACGCGGATTTCAAGTTAGAAACTCTAC
AAGGTGTTGGTAGATCCATCCATGTGAAGATCATCTATCAATGTTTCAAT
GCGACTGGAGGTATGTTCTAAGATTAGAGAACTAAACACGTGCCTTACAC
TTTGCCGAAATAAAACCAAATGTTTATCCAATGATTAAATGTCAAATGAT
TACGTTCAAAATATTCATTAATATCTTCGGACGGGGTTTCCAACAAGTGG
GAATGGACAGGATGCTAGGGGACAGGtttttttACCGTCAGTAGTTTTAC
TGTCCTCGACTTTGTGgttcagaactgcgggttattccaaatcgcttcag
tcactccacTGTCCTCAAAATGCAAAACATAAACTCGCGTGGtcttcgtg
atggcgtgattggtgttttttcaagttcgtgattACGTGATCtaagattt
aaagttcgagattgcgtgatcggaggaaccaacgtgatcaacgtgatcgt
gatagaaaggaaATCTAAATCGCGATAACGTAAGgtgactgggggggggg
gcttttctatgcaagtaaataaaatttcttagaTAGCCACTTCAAAATAC
AGTGGATTTTCATTACCTTGAaacttctataactcgaatatttTATTAAA
TAGAACAAGTTTTAGGTCTCctcagttaacaatgctttatAAACCTCTCT
ATATGACTCGAAACTTCCTTAACtaaaacaagaagccggagcggcatgaa
ggtccagctgacgtgacAATAgccgaatgtcgttcgtaccgggttcctta
agtgacgcaaaaaaattgccttcccatcctccactctgagcttctattct
ttgacactttttttgtattgctaagtttagaaagtttttgatgcatttcc
cgaaatttcgaaacttttgtgGCTGATGGGAGTCGAACCCACCATATCAA
AGTAACTATgattagaacgccagcgccttaaccactcgatcatcgagtca
caactgcattaaggagttcaaagttgcttaaaaacatgatatttactcca
aactctacccgggggctaaaaccctaaccaggggttaactcccatctcaa
accctagccctaaccctacctgaaacaaccctttaatctaaccgggaaat
ttgactctactaccaattcaatccaaaacataggtcaaacatcgcgcggg
taggcgggccaaaaattctagatcggcggttggtttagcctggacttgtt
aatctATTGCGCGCACGggcccgacaaagacaaaatcttttcgatcagtt
gctttttaaaggtccattctgctgcgcgctggaccaacaaattgcttttt
ccccgtgcgtgttcgagttgtGATTTTCCCACTAAAACCATCCCTCGTAA
TGGACACGATAGGGTCTCCTACCTATTGAAGGTATCGACAAAAATCTTCC
TCGGGAGTGAAATCttcagaaatttgattttattttctaaaagtttactc
ttaggttccaaataaacgggggggggggggggggttcgataaacgggggg
gggttggaaaatttcagattttaataaacgggggagacctaattgccggg
gggggtggaaatttacttctgaaacccaaaaataaggtaaaaataggcta
aaactacgctatttaaagcaaaataagggaccttctctttgacgctgaaa
atatttttctaacgggggggTCCTATAGGTCCGGGGGtggttgaaaattt
tcgaaaaattaacaagcgggggggcccgtttatttggaacctaagagtag
tgaTTTAAGTTAAGTCCCCAACCATTAAAGAGGGCAATTTCTTTACCTTA
TTGGTATTCGGccctttttcatcattttagcgaccgtagtgcagtggtag
cgcatccggctacggtgctcAAAGACGTGGGTCTACTCCTCGGCCGGGCC
