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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000379_pilon:128142..130400- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_038059 ID=XLOC_038059|Name=XLOC_038059|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2259bp|location=Sequence derived from alignment at sc0000379_pilon:128142..130400- (Clytia hemisphaerica_ch_hm2_pilon)
TCTTTTGACACAAAAATGGTAAGTCGAACTCATTATAAGAGTACCTAAAT
AACGGGGGGGGGGGTCTGTGACACTAGTCTTAGTAACTATTCATAAATCC
TACAAACGAAAATAGATTTTAAGAAATTCTTTATTCCTCTATCATTCACC
TAGCCGTAACGTACACGTTTTTTTTTTTTTTAAAGAAACTAGTTTTACCA
AGCAGCCTCAATGTTTCTTAAGAAATCGGCCTTTTGAGCCTTAAATGTTT
CTAACATGTTTCTAAACTTTTTGACATAATCAGCCTCATGGAAGGCTGCA
TTGGAAGGTTCTTAAAAAAACCGAATTAAAAATCGTTATTTTCTCATTCT
CAGCCTCAGCATGTTTCTTAGATGTTTTTTTTAGTTTTTAGGCATTCTGA
GCCTTATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAACGTGTAGTGTA
TAAAAAAATATATATTACTTTTTTTACAGAATAATCAGAGCAAAAGTGAT
GAAGAGAAAATTATCAGAAAGAGGTACGATCTATGTTTCAAACCTTGTTT
TTGAGTTTCCAAATCTTTAATTGAAGACTGATCAGGAAAGACCTGGAAAT
CTTGCGAACGAGGCTGTTTTTTTAAAGTTGAGGAAAATGATAGTTTAAGG
GAGGCTTTACAAATAATATAATACCGAGCCTAATAGATTTTGACTCCAAA
ATACCTTATATTTTATACTTTATCGTCGGCAAAAATTGATTTGAAAATCG
TTTTACCGTTAAATTTTATAGCTGACGTTTTTTTTTGCCCGCGATAATTT
TTGCCGGTTAATATTTTTTACCAAATGATTATCGGTTACTTTGAAAATTT
TTTTGTTTAAAAATTTTTTAATACTTTCTTGTTAAATTATTCCTGCTTAA
AGGACAATAATTGCAATAATTGCTCAGTTTATCTTTGTTTTTCAGCCTTG
ATTTCTCTATAAGGCCGATGTTAAGCCAGAAAAAAATTTATCGGCAAAAA
CTGTTCGTCAGTAAAAAGTGACGAAATTTGAATGTTTTTTACCTAAGAAT
TTTCTACTGATAAGGTACTTGCTTCTTTTTCTTCAAAGTAATAATATTCA
TTTATCTTTTAATCGTCCTAGGATGGCAATAAGAGACTTGGAAGAAGATA
AGCATCGTAAGAGAAGATATGCTTTTTTGAAAGCTTTCCACGTCATCAAA
AATCTTCCACCTGAGAACGAGGACTCTTATTGGAAAATTGCGTCCTTTAA
TGGTCAGCCTTTTACACATCCAAGAACAACTCCTCCAGAATCACTTAAAA
TGTGGGGCGCTGACAGCCAACACCAAAATGTTCTTTTCCTCCCCTGGTAC
AGAGCTTATCTTTTACATCTTGAGGAGGCTCTTGTGAGAAATGCCCCTGA
AGATGGAGATTTAGTTGCTTTGCATTACTGGGATGAAACATGGAAAGAGA
TAATCAAAAAGGGTGAACCACCTTTGCCAAATCTCTTGGTAAAAGAATTT
GTGGAGATTGATGACGATGGAACCACGATTTCAAACCCTCTTCTCGGATT
CACTCTTCCTAAAGCAATACCTTTATCCCAAGCAACATCAAAATATGTCA
AACCCGCAGGTTATACAACATGTCGTTACCCATACTCAGGGCTCAGGAAG
CCTGAAAATCCACTTCAAGAAACCTTCAACGCCAAAATCCAAAATGATTA
TGTCAATCATAATCTCCCAAAAAGTCCAACTTTTTATTTGCAAGAAAATA
TCACACATGCGTTAAAGCATTCCATCCACAAGAGTTATAAGGATTGCTTG
GAAGTTGAAAAATATAACAAGTTCTCAAACATCCAGTCAGGTAATCACAG
TGTTGAGCTGGCCAGTATCCAGATGCTTCAAGCGTTAGGTGGGACTGGTG
AGTTTTCCTTAATTGCTGGTTCCCATGGTGATTTAGGATCAAACGAAATG
GCGGCTTTCGATCCGCTTTTCTTCTTGCATATGTCAAATGTAGATCGCGT
TTTTTGGCTTTGGTATGAGAAATGGGCTCATAACGTAGATATGGGTATGA
GTAAGCCAGATAAAGGGGAGCAACCCAAATATGGTCAAGGACCCAGTCCA
AACCAAACTGGGAATGAAGTGTTAACCGCAGATACGAATTTGTACCCGTT
CAAGAAGGCAGGAAAATACTTGAATAGGAATGAGCTTATGGATATCAAGG
AACTAGGTTACCACTATGAGAGAGGTTCTATGACCTTACCTGACCCCCCT
