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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000379_pilon:135305..137861- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038060 ID=XLOC_038060|Name=XLOC_038060|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2557bp|location=Sequence derived from alignment at sc0000379_pilon:135305..137861- (Clytia hemisphaerica_ch_hm2_pilon)
ACACCTCCACGATCAACGAAAATGACAACAACTTTACGTTCTTCAGCAAC
AGAAAACACTGAGCTAAAACCAACAACAAAACAAACACCCAATACAGAAA
TAACAACATCCTCGTCCAGGACGACTACAGCAGAACCTGCTACAAGGCAA
CCTACCCCAACGCAAAAGACACGACCTACAACAAGACAGACTCAAGCACC
GATTTCTACAACAAAATCGACAGTAAGACCAGCAACAGACAATACGAAAA
CAACAACACAAGACCCCAACGTCACTAAAAACACTACTACAACAACTTCT
GAAACAACAGAAGGGACTGGTCAATCAACACCTACAACAGATAAGTCATC
CACAACCACATCAATCAGAACCATACCGACCGACGACAGTCTACCATTCA
CCATTTCAAAATTCATCAAATACAAGATCGGAAAACTCTCAGATCTTTAT
GGTCTTCCTTTTAAATCATTGACCGAAATCTTTGCAGCTCTGAACACGTA
CAATATCAAGAAAGTCATCAAGACAGGTGTCCGGTACCAAGCTTGTCCGA
AATTATATGAAAAATCAGTTAAAACAGCTGCGGATAAATTACTGAAGACA
TTGAAACGACAAATCAAACAATTTAAACGAAAAGATAATCAAGTATGTTT
TGGTAATCGAAATGGGAAATATGATTGCGATGAATGTTGTAAACCTTCAG
TTAAGAAAAACGTGAGTGGGTTTTGTCAATTCTGTGTTTGTGTCAATGAT
GTTTCATTTATTGGTGAGCAAATTTCTATAGCTTCAAGTAGCACCAAATC
TTCCGAGACTGAGAGTATTGTTACTGCAACAACTTCCTCAAAAGATACAG
ATGTTCATACAACAACTAATACTCCAGCAAAAATGACCACACCTCAAACT
TCAGATCATTCTTCTCAAGAAGAGAACATCTCTGGTGAAAACTCGGCAAC
ATTGATAGCATCAGAAGCAGAATCAACTCCACATGCTTCAATTGGCAGTA
ACAATGAGCGTTACAGAAGACGACGTTCTACAAATGGTAAGAATTATGGT
ACTTTTTTTTTAGTGAGTCTCATAACATTCATTACATCTAGATCGTACTT
AAACGATACGCATTAAATTGCAAAGAATACTTTATATCTTAAATACGCTA
TATGTTTTTTATTTCTTAAGCATAGGGTTCATTTGAGATGAGGCTGGACT
TATGCTTAAATCTCTTTTGTTCTATAACAATAAAGATCTATTGTTATATC
AGCTTAAACATTATCTTAATAGATATAAAAACGACTTCGGTGAACGTTAT
TTTAAAATCTCGTGCATTTCTCATAGGGATGACGGAAGAAGAGCAAGCTG
TCCTTGAAGAATTGAATCTTCACAACACTTTGGGAGCACGTGCTACACTG
AGAACAAATTGTCTGGAGAGGGGGAGTGGGAACGACCGAAACACCGTCAA
CATGTGTCGATCATGTCAATATGATATCAACCTACCAAGCGAGTAAGTTG
CCTTTACTACTTTCTTATATGGTGCAAGGTTTCTTTAAAGATCTTTGCAA
AAAATAGGTTTAAAGAAAAGATTCTTCTGTTAAACCAGGTATTTTTTGAG
AAACTCTTTTACCAGTAGATTACTCCATCATTGTTTAATTTCATCTTTTA
ATACCAGTGGTCCCTGGGAGAGACAATGGTTCAGCTCCATGGAAGCTGAG
TCATTATTCCATGACCAGTCACTTAAAGGTTTTATCTTTACATAAGTGTT
