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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:1008687..1012006+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038074 ID=XLOC_038074|Name=XLOC_038074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3320bp|location=Sequence derived from alignment at sc0000109_pilon:1008687..1012006+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCCTTACAGGGTTTATCAATTCAAAAGAAAAGGTTTGGAAAGGAGA
GAGATTTTAACAATTGAAATCCTTATAATTACGTAATTTTCCTCTGAGAA
TCCATAACTTAGATTACAGTTTTCGAGCTAATTATTTTAGAAATAAAGGG
TTGATTTTTGTACTTTTCGTAATCCAAAGGACACTATTTTGACTTAAATA
TACCACAAATACGATACTAAACTTGTTATTGTACTTTCTCTACTCGAATC
TAAAAACACAAAATACATCCAAGTTCACCTTCTCACCAGGCTAACCCCTA
GgtgaaatatatattttataccAAGGTTAGCAGAACTGTACTCTTGATTT
TgttcttctttaaattttcagaaacaGACCAAAATGCAAGTTCAAGACAG
CAAAATGCAATGGGATCCAATATGGGTGTAAGAATGTGCTTTATTTTGTA
TGTATTGAAATCTATGCTGCAAGGTTATTCAAAGCTtttccaaaaacaaa
aatataaaattaaaatgaatattttcttcttttttacagCAAAGCTCACA
GATGCCTGGAGCAAGCCCTATCTACCCTGGTACGTATTATGAAGCATCCC
CTttgtaatgtttttgaaatagaaaCACAACTACTgaaaagtatttttgt
ctaCTGCATATCTTTCTTTTCTGTGAGCAGCTAAAATCCAAGTTAAGCAG
TTGAAGCTTTTGATTAAAATCCATTTCAACCCATCAAATGCCATCACTAA
CTTTCAAATGCGCATATACATTCAAACTATACAAAACATATCCACTTAGT
TTTTCATCCGGGCTGAGGGTaaaaaaaCAGGTCGCACGTGCAAAGTGCTC
TCAGGCTCAGACCTACgggtccagaaaaaaaattcaaccatCTCATTTTC
CCAGTGGCACTTAATGAGTAAAACAAGGATCTTTTTTGCCGTGGCTGGTT
ATTCTAGCTATTTGGCTGCGAGCATccccaaaatttattttgatataggg
AATGCGTTTTGTGTATGAAATTCCTGTCTGAGAAGTACCCCAGATTTGAG
TGAGGCAAAGTGTTTCAATTTATAGCGAACGAGTCGAGAAAGTTTCAACA
AGCTTATTCATCACTACCAACTAAGTAAGTGGAGTAGACTTTTAAATATG
ACCGACCTTGTAGTGGTAAATGATCTAGAGTACGTTTAGCACTTCACCTT
AGCAATCACCCTTCATCATCAGATCCCAAATAGAAAATGTGATGAGACTC
ATTTACTCCCAGGTTCGCTGACTTAAACTCACTTCATCTTTTAGGAGCCT
ACAGAGACCCATCCAGCTACCaggtaaaactttttgtttttagtttCATT
AATAAGCCTTCGTTTACCTCTCACAAATCTCATTTCTTCTTAAAAAAGCC
TAATTATATACTAAACTTTAAAATGGAACATGTTTCGTTTAGTTCTATAA
AAGTTGCCACGGGACCTAAgacttggccccctactattcATTATATCTGA
CCATTATTTTTGTTGTGTTAGTGAGAATAACCTTTATGTAATGAAGGATT
TCACTTTAACCTTTGATATACCGTACCCTATCAATACATATAGATAACTC
ATTCTCATTTTTTCAGTTCCCAGGTGGCATGGACCCATCTCAACTCAGCC
CTGATATTGAAATTCGTAAGTTCACTTACAGGACAACTTTTACCATAGCA
CTTCAGATTATTAAATTCGCTGGATACTAAATTAAACAGTTATCATTTGA
TCATGTACTTCTTTCAAGGAATTCTATTTATAAGAAATCTATGTTTTCCC