ATACGCAAGACTTTGTACTTAAATACAATAATGGTACTTGGTgcttctct
gcttgatgctcagcaattaagagaaagaCCAAGGTGGAGCAGTCCAGGGT
GAAAGAGTGGGTAGATAGGCTATTGAAAGAGGAGTCTTCGGGTCGCCTCT
GACTGCGATCGCAGACttacatacagttgacgctctcttattcgacgttc
tactattcgatacgctccattattcgataatattgataGTCATAGCCAAC
AAGAAacactcataaacgacgctctactattcgatacactcccttattcg
atggaaactcgattccccttgaaaataaGCGTCAACTATAATTTCAACTA
TATTTCATCTCCACTATTACCATATTACTATATGAGATGACTTTTACATT
GCTTCCCTTACAGGTAGTCAAGCACAATGTGAGGAAGAAAAATTCGAAAC
TTTCTTACAAGGGGTCTATCAAGAAGGATGTCAATGTATGACTGTCCCCT
CAAACGAAGATGATTGGAACAAAGAGATTTGCTCAGGTTTGGAAATATCC
TGCTTACTTCCGCAGTAGTGGATGTAAGGGGGATGCAAAATTCACGACGA
AAAGTGTTTCTTTTTTACGTGTACTGTACATGTACGTGCAAAGTTTAAGT
GTAGGGAAATATTGAGCTTTCAAAGTTTTCTCTCCGGTGGCactaaagaa
aaattgatttaatttttaaacTAAACTAGACATTTAGAGTCTACTACAAT
CTCCTTTTCCTATTTAGGTGCTGAATATTTTGGCTGTTCAAATGCATCTT
TACAACAAGAAGCTATACGGGTCAACCTGACCACTTTTTTATCTCCCAAA
GTTTGCATTCGTGTCTGTCAAACAATGGGTTACGCTGAAGCCGTAATTGG
CGGAGATAATGGGTGTTATTGTCAAAACTCAGGCTTGGAACTCGAGAGAT
CATACGTCTctgaagaaaaatgttttagtGCTTGTAGATACGAACCGGAC
TTTAGTTGTGGGAACAGTTCCTACAAGCATTTATATACAACAGGTACATA
AATTATTCCTTTTAACACATAACGTCGGTTGAACGTTGTCTTAAGGTTCA
TCTTCAAACATCAGATGGACGTTGAAAAACGCTATGTACCTGTAGGAATT
CCAGAAGCTATCTTTTATACCAAAACACCCATATATATGCCACTAGTTTC
ATAGTTTCATAGTTTCATATTAACATGAAAATAGGCATAATACCTAATAC
GTTAATATTTGGGATAAAGGTTGAACCAATTAATAGGGTGCTCTTTTCGA
GACACACAtatgtcaaaaattttgttttattacacccctgtcccacagcc
ccagtggaacttttttccgcggtagggataaaaattcctattgaaatccc
aattggGAATGGTtctggagtacaatttttaaacattgaatttcgagtgg
ggatgaaatcatagtcaatttcccaatggggctgaaattccaaggTATAT
TCATCTCGCCGGAGACgtaatttttaccaaattttccagtggggccgagg
ttccagcgggtctgtgacacaggggtgttttattaGTAAACAGCTGACAT
TCTGTTTGAATTAtagtagtagtaaaaatagtaaaatagtaaaaaaatct
GATTGTCAGGTATGATGGGACCATTGGAATCATCAGATGGACTTTGTTCA
AAGAGCGCATGCGTCAATGGAACATATTGCGTTCGAATGTTCGATACAGA
ATTTTGTGTTTGCAATCAAACATCAAGTGCAAAGCCTGAAGAGTGTTATG
GTAAGAAATTATTTACGCACGTAATAGTATGAGACAACATGAGATGTCGA
CAGTTTTCAAAAAGCTTCTATCAAGAAGGGTTAATTTCATCACATAGACt
atatgctatagtctaagacaaatcactatctaagaaataagctcaaagcc