CCCGTTTCATATATTTCATATCATTAAAATGTCTCCCTATTGTTATATTA
TGGTGATATAAGCAGAAAAGTGTTTTTCTTTTCCTCTTTCTGGCCAATGT
TAAAAAGCTTGCGAATTAAAATGAGTAAGCAAACGATATGACTCTTATTT
AGAAACAAAACCTTTAAAATATTAGTGATTTTACTTGACTCCCATCTCCC
CTTGATCTCCCATTTTCTATCGATTCTTATTATTATAGTTTACTGAAATA
GAATCTCCGATCCGCAACAGGAAAATTGCGAAGGAGTACAGTTGAGTCTC
TTCATAACTCGAACACGCACGGGGAACACAAATTTGTTCGAGTTAAGGAA
ATTTCGTATTATGAAGTAAGGTTTATAAGTCATTGTTAACTGAAGGGACG
AGAAAACTTGCTCGAATTGAGGAGACATTCGAGTTATAGAGGTTCGAGTT
AAAGAGACTCTTCTGCAGACTCTTCTTCTTTATATATTTTGTATACCATG
TGTGCTCTGAAATTATTTTATGGATTGTTTCTCTATAAAAATAATTTTGA
CTTGTTACTTTCCATATTTTTTACTTTCACTTATTCTTTCTTTCAGTCAT
TACCCAGAATCCTTCATTCATACCACGTGCGGGAACGGTGAAGATATTTC
ATGTTTCACCAGTGAAGGTGTTTGCTCTAAAGTCATTGTCGTCAAACCTG
TTTTGAAATGGAAAAATGATGGTGGTTATCAAGAATTTCATGTTCCAGTA
ACAATCGGATGTGCTTGTGAAATTATCAAGGGAAGCATTATGGAGGTTTT
TGTATAA Coding sequence (CDS) from alignment at sc0000379_pilon:135305..137861- >XLOC_038060 ID=XLOC_038060|Name=XLOC_038060|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2826bp|location=Sequence derived from alignment at sc0000379_pilon:135305..137861- (Clytia hemisphaerica_ch_hm2_pilon)
ACACCTCCACGATCAACGAAAATGACAACAACTTTACGTTCTTCAGCAAC
AGAAAACACTGAGCTAAAACCAACAACAAAACAAACACCCAATACAGAAA
TAACAACATCCTCGTCCAGGACGACTACAGCAGAACCTGCTACAAGGCAA
CCTACCCCAACGCAAAAGACACGACCTACAACAAGACAGACTCAAGCACC
GATTTCTACAACAAAATCGACAGTAAGACCAGCAACAGACAATACGAAAA
CAACAACACAAGACCCCAACGTCACTAAAAACACTACTACAACAACTTCT
GAAACAACAGAAGGGACTGGTCAATCAACACCTACAACAGATAAGTCATC
CACAACCACATCAATCAGAACCATACCGACCGACGACAGTCTACCATTCA
CCATTTCAAAATTCATCAAATACAAGATCGGAAAACTCTCAGATCTTTAT
GGTCTTCCTTTTAAATCATTGACCGAAATCTTTGCAGCTCTGAACACGTA
CAATATCAAGAAAGTCATCAAGACAGGTGTCCGGTACCAAGCTTGTCCGA
AATTATATGAAAAATCAGTTAAAACAGCTGCGGATAAATTACTGAAGACA
TTGAAACGACAAATCAAACAATTTAAACGAAAAGATAATCAAGTATGTTT
TGGTAATCGAAATGGGAAATATGATTGCGATGAATGTTGTAAACCTTCAG
TTAAGAAAAACGTGAGTGGGTTTTGTCAATTCTGTGTTTGTGTCAATGAT
GTTTCATTTATTGGTGAGCAAATTTCTATAGCTTCAAGTAGCACCAAATC
TTCCGAGACTGAGAGTATTGTTACTGCAACAACTTCCTCAAAAGATACAG
ATGTTCATACAACAACTAATACTCCAGCAAAAATGACCACACCTCAAACT
TCAGATCATTCTTCTCAAGAAGAGAACATCTCTGGTGAAAACTCGGCAAC
ATTGATAGCATCAGAAGCAGAATCAACTCCACATGCTTCAATTGGCAGTA