TTTTGTCCGATTCGTTTCACAATTATGATGAAtacttgttgttttttctt
tcagcTGATTTCGACATTGACGTAAGTTGACCATAAATTTTCAGTTCCAG
TTCCCTCTGAAATTTTGTTCTTTCATATTTGCTTTTCCACTTATCCCTAT
CCTTAACTTTTGGTTAAAATTGATGTCGAAAAGGGCAAACCTAATATGAT
AAGGAcctataatatatatttttttacaattaaTTATTGTATCTGTTTCT
TTTCTCTTGTTGTTGTAGAAGTCATATAACTTTCCAAAATTCCATATTTT
ATCTAAAAACCCCTGTTATTACTTTACAGGAATTTCAAACATCTTCTGGT
ATGCTACCAACAGACAATTTCAACCCACCTGACCCTAACCTAGCAGCTCT
ACAACAATCCAATATGCAGACACCTGGTAGTCCAGCTGCTTCACAAATGC
AACCATCACCACAAATGCAACCTCAGGCAACACCGGAATTGACAACTCTT
CAACCAGCTTTAAACCAAAACTCAAGTAGGTGTAGCGGATGAATCTTCAC
ATTTTAAAACGCCGACGATGTTTTCTTGCTCTTCCTGTGGGAGGAATTTC
CaggcaaaaattgaattttttggtttttgtaaaACCCTCGAGGGTCGGTT
TTCAAGTTTTCTACTGGTCGGAGAGGGTCAAAAAAGATTTAACATGTTCG
GGTTGAAAGGGATCCTTTCTATACCAATGATAGTTCCTTAGCATCAAGGG
CTTGCCAAATACTGACTCGCCTCATTTTTCTATTTAATGTTCATTCatat
ttaaagtaattttttttgtttttaatgttattattttcaacaaTTCATTT
TGTTACAGTCACCGCTGTCAAAGTCAAGCTCTTCTACAAAGGTGATGAAA
TGGGCGAGAAAGTCGTTGACAACCCGCGCGGTCTACGTATCGCTTTCAAT
CCGCCACCGCCCCTCCCTGATGATGTGGTCCGCCAAGACGCCTCTGAAGT
CGTGTCCCACATTTATGGGCCATTTCAAGCTGAGCAAATTTATTTCCCTC
CTAGTCAGAACCCAGAGATTATCAATGTTCTAGAAATGACCAAAAGAGGG
CTCGTGTTACAGGCTAGGAATGGAGAAATATTGGCAACCCGTCTATGTCG
AGCTAAGATTTTTTATTCCGACTCGACGACGCCCAGTATAGAGCCTCGAG
AGTTACCTCGTGAGCACACGACACCTATTTTCGATTACGTAAATGACTTT
TTACCAAAGTTTAAGCAATACGTTCAAGGGCAAGGTCCACTCCCGACCGC
TGAGCGTTATTTTTCGTTCGCGCAACGGTGCCCGAATCAGCAATCCATCA
GTAACCTGTTTGTGTACGTCAGCGTGACACATGTACTCGCGCAACGGCAA
ATCAATCAAGTGCAATCACAAACCAATGATATCTTAGTATCCGATCCTAA
CATGTTAGACTTTATCGCCGCACAAATTGAAGGCTTAAGCATTGATAACA
CTGGAATTAATCCACTTTAG Coding sequence (CDS) from alignment at sc0000109_pilon:1008687..1012006+ >XLOC_038074 ID=XLOC_038074|Name=XLOC_038074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2136bp|location=Sequence derived from alignment at sc0000109_pilon:1008687..1012006+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCCTTACAGGGTTTATCAATTCAAAAGAAAAGATGATCCTTACAGG
GTTTATCAATTCAAAAGAAAAGaaacaGACCAAAATGCAAGTTCAAGACA
GCAAAATGCAATGGGATCCAATATGGGTaaacaGACCAAAATGCAAGTTC
AAGACAGCAAAATGCAATGGGATCCAATATGGGTCAAAGCTCACAGATGC
CTGGAGCAAGCCCTATCTACCCTGCAAAGCTCACAGATGCCTGGAGCAAG
CCCTATCTACCCTGGAGCCTACAGAGACCCATCCAGCTACCagGAGCCTA
CAGAGACCCATCCAGCTACCagTTCCCAGGTGGCATGGACCCATCTCAAC