gaagaaaatttgccaacgggttttttgccgaaaagagtttacaatcggaa
gagtttgccagtcttcgaaactctcccacCGATTTTTTCTCCGTATACTG
ctataacgccataccgccatatttttccgcctttactatcactgtaacgg
acgataagcTGAGATGAAAAATTTTGTGCATAGAAATTCGAGCTCGCAAC
CAATGACGCTATACTATTGTTTCGCAAAAGTTGGCAAAGAGTTGGCCGTC
TAAGGTCAAACATAGACAGCCCACTTTGTGCCCACTTTATGCCAACTCTA
GCAATTAGAATAGGTAGGGCTAAAAGTGGGCCGACTAAACCAGAGCTAAC
ATCGTCTATTCATCACCGTGATCTCAGACATGAAAGCAAGTCCCCTCTTC
TTTAAGGTTGAAAATAGGGAAGTAAGTTGGGAttaacaaaatatgaaatg
TTTTCCAATGGAAATTTAGTTAGTCTTagacctatttttccagtggaaag
ggaGTTTCATCGGAGCTGTGATGAAGGAATGTTCGAAAAATCATTAATCC
ATATAATGGAACTTATGAAGGAAAATATAGTAAACTTTTCTCCTTGCGAC
CTTCAGGTTGCTTAAATGGATGGACAGCTATCATTGGACAACCAAATTGT
TACTTCATCACCGATCTGCAACCTCTCCTCAAGTACCAACTACAGCAATA
CTGTCAATCGATTTACGGGCGGGTCGCAGTACCTCATGATTTTCAAGCTG
TTACTCAATTCATGCGTCtcatattgaaaaattttgtggaGAATCGTTCA
CATCATCAAATTGAAGCAGATATTAAAGAGATAATTAAAAATGGAGACGA
CTTTTTAGCGAGAGGTTTTCCACTTTGTGAAAGACCCAAAAGTAAGTGTT
TGCAAGTAAAGTATCAGCAAGGGACCTTGCGTCTTTATATTCTACACCTT
TTAGCTTACAAAGGGTCCTTAAATTCAACACAAAAAGGGAAAATTATCAA
AaggccccaggggggggggtcactcaTATGGTCtgacccacggcatgtgc
cgcccttaagagTAGGTTTTTCGAGATCCTCAAAATGCacgggtgtactt
ttgatattttatttattttccaatttatttattGTTGGTCTGCCATAGTA
ATAATAAAATACTAATTAATACCAACCGTAGAGAATAAACTAATTATATA
ATGAAGAATataagataaaaattttttttttatatacatattttacaaag
acaaatatttGTGAGGCTTATTTCTTTCAGTGAGGATTTAAAAGTTTCGA
TAGAGGATTCAAGCTTGATTTTTTCAGGGATCTGATTCCAAAGCAGGCTT
CCTCGAAATAAGAAAGATTGAGTTCCGTAACGTTGTGAATTAGCCTTAGG
TATAGACATTAAAACTTTGTTTCGGAAGTTGAATTTTATAGATTGATAGA
GCGCACTACAAGGGTCTTATTTCAGCTAGATATACTGTAATAGTgtgttt
tgggaatttttaCTGAATTCTACTGAAAATAAGTCTGACAGttaaaatct
gatgtatctttatagttttgactcatACCCAATCttatttgttttgcaca
ttgtgtcgacattactggctcattttcaggtggcttcagcaaaataagat
atgaaatcaaagcaCACTGTAAGAGTCAGAAAcattcggtaaaatgcact
gtaagatACCTTTTCACTACTCaagagctgcactgtaagggtccgatttc
gaaagccgtttttttagctgcacatgccgtcgttaagaaatcgagtgccc
cccctcCCCGGGCAAAAGGCTCAGTCAGTCAATTATTTGGTCGTATAGTT
TCTTAAGATTCCCTTTGATTTCTACGATTTGTTCGTTATAGGTTCAACGT
TACTAGTTCAATCTGGGCCTCAATTTTTACGTGATTCAAATAATTTCTCA
