XLOC_038032 (mRNA) -

Overview
NameXLOC_038032
Unique NameXLOC_038032
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000066_pilon:96026..97177+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038032 ID=XLOC_038032|Name=XLOC_038032|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1152bp|location=Sequence derived from alignment at sc0000066_pilon:96026..97177+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAATATCACCAATTATTAATGGTAAATAAAAAAGTTgcagtttttg tttaaaaaatcctTAGTAACCCCCTTACTGCTACAGTAACCCTACAGTAG CCCCACAGTAGCATATGCAGATGGAAAGGCaaaagttaatttcaaaatta ttttattctatttccacttgttttattattttatttaaagtttataccaa aaatgtttttctttttttagatcaTTCTGTCTTAATTCGTAAACTTATAA AGAAGCAAAAAGCTTTAGAAGAAAGGATTGATAAACTAGcttctcaaaac aaaagaagaccACCCACAATAGGCATAAGATCAACAACAAGTGTAAGAAA GGGGTTATTCTGACTTTGGGAAGCTGATATTGGTGCAAAGCAAGGCGAAA TTTgtgcttttatcaaaataagaccattttaagaattttaatttttttac aattcaaAAATGCCAGCAACAACAAATTAATTCTCTTTGCAATCTGCCAA ATTAGTTTCCACAGCCAAATTTTGTTTCCCTCAAAAAGTTCTTCCTGTCA AATTTAGTTCCCCTATGAAATTTAGGGTAAAAGCTTTGTTTTCAGAATGA AGACTTTCTACTCATGTAATCTGTAAGGTTTTCATCACACGGAAACTTAA GGGGATCTGCTTATTTTCTATTGATTATGAATTGAAAACttgtcttttat cttttcccTGCCTCTCCGTGAGCTTTCCATAACCTTCAAAGTCTCTAGTA ATGTATCATTTTGAACGTTGTCTTTTCTTATAGAATTACATCAAGGTATG CTACAGCAGGCTATGCGAAAGACACAATCATAAATGGAACTTTGATTATG GGTATGATTATTCAGAAAATTGATCACCTTCGTAAAAATGATATAAGTAA TATTTTCTTTAAGATAAAGGGTGTATGCAGCAATATGTATTAAATAGACC tctaaagaaattttctttggattttggacagaaaaattgttttcattttt ttaaactgttCGGTCTTTCATTTGGGTATATACTTATTTCATTTATCATT TTGGTTTTCAGAGTGTGCTCCCAAGTTAATAAAGAAATCACAGAAAAACT TAAAGAGAACGTCATAGGGTTAGATAAAACCATAAGCAAAGACGAATTCA AA

Coding sequence (CDS) from alignment at sc0000066_pilon:96026..97177+

>XLOC_038032 ID=XLOC_038032|Name=XLOC_038032|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000066_pilon:96026..97177+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAATATCACCAATTATTAATGATGACAATATCACCAATTATTAATG
atcaTTCTGTCTTAATTCGTAAACTTATAAAGAAGCAAAAAGCTTTAGAA
GAAAGGATTGATAAACTAGcttctcaaaacaaaagaagaccACCCACAAT
AGGCATAAGATCAACAACAAGTatcaTTCTGTCTTAATTCGTAAACTTAT
AAAGAAGCAAAAAGCTTTAGAAGAAAGGATTGATAAACTAGcttctcaaa
acaaaagaagaccACCCACAATAGGCATAAGATCAACAACAAGTAATTAC
ATCAAGGTATGCTACAGCAGGCTATGCGAAAGACACAATCATAAATGGAA
CTTTGATTATGGAATTACATCAAGGTATGCTACAGCAGGCTATGCGAAAG
ACACAATCATAAATGGAACTTTGATTATGGAGTGTGCTCCCAAGTTAATA
AAGAAATCACAGAAAAACTTAAAGAGAACGTCATAGGGTTAGATAAAACC
ATAAGCAAAGACGAATTCAAAAGTGTGCTCCCAAGTTAATAAAGAAATCA
CAGAAAAACTTAAAGAGAACGTCATAGGGTTAGATAAAACCATAAGCAAA
GACGAATTCAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_038032XLOC_038032-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066_pilongenomesc0000066_pilon:96026..97177 +
Properties
Property NameValue
Aaloc217-306:1063
Aaloc148-213:784
Aaloc28-147:223
Aaloc1-24:1