ACAATGAGCGTTACAGAAGACGACGTTCTACAAATGACACCTCCACGATC
AACGAAAATGACAACAACTTTACGTTCTTCAGCAACAGAAAACACTGAGC
TAAAACCAACAACAAAACAAACACCCAATACAGAAATAACAACATCCTCG
TCCAGGACGACTACAGCAGAACCTGCTACAAGGCAACCTACCCCAACGCA
AAAGACACGACCTACAACAAGACAGACTCAAGCACCGATTTCTACAACAA
AATCGACAGTAAGACCAGCAACAGACAATACGAAAACAACAACACAAGAC
CCCAACGTCACTAAAAACACTACTACAACAACTTCTGAAACAACAGAAGG
GACTGGTCAATCAACACCTACAACAGATAAGTCATCCACAACCACATCAA
TCAGAACCATACCGACCGACGACAGTCTACCATTCACCATTTCAAAATTC
ATCAAATACAAGATCGGAAAACTCTCAGATCTTTATGGTCTTCCTTTTAA
ATCATTGACCGAAATCTTTGCAGCTCTGAACACGTACAATATCAAGAAAG
TCATCAAGACAGGTGTCCGGTACCAAGCTTGTCCGAAATTATATGAAAAA
TCAGTTAAAACAGCTGCGGATAAATTACTGAAGACATTGAAACGACAAAT
CAAACAATTTAAACGAAAAGATAATCAAGTATGTTTTGGTAATCGAAATG
GGAAATATGATTGCGATGAATGTTGTAAACCTTCAGTTAAGAAAAACGTG
AGTGGGTTTTGTCAATTCTGTGTTTGTGTCAATGATGTTTCATTTATTGG
TGAGCAAATTTCTATAGCTTCAAGTAGCACCAAATCTTCCGAGACTGAGA
GTATTGTTACTGCAACAACTTCCTCAAAAGATACAGATGTTCATACAACA
ACTAATACTCCAGCAAAAATGACCACACCTCAAACTTCAGATCATTCTTC
TCAAGAAGAGAACATCTCTGGTGAAAACTCGGCAACATTGATAGCATCAG
AAGCAGAATCAACTCCACATGCTTCAATTGGCAGTAACAATGAGCGTTAC
AGAAGACGACGTTCTACAAATGGGATGACGGAAGAAGAGCAAGCTGTCCT
TGAAGAATTGAATCTTCACAACACTTTGGGAGCACGTGCTACACTGAGAA
CAAATTGTCTGGAGAGGGGGAGTGGGAACGACCGAAACACCGTCAACATG
TGTCGATCATGTCAATATGATATCAACCTACCAAGCGAGGATGACGGAAG
AAGAGCAAGCTGTCCTTGAAGAATTGAATCTTCACAACACTTTGGGAGCA
CGTGCTACACTGAGAACAAATTGTCTGGAGAGGGGGAGTGGGAACGACCG
AAACACCGTCAACATGTGTCGATCATGTCAATATGATATCAACCTACCAA
GCGATCATTACCCAGAATCCTTCATTCATACCACGTGCGGGAACGGTGAA
GATATTTCATGTTTCACCAGTGAAGGTGTTTGCTCTAAAGTCATTGTCGT
CAAACCTGTTTTGAAATGGAAAAATGATGGTGGTTATCAAGAATTTCATG
TTCCAGTAACAATCGGATGTGCTTGTGAAATTATCAAGGGAAGCATTATG
GAGGTTTTTGTATAATCATTACCCAGAATCCTTCATTCATACCACGTGCG
GGAACGGTGAAGATATTTCATGTTTCACCAGTGAAGGTGTTTGCTCTAAA
GTCATTGTCGTCAAACCTGTTTTGAAATGGAAAAATGATGGTGGTTATCA
AGAATTTCATGTTCCAGTAACAATCGGATGTGCTTGTGAAATTATCAAGG
GAAGCATTATGGAGGTTTTTGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000379_pilon | genome | sc0000379_pilon:135305..137861 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1210-1419:211 |
| Aaloc | 1045-1206:1230 |
| Aaloc | 199-1041:2366 |
| Aaloc | 4-195:2558 |
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