CGGTGTCAAGGTTGTATGTAAAATTATGACTTATTGTGTTCGACTTTCGC
CTACGTCAttagagaaaaaaggaaaaagttttAATGAAAACTAGACTTTT
CGTCGGAGATTAGTAACAAAAATATACGAATAAACCACAAAACGAACGCG
TTATCCTCGTGGGACTAATCCATGTGGATAAGAATTTCTTGTTAACTAAC
AGTTTAACTAAAAGACATAAAAGGAAATTTTGGGAATTAGTCTCAAAAAG
CTTCTTTTCCTAGAAAAAGAGAAACGAAAGCACGGGGAGGGGTGGTTTAT
TCCTGATCTTACCTATCAATTCCTAGTAACCTCCTtttaacccggggggg
ggggagcttAGGAAAAAATGGGTGTtgagtatgtgcggacggtaaaggtc
gttttttcacctttcaaagtctctttaagggtcggaaaaatcagaaagtt
ttaaattagcctattaagggtcggaaaattcacaatgtttaggaattttt
tggtttcgagagaaaaaattgtaaaaaagtctctctaaggataggatttg
tttttaaaatataagcaaatttttcaaaaaagtctccctaagggtcacct
tttcggcaaaaatcagtctctctaagggtcggtttttggaggtcctgTCC
GATCCggacatacccctcattcgccaaccctagtaccccccccccgtaaT
TCACTAATAGTGAGCTTTTTTATCTATTCTTTTGGGTGGTAAAGACGTGC
CAAAAAACGGTTTGGAAAACCCAAAGTTGACCCGCAAAAGTTGATTTACA
GTCAGCCAGGATCTAACCAATTGAAAGCCTAGCTGTTTCATCCACCGTAG
AAAAAACATCATAGATAAACTGGATGTTTGAATTTCTCCATAGCTGAAGT
TACTGGTAGATACCCGTGGACTAAATGGCCTAAAGGCACTTATGGTTTGC
CAATGTCCCGCACAGGCTGCCCTGTACAAAACCATTTCGAATGGAGAGCA
GGTTCATATGTACAGAATACAGAGAACGATAGCAACGCAAACGAAGCATC
ACATGACCTTCATCTCCATGGCAATGTAAATAAAGGTAGTGAGATCTTTC
GATTTGTTGATCTAAATATTCTTTAGGTTAATAAGTaaaaaCATGACAGA
TTACCTGGCGTGTATCCAAAGCTTTATCTTAATTTTACTGATGAACGTAA
TAGTGAACGACGACCAAACCGAAAAAAAACGCACAAACTAGGTTTGATGA
AGGATATACATTTTTGACGGGGGTGTATCATTATCGTGGAAAAATCTAGT
AAAAAAAGTAAATTCTTTATTTTAATGTTCAGTTTCACGGAATAAATATT
CGATACATCTAAAGCCTGGGGAACTGCAGCGTAGACTAAAAATAATTATA
TACACTGCTTCATATCTTTACATTTATCCATTCCATAGGCAACATCACAA
GTCATTATTGCATCAAGACGGATCCAGTAGGAAATACGTCCTGGCCTGAT
GGGCGGTATTGTATCTACCGTAAAGGCGGTAAATGTCCGGATAATATGGT
GTCTAGTGCGATCTTTTGGGATGATGAAGATACAAACAATAGAAATAAAG
GTACTTAAGAGTTGAGAAAGTATCGTTTGTaaactttttggagaatatct
tattggccaaaacttagtcgaccttaattttagtcagtcttaattattag
tcggccctaattttagtcaccttgtcaaaatttagtcactaagggcagcc
taataattaagaccgactaaaaattatatattcgtaaattctttgttaaa
gcAAAACCAATATGAAAAATGGGTTAAGGAAAGctaaattataaactttt
aattggcccaaatttttagtcggcccaaattttagtcaccaagcccaaat
ttagtcactaagttttggccgataaggtaagcagaaaaaaagaagtgaat