CATGATTAA Coding sequence (CDS) from alignment at sc0000379_pilon:128142..130400- >XLOC_038059 ID=XLOC_038059|Name=XLOC_038059|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2400bp|location=Sequence derived from alignment at sc0000379_pilon:128142..130400- (Clytia hemisphaerica_ch_hm2_pilon)
TCTTTTGACACAAAAATGTCTTTTGACACAAAAATGAATAATCAGAGCAA
AAGTGATGAAGAGAAAATTATCAGAAAGAGAATAATCAGAGCAAAAGTGA
TGAAGAGAAAATTATCAGAAAGAGGATGGCAATAAGAGACTTGGAAGAAG
ATAAGCATCGTAAGAGAAGATATGCTTTTTTGAAAGCTTTCCACGTCATC
AAAAATCTTCCACCTGAGAACGAGGACTCTTATTGGAAAATTGCGTCCTT
TAATGGTCAGCCTTTTACACATCCAAGAACAACTCCTCCAGAATCACTTA
AAATGTGGGGCGCTGACAGCCAACACCAAAATGTTCTTTTCCTCCCCTGG
TACAGAGCTTATCTTTTACATCTTGAGGAGGCTCTTGTGAGAAATGCCCC
TGAAGATGGAGATTTAGTTGCTTTGCATTACTGGGATGAAACATGGAAAG
AGATAATCAAAAAGGGTGAACCACCTTTGCCAAATCTCTTGGTAAAAGAA
TTTGTGGAGATTGATGACGATGGAACCACGATTTCAAACCCTCTTCTCGG
ATTCACTCTTCCTAAAGCAATACCTTTATCCCAAGCAACATCAAAATATG
TCAAACCCGCAGGTTATACAACATGTCGTTACCCATACTCAGGGCTCAGG
AAGCCTGAAAATCCACTTCAAGAAACCTTCAACGCCAAAATCCAAAATGA
TTATGTCAATCATAATCTCCCAAAAAGTCCAACTTTTTATTTGCAAGAAA
ATATCACACATGCGTTAAAGCATTCCATCCACAAGAGTTATAAGGATTGC
TTGGAAGTTGAAAAATATAACAAGTTCTCAAACATCCAGTCAGGTAATCA
CAGTGTTGAGCTGGCCAGTATCCAGATGCTTCAAGCGTTAGGTGGGACTG
GTGAGTTTTCCTTAATTGCTGGTTCCCATGGTGATTTAGGATCAAACGAA
ATGGCGGCTTTCGATCCGCTTTTCTTCTTGCATATGTCAAATGTAGATCG
CGTTTTTTGGCTTTGGTATGAGAAATGGGCTCATAACGTAGATATGGGTA
TGAGTAAGCCAGATAAAGGGGAGCAACCCAAATATGGTCAAGGACCCAGT
CCAAACCAAACTGGGAATGAAGTGTTAACCGCAGATACGAATTTGTACCC
GTTCAAGAAGGCAGGAAAATACTTGAATAGGAATGAGCTTATGGATATCA
AGGAACTAGGTTACCACTATGAGAGAGGTTCTATGACCTTACCTGACCCC
CCTCATGATTAAGATGGCAATAAGAGACTTGGAAGAAGATAAGCATCGTA
AGAGAAGATATGCTTTTTTGAAAGCTTTCCACGTCATCAAAAATCTTCCA
CCTGAGAACGAGGACTCTTATTGGAAAATTGCGTCCTTTAATGGTCAGCC
TTTTACACATCCAAGAACAACTCCTCCAGAATCACTTAAAATGTGGGGCG
CTGACAGCCAACACCAAAATGTTCTTTTCCTCCCCTGGTACAGAGCTTAT
CTTTTACATCTTGAGGAGGCTCTTGTGAGAAATGCCCCTGAAGATGGAGA
TTTAGTTGCTTTGCATTACTGGGATGAAACATGGAAAGAGATAATCAAAA
AGGGTGAACCACCTTTGCCAAATCTCTTGGTAAAAGAATTTGTGGAGATT
GATGACGATGGAACCACGATTTCAAACCCTCTTCTCGGATTCACTCTTCC
TAAAGCAATACCTTTATCCCAAGCAACATCAAAATATGTCAAACCCGCAG
GTTATACAACATGTCGTTACCCATACTCAGGGCTCAGGAAGCCTGAAAAT
CCACTTCAAGAAACCTTCAACGCCAAAATCCAAAATGATTATGTCAATCA
TAATCTCCCAAAAAGTCCAACTTTTTATTTGCAAGAAAATATCACACATG
CGTTAAAGCATTCCATCCACAAGAGTTATAAGGATTGCTTGGAAGTTGAA
AAATATAACAAGTTCTCAAACATCCAGTCAGGTAATCACAGTGTTGAGCT
GGCCAGTATCCAGATGCTTCAAGCGTTAGGTGGGACTGGTGAGTTTTCCT
TAATTGCTGGTTCCCATGGTGATTTAGGATCAAACGAAATGGCGGCTTTC
GATCCGCTTTTCTTCTTGCATATGTCAAATGTAGATCGCGTTTTTTGGCT
TTGGTATGAGAAATGGGCTCATAACGTAGATATGGGTATGAGTAAGCCAG
ATAAAGGGGAGCAACCCAAATATGGTCAAGGACCCAGTCCAAACCAAACT
GGGAATGAAGTGTTAACCGCAGATACGAATTTGTACCCGTTCAAGAAGGC
AGGAAAATACTTGAATAGGAATGAGCTTATGGATATCAAGGAACTAGGTT
ACCACTATGAGAGAGGTTCTATGACCTTACCTGACCCCCCTCATGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000379_pilon | genome | sc0000379_pilon:128142..130400 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 64-1200:1138 |
| Aaloc | 19-60:1781 |
| Aaloc | 1-18:2260 |
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