TCAGCCCTGATATTGAAATTCTTCCCAGGTGGCATGGACCCATCTCAACT
CAGCCCTGATATTGAAATTCGAATTTCAAACATCTTCTGGTATGCTACCA
ACAGACAATTTCAACCCACCTGACCCTAACCTAGCAGCTCTACAACAATC
CAATATGCAGACACCTGGTAGTCCAGCTGCTTCACAAATGCAACCATCAC
CACAAATGCAACCTCAGGCAACACCGGAATTGACAACTCTTCAACCAGCT
TTAAACCAAAACTCAAGAATTTCAAACATCTTCTGGTATGCTACCAACAG
ACAATTTCAACCCACCTGACCCTAACCTAGCAGCTCTACAACAATCCAAT
ATGCAGACACCTGGTAGTCCAGCTGCTTCACAAATGCAACCATCACCACA
AATGCAACCTCAGGCAACACCGGAATTGACAACTCTTCAACCAGCTTTAA
ACCAAAACTCAATCACCGCTGTCAAAGTCAAGCTCTTCTACAAAGGTGAT
GAAATGGGCGAGAAAGTCGTTGACAACCCGCGCGGTCTACGTATCGCTTT
CAATCCGCCACCGCCCCTCCCTGATGATGTGGTCCGCCAAGACGCCTCTG
AAGTCGTGTCCCACATTTATGGGCCATTTCAAGCTGAGCAAATTTATTTC
CCTCCTAGTCAGAACCCAGAGATTATCAATGTTCTAGAAATGACCAAAAG
AGGGCTCGTGTTACAGGCTAGGAATGGAGAAATATTGGCAACCCGTCTAT
GTCGAGCTAAGATTTTTTATTCCGACTCGACGACGCCCAGTATAGAGCCT
CGAGAGTTACCTCGTGAGCACACGACACCTATTTTCGATTACGTAAATGA
CTTTTTACCAAAGTTTAAGCAATACGTTCAAGGGCAAGGTCCACTCCCGA
CCGCTGAGCGTTATTTTTCGTTCGCGCAACGGTGCCCGAATCAGCAATCC
ATCAGTAACCTGTTTGTGTACGTCAGCGTGACACATGTACTCGCGCAACG
GCAAATCAATCAAGTGCAATCACAAACCAATGATATCTTAGTATCCGATC
CTAACATGTTAGACTTTATCGCCGCACAAATTGAAGGCTTAAGCATTGAT
AACACTGGAATTAATCCACTTTAGTCACCGCTGTCAAAGTCAAGCTCTTC
TACAAAGGTGATGAAATGGGCGAGAAAGTCGTTGACAACCCGCGCGGTCT
ACGTATCGCTTTCAATCCGCCACCGCCCCTCCCTGATGATGTGGTCCGCC
AAGACGCCTCTGAAGTCGTGTCCCACATTTATGGGCCATTTCAAGCTGAG
CAAATTTATTTCCCTCCTAGTCAGAACCCAGAGATTATCAATGTTCTAGA
AATGACCAAAAGAGGGCTCGTGTTACAGGCTAGGAATGGAGAAATATTGG
CAACCCGTCTATGTCGAGCTAAGATTTTTTATTCCGACTCGACGACGCCC
AGTATAGAGCCTCGAGAGTTACCTCGTGAGCACACGACACCTATTTTCGA
TTACGTAAATGACTTTTTACCAAAGTTTAAGCAATACGTTCAAGGGCAAG
GTCCACTCCCGACCGCTGAGCGTTATTTTTCGTTCGCGCAACGGTGCCCG
AATCAGCAATCCATCAGTAACCTGTTTGTGTACGTCAGCGTGACACATGT
ACTCGCGCAACGGCAAATCAATCAAGTGCAATCACAAACCAATGATATCT
TAGTATCCGATCCTAACATGTTAGACTTTATCGCCGCACAAATTGAAGGC
TTAAGCATTGATAACACTGGAATTAATCCACTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109_pilon | genome | sc0000109_pilon:1008687..1012006 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 409-1068:2661 |
| Aaloc | 211-405:2130 |
| Aaloc | 163-210:1618 |
| Aaloc | 133-159:1295 |
| Aaloc | 94-132:541 |
| Aaloc | 37-90:372 |
| Aaloc | 1-36:1 |
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