tttgactgggtgaattttttcttttacataaAATAGGTGTAATGAGGAAA
TATCAGTGctgttatttttgaaaataacagaAAACTTAAATTCGGGGGAA
AGCTTGGTGAGaacctttttggaaatttttaacaGGCTCGCTAAATTCTC
CAAGataaattttcatcaaagaaTTTAGCGGATGGTATAAAACAAAAAGT
CCCCAGAAGGCAAAATCTTTAGCTTAAAAAAGCTCGTCTAGAACAAGAGC
AATAAACATATTCCCACTTTCAACGTGTGCATATTCTAACAATTTCATCC
AACATCCAatctaaaattatatttctccTCAGCGGACGGCGTGCATCCAG
ACGGTATGTTCAAAGCAGACACCATCATTCAATTTTGTTGCATGGATAGA
CCGTTGAATAAG Coding sequence (CDS) from alignment at sc0000109_pilon:1044095..1052356+ >XLOC_038076 ID=XLOC_038076|Name=XLOC_038076|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2838bp|location=Sequence derived from alignment at sc0000109_pilon:1044095..1052356+ (Clytia hemisphaerica_ch_hm2_pilon) CCACCATTGAAAGTTGATCAAGCTGCATTACTCAAAGAAATGAAGTATAA TATTAACTTTAAGAAGAAAGTCAACGCGGATTTCAAGTTAGAAACTCTAC AAGGTGTTGGTAGATCCATCCATGTGAAGATCATCTATCAATGTTTCAAT GCGACTGGAGCCACCATTGAAAGTTGATCAAGCTGCATTACTCAAAGAAA TGAAGTATAATATTAACTTTAAGAAGAAAGTCAACGCGGATTTCAAGTTA GAAACTCTACAAGGTGTTGGTAGATCCATCCATGTGAAGATCATCTATCA ATGTTTCAATGCGACTGGAGGTAGTCAAGCACAATGTGAGGAAGAAAAAT TCGAAACTTTCTTACAAGGGGTCTATCAAGAAGGATGTCAATGTATGACT GTCCCCTCAAACGAAGATGATTGGAACAAAGAGATTTGCTCAGGTAGTCA AGCACAATGTGAGGAAGAAAAATTCGAAACTTTCTTACAAGGGGTCTATC AAGAAGGATGTCAATGTATGACTGTCCCCTCAAACGAAGATGATTGGAAC AAAGAGATTTGCTCAGGTGCTGAATATTTTGGCTGTTCAAATGCATCTTT ACAACAAGAAGCTATACGGGTCAACCTGACCACTTTTTTATCTCCCAAAG TTTGCATTCGTGTCTGTCAAACAATGGGTTACGCTGAAGCCGTAATTGGC GGAGATAATGGGTGTTATTGTCAAAACTCAGGCTTGGAACTCGAGAGATC ATACGTCTctgaagaaaaatgttttagtGCTTGTAGATACGAACCGGACT TTAGTTGTGGGAACAGTTCCTACAAGCATTTATATACAACAGGTGCTGAA TATTTTGGCTGTTCAAATGCATCTTTACAACAAGAAGCTATACGGGTCAA CCTGACCACTTTTTTATCTCCCAAAGTTTGCATTCGTGTCTGTCAAACAA TGGGTTACGCTGAAGCCGTAATTGGCGGAGATAATGGGTGTTATTGTCAA AACTCAGGCTTGGAACTCGAGAGATCATACGTCTctgaagaaaaatgttt tagtGCTTGTAGATACGAACCGGACTTTAGTTGTGGGAACAGTTCCTACA AGCATTTATATACAACAGGTATGATGGGACCATTGGAATCATCAGATGGA CTTTGTTCAAAGAGCGCATGCGTCAATGGAACATATTGCGTTCGAATGTT CGATACAGAATTTTGTGTTTGCAATCAAACATCAAGTGCAAAGCCTGAAG AGTGTTATGGTATGATGGGACCATTGGAATCATCAGATGGACTTTGTTCA AAGAGCGCATGCGTCAATGGAACATATTGCGTTCGAATGTTCGATACAGA ATTTTGTGTTTGCAATCAAACATCAAGTGCAAAGCCTGAAGAGTGTTATG GTTGCTTAAATGGATGGACAGCTATCATTGGACAACCAAATTGTTACTTC ATCACCGATCTGCAACCTCTCCTCAAGTACCAACTACAGCAATACTGTCA ATCGATTTACGGGCGGGTCGCAGTACCTCATGATTTTCAAGCTGTTACTC AATTCATGCGTCtcatattgaaaaattttgtggaGAATCGTTCACATCAT CAAATTGAAGCAGATATTAAAGAGATAATTAAAAATGGAGACGACTTTTT AGCGAGAGGTTTTCCACTTTGTGAAAGACCCAAAAGTTGCTTAAATGGAT GGACAGCTATCATTGGACAACCAAATTGTTACTTCATCACCGATCTGCAA CCTCTCCTCAAGTACCAACTACAGCAATACTGTCAATCGATTTACGGGCG GGTCGCAGTACCTCATGATTTTCAAGCTGTTACTCAATTCATGCGTCtca tattgaaaaattttgtggaGAATCGTTCACATCATCAAATTGAAGCAGAT ATTAAAGAGATAATTAAAAATGGAGACGACTTTTTAGCGAGAGGTTTTCC ACTTTGTGAAAGACCCAAAACTGAAGTTACTGGTAGATACCCGTGGACTA AATGGCCTAAAGGCACTTATGGTTTGCCAATGTCCCGCACAGGCTGCCCT GTACAAAACCATTTCGAATGGAGAGCAGGTTCATATGTACAGAATACAGA GAACGATAGCAACGCAAACGAAGCATCACATGACCTTCATCTCCATGGCA ATGTAAATAAAGCTGAAGTTACTGGTAGATACCCGTGGACTAAATGGCCT AAAGGCACTTATGGTTTGCCAATGTCCCGCACAGGCTGCCCTGTACAAAA CCATTTCGAATGGAGAGCAGGTTCATATGTACAGAATACAGAGAACGATA GCAACGCAAACGAAGCATCACATGACCTTCATCTCCATGGCAATGTAAAT AAAGGCAACATCACAAGTCATTATTGCATCAAGACGGATCCAGTAGGAAA TACGTCCTGGCCTGATGGGCGGTATTGTATCTACCGTAAAGGCGGTAAAT GTCCGGATAATATGGTGTCTAGTGCGATCTTTTGGGATGATGAAGATACA AACAATAGAAATAAAGGCAACATCACAAGTCATTATTGCATCAAGACGGA TCCAGTAGGAAATACGTCCTGGCCTGATGGGCGGTATTGTATCTACCGTA AAGGCGGTAAATGTCCGGATAATATGGTGTCTAGTGCGATCTTTTGGGAT GATGAAGATACAAACAATAGAAATAAAGCGGACGGCGTGCATCCAGACGG TATGTTCAAAGCAGACACCATCATTCAATTTTGTTGCATGGATAGACCGT TGAATAAGCGGACGGCGTGCATCCAGACGGTATGTTCAAAGCAGACACCA TCATTCAATTTTGTTGCATGGATAGACCGTTGAATAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000109_pilon | genome | sc0000109_pilon:1044095..1052356 + |
Properties
| Property Name | Value |
| Aaloc | 1342-1419:8185 |
| Aaloc | 1180-1338:7341 |
| Aaloc | 988-1176:6796 |
| Aaloc | 703-984:4559 |
| Aaloc | 562-699:3662 |
| Aaloc | 286-558:2770 |
| Aaloc | 163-282:2416 |
| Aaloc | 1-159:1 |
|